Guide Gene
- Gene ID
- Mapoly0144s0001
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF08312] cwf21 domain; [PTHR23140:SF0] SUBFAMILY NOT NAMED; [PTHR23140] RNA PROCESSING PROTEIN LD23810P
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0144s0001 [PF08312] cwf21 domain; [PTHR23140:SF0] SUBFAMILY NOT NAMED; [PTHR23140] RNA PROCESSING PROTEIN LD23810P 0.00 1.0000 1 Mapoly0009s0102 [PTHR11567] ACID PHOSPHATASE-RELATED; [K13121] protein FRA10AC1; [PTHR11567:SF25] FRA10AC1 PROTEIN; [KOG1297] Uncharacterized conserved protein; [PF09725] Folate-sensitive fragile site protein Fra10Ac1 2.83 0.7670 2 Mapoly0005s0105 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 3.46 0.7727 3 Mapoly0020s0030 [PF15346] Arginine and glutamate-rich 1; [PTHR31711] FAMILY NOT NAMED 3.46 0.7491 4 Mapoly0024s0008 [GO:0003677] DNA binding; [KOG1793] Uncharacterized conserved protein; [PF08711] TFIIS helical bundle-like domain; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PTHR22908] MIDASIN-RELATED 8.94 0.7076 5 Mapoly0001s0322 [PTHR24022:SF20] PROGRAMMED CELL DEATH PROTEIN 7; [PTHR24022] COMPLEMENT C1Q-RELATED 10.49 0.7415 6 Mapoly0021s0077 [GO:0005685] U1 snRNP; [GO:0006376] mRNA splice site selection; [PF03194] LUC7 N_terminus; [PTHR12375] RNA-BINDING PROTEIN LUC7-RELATED; [KOG0796] Spliceosome subunit; [GO:0003729] mRNA binding 14.28 0.7564 7 Mapoly0066s0087 [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF09382] RQC domain; [KOG0353] ATP-dependent DNA helicase; [3.6.4.12] DNA helicase.; [K10899] ATP-dependent DNA helicase Q1 [EC:3.6.4.12]; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [GO:0005622] intracellular; [GO:0003676] nucleic acid binding; [GO:0043140] ATP-dependent 3'-5' DNA helicase activity; [PF00570] HRDC domain 18.44 0.7190 8 Mapoly0041s0053 [K13099] CD2 antigen cytoplasmic tail-binding protein 2; [PTHR13138:SF3] SUBFAMILY NOT NAMED; [PTHR13138] PROTEIN LIN1; [KOG2950] Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain 20.78 0.6721 9 Mapoly0005s0111 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 21.17 0.7274 10 Mapoly0019s0182 [KOG2473] RNA polymerase III transcription factor (TF)IIIC subunit; [PTHR13230] GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5; [PF09734] RNA polymerase III transcription factor (TF)IIIC subunit 22.80 0.7211 11 Mapoly0042s0020 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR11224:SF10] MAKORIN RELATED; [PTHR11224] MAKORIN-RELATED; [GO:0046872] metal ion binding 23.49 0.6229 12 Mapoly0093s0070 - 24.90 0.5097 13 Mapoly0001s0415 [PF05641] Agenet domain 25.30 0.6827 14 Mapoly0012s0200 [GO:0005685] U1 snRNP; [GO:0006376] mRNA splice site selection; [PF03194] LUC7 N_terminus; [PTHR12375] RNA-BINDING PROTEIN LUC7-RELATED; [KOG0796] Spliceosome subunit; [GO:0003729] mRNA binding 27.00 0.7197 15 Mapoly0148s0032 [PF01480] PWI domain; [PTHR18806:SF4] SUBFAMILY NOT NAMED; [GO:0006397] mRNA processing; [PTHR18806] RBM25 PROTEIN; [GO:0003676] nucleic acid binding; [K12822] RNA-binding protein 25; [KOG2253] U1 snRNP complex, subunit SNU71 and related PWI-motif proteins; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27.93 0.7406 16 Mapoly0009s0161 [PTHR15606:SF4] SUBFAMILY NOT NAMED; [PF00226] DnaJ domain; [PTHR15606] DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED; [KOG1150] Predicted molecular chaperone (DnaJ superfamily); [K09528] DnaJ homolog subfamily C member 8 29.39 0.6408 17 Mapoly0014s0141 [PTHR10615:SF81] SUBFAMILY NOT NAMED; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR10615] HISTONE ACETYLTRANSFERASE 30.98 0.7087 18 Mapoly0069s0088 - 31.67 0.6925 19 Mapoly0035s0147 [PTHR12085] PHOSPHATASE SUBUNIT GENE G4-1; [PTHR12085:SF3] PHOSPHATASE SUBUNIT GENE G4-1; [KOG2562] Protein phosphatase 2 regulatory subunit; [K11583] protein phosphatase 2 (formerly 2A), regulatory subunit B''; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding 31.75 0.6720 20 Mapoly0012s0166 [PF09405] CASC3/Barentsz eIF4AIII binding; [PTHR22814:SF47] HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN; [PTHR22814] COPPER TRANSPORT PROTEIN ATOX1-RELATED 34.39 0.7131 21 Mapoly0459s0001 - 35.72 0.6436 22 Mapoly0063s0002 [PF01480] PWI domain; [K13171] serine/arginine repetitive matrix protein 1; [PTHR23148] SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN; [GO:0006397] mRNA processing; [KOG2146] Splicing coactivator SRm160/300, subunit SRm160 (contains PWI domain) 36.48 0.7139 23 Mapoly0084s0081 - 39.65 0.5800 24 Mapoly0002s0236 [PTHR10782:SF4] SUBFAMILY NOT NAMED; [PTHR10782] ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [GO:0019789] SUMO ligase activity; [PF02891] MIZ/SP-RING zinc finger 40.10 0.7131 25 Mapoly4108s0001 [PTHR23140] RNA PROCESSING PROTEIN LD23810P 45.23 0.6817 26 Mapoly0129s0044 - 45.46 0.6504 27 Mapoly0001s0195 [GO:0070985] TFIIK complex; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016538] cyclin-dependent protein serine/threonine kinase regulator activity; [GO:0019901] protein kinase binding; [PTHR10026:SF8] CYCLIN H; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [KOG2496] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit; [GO:0006351] transcription, DNA-dependent; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity 45.54 0.6656 28 Mapoly0116s0012 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [PF00071] Ras family; [KOG0078] GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins; [GO:0005525] GTP binding 47.96 0.5348 29 Mapoly0133s0014 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN 47.96 0.6421 30 Mapoly0045s0077 [PTHR11807:SF2] CELL CYCLE PROTEIN MESJ; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PTHR11807] ATPASES OF THE PP SUPERFAMILY-RELATED; [GO:0016879] ligase activity, forming carbon-nitrogen bonds; [PF01171] PP-loop family; [GO:0008033] tRNA processing 49.30 0.6690 31 Mapoly0010s0030 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [GO:0005515] protein binding; [PF00439] Bromodomain 49.66 0.6873 32 Mapoly0013s0166 [KOG1731] FAD-dependent sulfhydryl oxidase/quiescin and related proteins; [GO:0016972] thiol oxidase activity; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [PTHR22897:SF8] SUBFAMILY NOT NAMED; [PTHR22897] QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE; [PF04777] Erv1 / Alr family; [PF00085] Thioredoxin 51.97 0.6581 33 Mapoly0051s0020 [PTHR12785:SF6] SUBFAMILY NOT NAMED; [K12829] splicing factor 3B subunit 2; [GO:0005634] nucleus; [PF04046] PSP; [KOG2330] Splicing factor 3b, subunit 2; [PTHR12785] FAMILY NOT NAMED; [PF04037] Domain of unknown function (DUF382) 53.18 0.7098 34 Mapoly0072s0016 [GO:0005515] protein binding; [PTHR15398] BROMODOMAIN-CONTAINING PROTEIN 8; [PF00439] Bromodomain; [K11321] bromodomain-containing protein 8; [PTHR15398:SF0] SUBFAMILY NOT NAMED 53.39 0.6740 35 Mapoly0013s0097 - 54.99 0.6366 36 Mapoly0001s0516 [KOG2428] Uncharacterized conserved protein; [PF04004] Leo1-like protein; [PTHR23146] LEO1 PROTEIN; [PTHR23146:SF0] SUBFAMILY NOT NAMED 56.75 0.6650 37 Mapoly0186s0008 [GO:0003676] nucleic acid binding; [KOG0106] Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily); [PTHR10548] SPLICING FACTOR, ARGININE/SERINE-RICH; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58.75 0.6695 38 Mapoly0011s0104 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0546] HSP90 co-chaperone CPR7/Cyclophilin; [GO:0006457] protein folding 59.60 0.6675 39 Mapoly0045s0119 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR13161] SPLICING FACTOR (SUPPRESSOR OF WHITE APRICOT); [PF01805] Surp module; [PF09750] Alternative splicing regulator; [KOG1847] mRNA splicing factor 60.40 0.6741 40 Mapoly0005s0094 [KOG2016] NEDD8-activating complex, APP-BP1/UBA5 component; [K04532] amyloid beta precursor protein binding protein 1; [PF00899] ThiF family; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity 60.60 0.5957 41 Mapoly0103s0005 [PTHR32059] FAMILY NOT NAMED; [GO:0005515] protein binding; [PTHR32059:SF0] SUBFAMILY NOT NAMED; [PF02985] HEAT repeat; [KOG0211] Protein phosphatase 2A regulatory subunit A and related proteins 63.45 0.6672 42 Mapoly0057s0059 - 65.45 0.5422 43 Mapoly0080s0093 [GO:0003677] DNA binding; [PF00046] Homeobox domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR12628] POLYCOMB-LIKE TRANSCRIPTION FACTOR 66.11 0.6766 44 Mapoly0009s0058 [K01265] methionyl aminopeptidase [EC:3.4.11.18]; [PTHR10804:SF9] METHIONINE AMINOPEPTIDASE 2; [GO:0008235] metalloexopeptidase activity; [3.4.11.18] Methionyl aminopeptidase.; [KOG2775] Metallopeptidase; [GO:0004177] aminopeptidase activity; [PF00557] Metallopeptidase family M24; [GO:0006508] proteolysis; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) 66.95 0.5291 45 Mapoly0001s0473 - 66.96 0.6837 46 Mapoly0001s0070 [PTHR10994] RETICULON; [PF02453] Reticulon; [KOG1792] Reticulon 68.12 0.6040 47 Mapoly0065s0024 - 69.57 0.6361 48 Mapoly0038s0101 [K12837] splicing factor U2AF 65 kDa subunit; [PTHR23139] RNA-BINDING PROTEIN; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG0120] Splicing factor U2AF, large subunit (RRM superfamily); [GO:0003676] nucleic acid binding; [PTHR23139:SF9] SPLICING FACTOR U2AF LARGE SUBUNIT; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 69.95 0.6819 49 Mapoly0079s0042 [GO:0003723] RNA binding; [KOG2202] U2 snRNP splicing factor, small subunit, and related proteins; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12620] U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT; [GO:0005634] nucleus; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [GO:0046872] metal ion binding 74.07 0.6726 50 Mapoly0113s0031 [GO:0016020] membrane; [K10085] ER degradation enhancer, mannosidase alpha-like 2; [PTHR11742] MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED; [GO:0005509] calcium ion binding; [GO:0004571] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; [PF01532] Glycosyl hydrolase family 47; [KOG2429] Glycosyl hydrolase, family 47 74.48 0.5824