Guide Gene

Gene ID
Mapoly0218s0012
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR15744:SF0] SUBFAMILY NOT NAMED; [PTHR15744] BLOM7

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0218s0012 [PTHR15744:SF0] SUBFAMILY NOT NAMED; [PTHR15744] BLOM7 0.00 1.0000
1 Mapoly0104s0042 [PTHR22846:SF2] TRANSDUCIN BETA-LIKE 1; [GO:0005515] protein binding; [PTHR22846] WD40 REPEAT PROTEIN; [KOG0273] Beta-transducin family (WD-40 repeat) protein; [PF08513] LisH; [PF00400] WD domain, G-beta repeat1.000.8847
2 Mapoly0188s0016 -3.160.8344
3 Mapoly0027s0186 [GO:0005524] ATP binding; [K10866] DNA repair protein RAD50 [EC:3.6.-.-]; [PF13476] AAA domain; [GO:0008270] zinc ion binding; [PF04423] Rad50 zinc hook motif; [3.6.-.-] Acting on acid anhydrides.; [GO:0006281] DNA repair; [KOG0962] DNA repair protein RAD50, ABC-type ATPase/SMC superfamily; [PTHR18867:SF12] SUBFAMILY NOT NAMED; [PTHR18867] RAD50; [GO:0004518] nuclease activity; [GO:0030870] Mre11 complex; [PF13558] Putative exonuclease SbcCD, C subunit3.740.8672
4 Mapoly0143s0017 -5.290.8265
5 Mapoly0022s0041 [GO:0003723] RNA binding; [KOG2190] PolyC-binding proteins alphaCP-1 and related KH domain proteins; [PTHR10288] KH DOMAIN CONTAINING RNA BINDING PROTEIN; [PF00013] KH domain6.000.8510
6 Mapoly0028s0110 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [PTHR23069:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PF00439] Bromodomain; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0732] AAA+-type ATPase containing the bromodomain6.930.8648
7 Mapoly0070s0095 [PTHR23215] ZINC FINGER PROTEIN 207; [KOG2893] Zn finger protein7.750.8304
8 Mapoly0143s0016 -8.000.7841
9 Mapoly0057s0080 [PTHR15140:SF6] SUBFAMILY NOT NAMED; [KOG3207] Beta-tubulin folding cofactor E; [PF01302] CAP-Gly domain; [PTHR15140] TUBULIN-SPECIFIC CHAPERONE E10.820.8173
10 Mapoly0032s0133 [PF12432] Protein of unknown function (DUF3677); [PTHR21224:SF1] SUBFAMILY NOT NAMED; [K13138] integrator complex subunit 1; [PTHR21224] UNCHARACTERIZED12.370.8195
11 Mapoly0181s0006 [PF13414] TPR repeat; [PTHR14699:SF0] SUBFAMILY NOT NAMED; [PTHR14699] STI2 PROTEIN-RELATED13.670.8119
12 Mapoly0006s0255 [GO:0003723] RNA binding; [PTHR10288] KH DOMAIN CONTAINING RNA BINDING PROTEIN; [PF00013] KH domain; [KOG2192] PolyC-binding hnRNP-K protein HRB57A/hnRNP, contains KH domain; [K13210] far upstream element-binding protein14.140.8245
13 Mapoly0048s0075 [K01277] dipeptidyl-peptidase III [EC:3.4.14.4]; [PTHR23422] DIPEPTIDYL PEPTIDASE III-RELATED; [3.4.14.4] Dipeptidyl-peptidase III.; [PF03571] Peptidase family M49; [KOG3675] Dipeptidyl peptidase III14.660.6265
14 Mapoly0144s0027 [PTHR12872] ALPHA-N-ACETYLGLUCOSAMINIDASE; [KOG2233] Alpha-N-acetylglucosaminidase; [PF05089] Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; [K01205] alpha-N-acetylglucosaminidase [EC:3.2.1.50]; [3.2.1.50] Alpha-N-acetylglucosaminidase.; [PF12972] Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain; [PF12971] Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain14.830.8076
15 Mapoly0135s0035 [GO:0003676] nucleic acid binding; [PF02037] SAP domain16.580.8187
16 Mapoly0026s0020 [KOG2253] U1 snRNP complex, subunit SNU71 and related PWI-motif proteins17.030.8194
17 Mapoly0174s0020 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain; [KOG1801] tRNA-splicing endonuclease positive effector (SEN1)18.970.8139
18 Mapoly0002s0028 [PF00630] Filamin/ABP280 repeat; [GO:0003676] nucleic acid binding; [KOG0146] RNA-binding protein ETR-3 (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)20.200.8186
19 Mapoly0104s0019 [KOG2242] Scaffold/matrix specific factor hnRNP-U/SAF-A, contains SPRY domain; [PTHR12381:SF13] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PF13671] AAA domain; [PF00622] SPRY domain; [PTHR12381] RIBONUCLEOPROTEIN20.450.8097
20 Mapoly0158s0019 [PTHR24012] FAMILY NOT NAMED; [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)22.980.8026
21 Mapoly0043s0082 [PF07899] Frigida-like protein; [PTHR31791] FAMILY NOT NAMED23.370.8037
22 Mapoly0005s0067 [PTHR15242:SF0] SUBFAMILY NOT NAMED; [PTHR15242] SPLICING FACTOR, ARGININE/SERINE-RICH 2,RNAP C-TERM INTERACTING PROTEIN; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0046872] metal ion binding25.100.8163
23 Mapoly0002s0236 [PTHR10782:SF4] SUBFAMILY NOT NAMED; [PTHR10782] ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [GO:0019789] SUMO ligase activity; [PF02891] MIZ/SP-RING zinc finger25.380.8025
24 Mapoly0014s0115 [PTHR15137] TRANSCRIPTION INITIATION FACTOR TFIID; [PF01433] Peptidase family M1; [GO:0008237] metallopeptidase activity; [GO:0008270] zinc ion binding; [K03128] transcription initiation factor TFIID subunit 2; [KOG1932] TATA binding protein associated factor25.460.7957
25 Mapoly0005s0256 [PF12220] U1 small nuclear ribonucleoprotein of 70kDa MW N terminal; [KOG0113] U1 small nuclear ribonucleoprotein (RRM superfamily); [PTHR13952:SF5] PREDICTED: HYPOTHETICAL PROTEIN, PARTIAL; [PTHR13952] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD; [K11093] U1 small nuclear ribonucleoprotein 70kDa; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)25.920.7916
26 Mapoly0006s0222 [GO:0005524] ATP binding; [GO:0032300] mismatch repair complex; [KOG1977] DNA mismatch repair protein - MLH3 family; [PTHR10073:SF7] DNA MISMATCH REPAIR PROTEIN MLH3; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0007131] reciprocal meiotic recombination; [PTHR10073] DNA MISMATCH REPAIR PROTEIN (MLH, PMS, MUTL); [GO:0006298] mismatch repair; [PF08676] MutL C terminal dimerisation domain; [GO:0030983] mismatched DNA binding; [PF01119] DNA mismatch repair protein, C-terminal domain; [K08739] DNA mismatch repair protein MLH326.120.7848
27 Mapoly0021s0138 [KOG1548] Transcription elongation factor TAT-SF1; [GO:0005515] protein binding; [K13093] HIV Tat-specific factor 1; [PF02213] GYF domain; [PTHR15608] SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2; [PF14237] Domain of unknown function (DUF4339); [GO:0003676] nucleic acid binding; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)26.930.7871
28 Mapoly0037s0071 [GO:0006355] regulation of transcription, DNA-dependent; [KOG0835] Cyclin L; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [PTHR10026:SF13] CYCLIN-L1-RELATED; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity27.390.7861
29 Mapoly0001s0473 -27.420.8125
30 Mapoly0030s0061 [GO:0005663] DNA replication factor C complex; [GO:0005524] ATP binding; [GO:0006260] DNA replication; [GO:0003689] DNA clamp loader activity; [PF00533] BRCA1 C Terminus (BRCT) domain; [K10754] replication factor C subunit 1; [PTHR23389] CHROMOSOME TRANSMISSION FIDELITY FACTOR 18; [PF00004] ATPase family associated with various cellular activities (AAA); [PF08519] Replication factor RFC1 C terminal domain; [KOG1968] Replication factor C, subunit RFC1 (large subunit)27.840.7962
31 Mapoly0091s0013 [GO:0003723] RNA binding; [KOG2202] U2 snRNP splicing factor, small subunit, and related proteins; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12620] U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT; [GO:0005634] nucleus; [K12836] splicing factor U2AF 35 kDa subunit; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [GO:0046872] metal ion binding28.770.8113
32 Mapoly0125s0028 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0205] Plasma membrane H+-transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase28.980.7981
33 Mapoly0006s0043 [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [PF05000] RNA polymerase Rpb1, domain 4; [PF11523] Protein of unknown function (DUF3223); [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04983] RNA polymerase Rpb1, domain 3; [PTHR19376:SF33] DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA''31.750.7257
34 Mapoly0005s0201 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0005515] protein binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR12348] TSC22; [PF00498] FHA domain33.410.7826
35 Mapoly0045s0119 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR13161] SPLICING FACTOR (SUPPRESSOR OF WHITE APRICOT); [PF01805] Surp module; [PF09750] Alternative splicing regulator; [KOG1847] mRNA splicing factor33.990.7838
36 Mapoly0005s0267 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others34.210.7958
37 Mapoly0029s0099 [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PTHR23336:SF7] SUBFAMILY NOT NAMED; [KOG1845] MORC family ATPases; [PTHR23336] ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.35.330.7676
38 Mapoly0063s0041 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR23340] ARGININE/SERINE RICH SPLICING FACTOR SF4/14; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PF01805] Surp module35.410.7728
39 Mapoly0100s0038 [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0098] GTPase Rab2, small G protein superfamily; [PF15305] Intraflagellar transport protein 43; [PF00071] Ras family; [GO:0005525] GTP binding; [GO:0030991] intraflagellar transport particle A36.990.7458
40 Mapoly0004s0112 -37.350.7598
41 Mapoly0021s0043 -37.790.7837
42 Mapoly0033s0088 [GO:0005515] protein binding; [PTHR19918:SF8] gb def: Meiosis-specific APC/C activator protein AMA1 (Activator of meiotic APC/C protei; [KOG0305] Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits; [K03363] cell division cycle 20, cofactor of APC complex; [PTHR19918] CELL DIVISION CYCLE 20 (CDC20) (FIZZY)-RELATED; [PF00400] WD domain, G-beta repeat38.950.7820
43 Mapoly0041s0148 [PF01426] BAH domain; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR39.380.7582
44 Mapoly0055s0120 -40.560.7827
45 Mapoly0043s0131 [PF06465] Domain of Unknown Function (DUF1087)41.420.7206
46 Mapoly0019s0079 -42.470.6524
47 Mapoly0059s0005 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [KOG0519] Sensory transduction histidine kinase; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF05231] MASE1; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity42.530.7282
48 Mapoly0030s0034 -44.620.6426
49 Mapoly0011s0132 -44.900.7619
50 Mapoly0007s0002 [PTHR22774] UNCHARACTERIZED; [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter; [PTHR22774:SF11] UHRF1-BINDING PROTEIN 1 UBIQUITIN-LIKE CONTAINING PHD AND RING FINGER DOMAINS 146.370.7123
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