Guide Gene

Gene ID
Mapoly0046s0024
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0008270] zinc ion binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [PF01485] IBR domain; [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold; [GO:0046872] metal ion binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0046s0024 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0008270] zinc ion binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [PF01485] IBR domain; [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold; [GO:0046872] metal ion binding 0.00 1.0000
1 Mapoly0031s0140 [GO:0016307] phosphatidylinositol phosphate kinase activity; [KOG0230] Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins; [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PF01504] Phosphatidylinositol-4-phosphate 5-Kinase; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [K00921] 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]; [2.7.1.150] 1-phosphatidylinositol-3-phosphate 5-kinase.; [GO:0046872] metal ion binding; [GO:0046488] phosphatidylinositol metabolic process; [PF01363] FYVE zinc finger8.000.6648
2 Mapoly0112s0020 -14.390.5696
3 Mapoly0099s0021 [PF10351] Golgi-body localisation protein domain; [KOG1910] Uncharacterized conserved protein; [PF10347] RNA pol II promoter Fmp27 protein domain; [PTHR15678:SF6] SUBFAMILY NOT NAMED; [PTHR15678] ANTIGEN MLAA-22-RELATED15.780.6342
4 Mapoly0053s0062 [PF12739] ER-Golgi trafficking TRAPP I complex 85 kDa subunit; [PTHR12975] TRANSPORT PROTEIN (TRAPP); [PTHR12975:SF6] SUBFAMILY NOT NAMED; [KOG1938] Protein with predicted involvement in meiosis (GSG1)17.660.6521
5 Mapoly0003s0181 [PF01391] Collagen triple helix repeat (20 copies)20.740.5675
6 Mapoly0087s0079 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger)24.660.6037
7 Mapoly0016s0048 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [KOG0920] ATP-dependent RNA helicase A; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold; [K14442] ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]28.910.5644
8 Mapoly0001s0125 -29.530.5716
9 Mapoly0041s0033 [KOG4308] LRR-containing protein; [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED30.510.5240
10 Mapoly0003s0222 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [K11592] endoribonuclease Dicer [EC:3.1.26.-]; [PF02170] PAZ domain; [3.1.26.-] Endoribonucleases producing 5'-phosphomonoesters.; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [GO:0005515] protein binding; [PF03368] Dicer dimerisation domain; [PF00636] Ribonuclease III domain; [PF00270] DEAD/DEAH box helicase; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1; [GO:0003676] nucleic acid binding; [KOG0701] dsRNA-specific nuclease Dicer and related ribonucleases34.390.5818
11 Mapoly0047s0113 -36.740.5890
12 Mapoly0147s0031 [PTHR11062] EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED; [KOG1021] Acetylglucosaminyltransferase EXT1/exostosin 1; [PF03016] Exostosin family37.150.5208
13 Mapoly0043s0138 [PTHR24078:SF25] DNAJ HOMOLOG SUBFAMILY C MEMBER 13; [PF00226] DnaJ domain; [PF14237] Domain of unknown function (DUF4339); [KOG1789] Endocytosis protein RME-8, contains DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER42.950.5890
14 Mapoly0011s0190 [GO:0004134] 4-alpha-glucanotransferase activity; [PTHR32518:SF0] SUBFAMILY NOT NAMED; [GO:0005975] carbohydrate metabolic process; [PF00686] Starch binding domain; [2.4.1.25] 4-alpha-glucanotransferase.; [PF02446] 4-alpha-glucanotransferase; [PTHR32518] FAMILY NOT NAMED; [K00705] 4-alpha-glucanotransferase [EC:2.4.1.25]48.510.5445
15 Mapoly0067s0030 [KOG0254] Predicted transporter (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [PTHR24063:SF148] PUTATIVE UNCHARACTERIZED PROTEIN; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED55.990.4880
16 Mapoly0012s0139 [GO:0016020] membrane; [GO:0006486] protein glycosylation; [K14413] beta-1,3-galactosyltransferase [EC:2.4.1.-]; [GO:0008378] galactosyltransferase activity; [PF01762] Galactosyltransferase; [PTHR11214] BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE; [KOG2287] Galactosyltransferases; [GO:0030246] carbohydrate binding; [PF00337] Galactoside-binding lectin; [2.4.1.-] Hexosyltransferases.58.460.4941
17 Mapoly0063s0029 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF05231] MASE1; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity62.350.4964
18 Mapoly0001s0480 [PF00249] Myb-like DNA-binding domain; [PTHR13992] NUCLEAR RECEPTOR CO-REPRESSOR RELATED (NCOR); [GO:0003682] chromatin binding; [PTHR13992:SF7] GB DEF: ZGC:56355 PROTEIN; [KOG3227] Calcium-responsive transcription coactivator65.350.5429
19 Mapoly0084s0085 [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN; [PTHR21717:SF9] TELOMERIC REPEAT BINDING PROTEIN 167.370.5359
20 Mapoly0143s0007 [PF08314] Secretory pathway protein Sec39; [PTHR15922:SF2] SUBFAMILY NOT NAMED; [PTHR15922] FAMILY NOT NAMED67.790.5598
21 Mapoly0113s0018 -68.960.5412
22 Mapoly0061s0115 [PTHR23079] RNA-DEPENDENT RNA POLYMERASE; [GO:0003968] RNA-directed RNA polymerase activity; [PTHR23079:SF1] RNA-DEPENDENT RNA POLYMERASE; [KOG0988] RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference; [PF05183] RNA dependent RNA polymerase69.910.5151
23 Mapoly1179s0002 -77.320.4606
24 Mapoly0008s0135 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE; [KOG0582] Ste20-like serine/threonine protein kinase78.740.5125
25 Mapoly0082s0054 [PF10358] N-terminal C2 in EEIG1 and EHBP1 proteins; [PTHR31593] FAMILY NOT NAMED; [PTHR31593:SF0] SUBFAMILY NOT NAMED82.610.5207
26 Mapoly0051s0033 [PTHR32060] FAMILY NOT NAMED; [PF03572] Peptidase family S41; [PF00595] PDZ domain (Also known as DHR or GLGF); [GO:0008236] serine-type peptidase activity; [GO:0005515] protein binding; [GO:0006508] proteolysis85.380.5130
27 Mapoly0014s0196 [PTHR12272] FAMILY NOT NAMED; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [KOG3741] Poly(A) ribonuclease subunit; [K12572] PAB-dependent poly(A)-specific ribonuclease subunit 3; [GO:0046872] metal ion binding89.350.5373
28 Mapoly0006s0043 [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [PF05000] RNA polymerase Rpb1, domain 4; [PF11523] Protein of unknown function (DUF3223); [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04983] RNA polymerase Rpb1, domain 3; [PTHR19376:SF33] DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA''89.860.5157
29 Mapoly0117s0012 [3.1.3.67] Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase.; [PF00782] Dual specificity phosphatase, catalytic domain; [K01110] phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase [EC:3.1.3.67]; [GO:0006470] protein dephosphorylation; [PF10409] C2 domain of PTEN tumour-suppressor protein; [PTHR12305] PHOSPHATASE WITH HOMOLOGY TO TENSIN; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity; [KOG1720] Protein tyrosine phosphatase CDC1490.430.4622
30 Mapoly0165s0011 [PTHR10231:SF25] SUBFAMILY NOT NAMED; [GO:0000139] Golgi membrane; [GO:0016021] integral to membrane; [PTHR10231] NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER; [GO:0005351] sugar:hydrogen symporter activity; [GO:0008643] carbohydrate transport; [KOG2234] Predicted UDP-galactose transporter; [PF04142] Nucleotide-sugar transporter92.610.4843
31 Mapoly0171s0025 [GO:0042393] histone binding; [GO:0003677] DNA binding; [GO:0005524] ATP binding; [KOG0386] Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily); [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain; [PF14619] Snf2-ATP coupling, chromatin remodelling complex93.770.5150
32 Mapoly0009s0011 [PF06650] Protein of unknown function (DUF1162); [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter97.670.5269
33 Mapoly0177s0011 [GO:0006289] nucleotide-excision repair; [PF00867] XPG I-region; [PF00752] XPG N-terminal domain; [GO:0003697] single-stranded DNA binding; [K10846] DNA excision repair protein ERCC-5; [GO:0005634] nucleus; [PTHR11081:SF1] DNA-REPAIR PROTEIN XP-G; [GO:0006281] DNA repair; [GO:0004518] nuclease activity; [PTHR11081] XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY; [GO:0004519] endonuclease activity100.050.5197
34 Mapoly0030s0147 [GO:0005524] ATP binding; [PF01928] CYTH domain; [KOG3308] Uncharacterized protein of the uridine kinase family; [PF00485] Phosphoribulokinase / Uridine kinase family; [GO:0008152] metabolic process; [GO:0016301] kinase activity; [PTHR10285] URIDINE KINASE102.430.4493
35 Mapoly0007s0002 [PTHR22774] UNCHARACTERIZED; [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter; [PTHR22774:SF11] UHRF1-BINDING PROTEIN 1 UBIQUITIN-LIKE CONTAINING PHD AND RING FINGER DOMAINS 1102.600.5148
36 Mapoly0172s0014 [PF00569] Zinc finger, ZZ type; [GO:0008270] zinc ion binding103.350.4556
37 Mapoly0009s0242 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR22835] ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process108.540.4436
38 Mapoly0177s0009 [KOG2641] Predicted seven transmembrane receptor - rhodopsin family; [PTHR23423] ORGANIC SOLUTE TRANSPORTER-RELATED; [PF03619] Organic solute transporter Ostalpha108.780.4859
39 Mapoly0107s0053 [GO:0008601] protein phosphatase type 2A regulator activity; [PTHR10257] SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B; [GO:0000159] protein phosphatase type 2A complex; [KOG2085] Serine/threonine protein phosphatase 2A, regulatory subunit; [GO:0007165] signal transduction; [K11584] protein phosphatase 2 (formerly 2A), regulatory subunit B'; [PF01603] Protein phosphatase 2A regulatory B subunit (B56 family)109.680.5187
40 Mapoly0130s0022 [GO:0008565] protein transporter activity; [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [GO:0015031] protein transport; [PTHR22780:SF5] ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA SUBUNIT (GAMMA-ADAPTIN); [PF02883] Adaptin C-terminal domain; [KOG1062] Vesicle coat complex AP-1, gamma subunit; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [K12391] AP-1 complex subunit gamma-1; [GO:0005794] Golgi apparatus110.960.5057
41 Mapoly1710s0001 -112.410.4460
42 Mapoly0134s0010 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF12726] SEN1 N terminal; [PF13086] AAA domain; [KOG2812] Uncharacterized conserved protein; [PF13087] AAA domain115.520.5171
43 Mapoly0072s0037 -118.360.4438
44 Mapoly0081s0068 -123.020.5054
45 Mapoly0073s0007 [PTHR32161] FAMILY NOT NAMED; [PF07676] WD40-like Beta Propeller Repeat; [PTHR32161:SF1] SUBFAMILY NOT NAMED123.330.4635
46 Mapoly0101s0056 -123.850.3967
47 Mapoly0077s0046 -124.320.3892
48 Mapoly0073s0090 [GO:0043531] ADP binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING; [PF00931] NB-ARC domain; [PF13646] HEAT repeats125.830.4152
49 Mapoly0123s0014 [GO:0008270] zinc ion binding; [PF02207] Putative zinc finger in N-recognin (UBR box); [KOG1139] Predicted ubiquitin-protein ligase of the N-recognin family; [PTHR21497] UBIQUITIN LIGASE E3 ALPHA-RELATED; [GO:0004842] ubiquitin-protein ligase activity126.610.5049
50 Mapoly0054s0061 [KOG3228] Uncharacterized conserved protein126.700.4968
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