Guide Gene

Gene ID
Mapoly0087s0079
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0087s0079 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger) 0.00 1.0000
1 Mapoly0004s0170 [PF04357] Family of unknown function (DUF490)1.730.8187
2 Mapoly0055s0021 -3.740.7631
3 Mapoly0090s0030 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation4.240.8461
4 Mapoly0099s0021 [PF10351] Golgi-body localisation protein domain; [KOG1910] Uncharacterized conserved protein; [PF10347] RNA pol II promoter Fmp27 protein domain; [PTHR15678:SF6] SUBFAMILY NOT NAMED; [PTHR15678] ANTIGEN MLAA-22-RELATED4.900.7771
5 Mapoly0042s0013 -5.200.7379
6 Mapoly0012s0190 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0003774] motor activity; [PTHR13140] MYOSIN; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PF01843] DIL domain; [GO:0005515] protein binding; [KOG0160] Myosin class V heavy chain; [PF00612] IQ calmodulin-binding motif; [PF02736] Myosin N-terminal SH3-like domain; [PF00013] KH domain; [GO:0046872] metal ion binding; [PF00063] Myosin head (motor domain); [GO:0016459] myosin complex6.710.7991
7 Mapoly0082s0083 [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [KOG1788] Uncharacterized conserved protein; [PF02138] Beige/BEACH domain; [PF13385] Concanavalin A-like lectin/glucanases superfamily; [PF14844] PH domain associated with Beige/BEACH; [PF00400] WD domain, G-beta repeat8.600.8203
8 Mapoly0031s0140 [GO:0016307] phosphatidylinositol phosphate kinase activity; [KOG0230] Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins; [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PF01504] Phosphatidylinositol-4-phosphate 5-Kinase; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [K00921] 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]; [2.7.1.150] 1-phosphatidylinositol-3-phosphate 5-kinase.; [GO:0046872] metal ion binding; [GO:0046488] phosphatidylinositol metabolic process; [PF01363] FYVE zinc finger10.490.7754
9 Mapoly0055s0072 [PTHR16254] POTASSIUM/PROTON ANTIPORTER-RELATED; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [KOG1650] Predicted K+/H+-antiporter; [GO:0055085] transmembrane transport; [GO:0006813] potassium ion transport; [PF02254] TrkA-N domain; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family12.330.7060
10 Mapoly0015s0020 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation12.490.7386
11 Mapoly0101s0045 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [GO:0005515] protein binding; [K08873] PI-3-kinase-related kinase SMG-1; [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED14.560.8109
12 Mapoly0066s0021 [KOG1884] Uncharacterized conserved protein; [PF14649] Spatacsin C-terminus; [PTHR13650] UNCHARACTERIZED14.700.7858
13 Mapoly0105s0052 [PTHR32387] FAMILY NOT NAMED; [PF13020] Domain of unknown function (DUF3883); [PTHR32387:SF0] SUBFAMILY NOT NAMED15.000.7438
14 Mapoly0012s0024 -18.380.7702
15 Mapoly0079s0057 [PF03828] Cid1 family poly A polymerase; [PTHR12271] POLY(A) POLYMERASE CID (PAP)-RELATED18.490.7556
16 Mapoly0030s0155 [GO:0005086] ARF guanyl-nucleotide exchange factor activity; [PF09324] Domain of unknown function (DUF1981); [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [KOG0929] Guanine nucleotide exchange factor; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [PF01369] Sec7 domain; [GO:0032012] regulation of ARF protein signal transduction19.620.7739
17 Mapoly0043s0138 [PTHR24078:SF25] DNAJ HOMOLOG SUBFAMILY C MEMBER 13; [PF00226] DnaJ domain; [PF14237] Domain of unknown function (DUF4339); [KOG1789] Endocytosis protein RME-8, contains DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER19.900.7761
18 Mapoly0003s0222 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [K11592] endoribonuclease Dicer [EC:3.1.26.-]; [PF02170] PAZ domain; [3.1.26.-] Endoribonucleases producing 5'-phosphomonoesters.; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [GO:0005515] protein binding; [PF03368] Dicer dimerisation domain; [PF00636] Ribonuclease III domain; [PF00270] DEAD/DEAH box helicase; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1; [GO:0003676] nucleic acid binding; [KOG0701] dsRNA-specific nuclease Dicer and related ribonucleases20.400.7229
19 Mapoly0023s0169 -20.490.6749
20 Mapoly0056s0137 [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [PTHR13743:SF16] SUBFAMILY NOT NAMED; [KOG1787] Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins; [PF02138] Beige/BEACH domain; [PF14844] PH domain associated with Beige/BEACH; [PF00400] WD domain, G-beta repeat22.290.7773
21 Mapoly0059s0053 [PF01988] VIT family22.360.6881
22 Mapoly0060s0028 [PTHR24412] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding22.520.5921
23 Mapoly0004s0108 [GO:0007067] mitosis; [K11578] centromere/kinetochore protein ZW10; [GO:0005634] nucleus; [PTHR12205:SF0] SUBFAMILY NOT NAMED; [GO:0000775] chromosome, centromeric region; [PTHR12205] CENTROMERE/KINETOCHORE PROTEIN ZW10; [PF06248] Centromere/kinetochore Zw1024.370.6668
24 Mapoly0046s0024 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0008270] zinc ion binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [PF01485] IBR domain; [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold; [GO:0046872] metal ion binding24.660.6037
25 Mapoly0007s0005 [PF06957] Coatomer (COPI) alpha subunit C-terminus; [GO:0016192] vesicle-mediated transport; [K05236] coatomer protein complex, subunit alpha (xenin); [KOG0292] Vesicle coat complex COPI, alpha subunit; [GO:0005515] protein binding; [PTHR19876:SF1] COATOMER ALPHA SUBUNIT; [PTHR19876] COATOMER; [GO:0030126] COPI vesicle coat; [PF04053] Coatomer WD associated region; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [GO:0005198] structural molecule activity; [PF00400] WD domain, G-beta repeat25.690.7126
26 Mapoly0060s0082 [PTHR23213] FORMIN-RELATED; [KOG4462] WASP-interacting protein VRP1/WIP, contains WH2 domain25.690.7726
27 Mapoly0070s0077 [PTHR21551] TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1; [PTHR21551:SF1] gb def: ENSANGP00000010369 (Fragment); [K12617] DNA topoisomerase 2-associated protein PAT125.750.6875
28 Mapoly0124s0011 [KOG1825] Fry-like conserved proteins; [PF14225] Cell morphogenesis C-terminal; [PTHR12295] UNCHARACTERIZED; [PF14222] Cell morphogenesis N-terminal; [PF14228] Cell morphogenesis central region25.920.7472
29 Mapoly0175s0011 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR15600] FAMILY NOT NAMED; [PF13920] Zinc finger, C3HC4 type (RING finger)27.570.7529
30 Mapoly0076s0036 [PF06101] Plant protein of unknown function (DUF946); [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter; [PTHR16166:SF61] PUTATIVE UNCHARACTERIZED PROTEIN28.570.7558
31 Mapoly0023s0171 [GO:0016021] integral to membrane; [GO:0008381] mechanically-gated ion channel activity; [PTHR13167] UNCHARACTERIZED; [PF12166] Protein of unknown function (DUF3595); [PTHR13167:SF25] PREDICTED: SIMILAR TO MIB29.700.7521
32 Mapoly0063s0029 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF05231] MASE1; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity29.700.6186
33 Mapoly0038s0024 [PTHR19878] AUTOPHAGY PROTEIN 16-LIKE30.510.7545
34 Mapoly0014s0213 [KOG1991] Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily); [PF08506] Cse1; [PF03810] Importin-beta N-terminal domain; [GO:0005515] protein binding; [PF03378] CAS/CSE protein, C-terminus; [PTHR10997:SF18] IMPORTIN 7, 8 (IMP7, 8) (RAN-BINDING PROTEIN 7, 8); [GO:0006886] intracellular protein transport; [PTHR10997] IMPORTIN-7, 8, 11; [GO:0008536] Ran GTPase binding31.020.7089
35 Mapoly0076s0015 [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase31.080.7004
36 Mapoly0049s0060 [KOG1811] Predicted Zn2+-binding protein, contains FYVE domain33.230.7579
37 Mapoly0101s0033 [PTHR21663] HYPOTHETICAL HEAT DOMAIN-CONTAINING; [KOG1822] Uncharacterized conserved protein; [PTHR21663:SF0] SUBFAMILY NOT NAMED34.420.7603
38 Mapoly0123s0038 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [K11844] ubiquitin carboxyl-terminal hydrolase 16/45 [EC:3.1.2.15]; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0008270] zinc ion binding; [KOG1873] Ubiquitin-specific protease; [PTHR24006] FAMILY NOT NAMED; [PF02148] Zn-finger in ubiquitin-hydrolases and other protein37.460.7494
39 Mapoly0100s0059 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [GO:0004672] protein kinase activity; [6.3.2.19] Ubiquitin--protein ligase.; [K10143] E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19]; [GO:0006468] protein phosphorylation; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat37.990.6285
40 Mapoly0051s0033 [PTHR32060] FAMILY NOT NAMED; [PF03572] Peptidase family S41; [PF00595] PDZ domain (Also known as DHR or GLGF); [GO:0008236] serine-type peptidase activity; [GO:0005515] protein binding; [GO:0006508] proteolysis38.670.6669
41 Mapoly0121s0043 [PF11145] Protein of unknown function (DUF2921)39.240.6572
42 Mapoly0170s0008 [K06111] exocyst complex component 4; [GO:0006904] vesicle docking involved in exocytosis; [PF04048] Sec8 exocyst complex component specific domain; [GO:0000145] exocyst; [PTHR14146] EXOCYST COMPLEX COMPONENT 4; [GO:0015031] protein transport40.990.7044
43 Mapoly0005s0083 [PF01602] Adaptin N terminal region; [GO:0016192] vesicle-mediated transport; [GO:0030126] COPI vesicle coat; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [KOG1078] Vesicle coat complex COPI, gamma subunit; [PF08752] Coatomer gamma subunit appendage platform subdomain; [GO:0005198] structural molecule activity; [PTHR10261] COATOMER SUBUNIT GAMMA41.180.6836
44 Mapoly0001s0542 [KOG0266] WD40 repeat-containing protein; [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [PF02138] Beige/BEACH domain; [PF13385] Concanavalin A-like lectin/glucanases superfamily; [PF14844] PH domain associated with Beige/BEACH; [PF00400] WD domain, G-beta repeat41.420.7495
45 Mapoly0072s0011 [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [KOG1077] Vesicle coat complex AP-2, alpha subunit; [PF02883] Adaptin C-terminal domain; [PF02296] Alpha adaptin AP2, C-terminal domain; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [PTHR22780:SF4] ADAPTER-RELATED PROTEIN COMPLEX 2 ALPHA 1 SUBUNIT (ALPHA-ADAPTIN A); [K11824] AP-2 complex subunit alpha44.020.7114
46 Mapoly0008s0135 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE; [KOG0582] Ste20-like serine/threonine protein kinase44.270.6374
47 Mapoly0022s0125 [PTHR19876:SF2] COATOMER BETA SUBUNIT; [GO:0016192] vesicle-mediated transport; [KOG0276] Vesicle coat complex COPI, beta' subunit; [GO:0005515] protein binding; [PTHR19876] COATOMER; [PF04053] Coatomer WD associated region; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [GO:0005198] structural molecule activity; [PF00400] WD domain, G-beta repeat46.500.6958
48 Mapoly0053s0089 [GO:0006904] vesicle docking involved in exocytosis; [GO:0016192] vesicle-mediated transport; [PTHR11679] VESICLE PROTEIN SORTING-ASSOCIATED; [KOG1300] Vesicle trafficking protein Sec1; [PF00995] Sec1 family47.620.6296
49 Mapoly0167s0007 [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [GO:0015031] protein transport; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [KOG1848] Uncharacterized conserved protein47.620.7307
50 Mapoly0045s0101 [KOG1396] Uncharacterized conserved protein; [PTHR12953] MEMBRANE PROTEIN CH1 RELATED; [PF07738] Sad1 / UNC-like C-terminal; [PTHR12953:SF1] MEMBRANE PROTEIN CH1 RELATED51.380.6242
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