Guide Gene

Gene ID
Mapoly0059s0053
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF01988] VIT family

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0059s0053 [PF01988] VIT family 0.00 1.0000
1 Mapoly0003s0222 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [K11592] endoribonuclease Dicer [EC:3.1.26.-]; [PF02170] PAZ domain; [3.1.26.-] Endoribonucleases producing 5'-phosphomonoesters.; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [GO:0005515] protein binding; [PF03368] Dicer dimerisation domain; [PF00636] Ribonuclease III domain; [PF00270] DEAD/DEAH box helicase; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1; [GO:0003676] nucleic acid binding; [KOG0701] dsRNA-specific nuclease Dicer and related ribonucleases1.000.8143
2 Mapoly0055s0021 -7.000.6934
3 Mapoly0105s0059 [PTHR31071] FAMILY NOT NAMED7.210.7387
4 Mapoly0019s0177 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [KOG0242] Kinesin-like protein; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity; [PF13920] Zinc finger, C3HC4 type (RING finger)9.170.7217
5 Mapoly0019s0074 [KOG0989] Replication factor C, subunit RFC4; [PF12169] DNA polymerase III subunits gamma and tau domain III; [PTHR11669] REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT; [PF13177] DNA polymerase III, delta subunit; [GO:0003887] DNA-directed DNA polymerase activity; [PTHR11669:SF0] SUBFAMILY NOT NAMED9.590.7192
6 Mapoly0115s0019 [GO:0016567] protein ubiquitination; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [KOG0823] Predicted E3 ubiquitin ligase; [GO:0004842] ubiquitin-protein ligase activity; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING; [PF04564] U-box domain10.720.6986
7 Mapoly0025s0065 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE15.390.5944
8 Mapoly0008s0135 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE; [KOG0582] Ste20-like serine/threonine protein kinase16.910.6554
9 Mapoly0057s0061 [PTHR31358] FAMILY NOT NAMED; [PF06886] Targeting protein for Xklp2 (TPX2)17.490.6710
10 Mapoly0016s0157 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.1.-] Phosphotransferases with an alcohol group as acceptor.; [PTHR24349] SERINE/THREONINE-PROTEIN KINASE; [GO:0006468] protein phosphorylation; [KOG0032] Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily; [K00924] phosphatidylinositol-4-phosphate 3-kinase [EC:2.7.1.154]21.910.6810
11 Mapoly0087s0079 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger)22.360.6881
12 Mapoly0075s0069 [GO:0030130] clathrin coat of trans-Golgi network vesicle; [GO:0016192] vesicle-mediated transport; [PTHR10639] CLATHRIN LIGHT CHAIN; [PF01086] Clathrin light chain; [GO:0006886] intracellular protein transport; [GO:0030132] clathrin coat of coated pit; [GO:0005198] structural molecule activity22.960.6712
13 Mapoly0012s0024 -23.110.6936
14 Mapoly0122s0054 [GO:0016020] membrane; [PF00989] PAS fold; [PF08446] PAS fold; [GO:0006355] regulation of transcription, DNA-dependent; [PF00360] Phytochrome region; [GO:0005515] protein binding; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [GO:0018298] protein-chromophore linkage; [K12121] phytochrome B; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity; [PF01590] GAF domain; [GO:0009584] detection of visible light25.220.6823
15 Mapoly0059s0047 [PTHR23092] TOPOISOMERASE-RELATED PROTEIN; [PF01909] Nucleotidyltransferase domain; [GO:0016779] nucleotidyltransferase activity; [PTHR23092:SF15] SUBFAMILY NOT NAMED; [PF10539] Development and cell death domain25.980.6923
16 Mapoly0022s0057 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [KOG1030] Predicted Ca2+-dependent phospholipid-binding protein; [PF00168] C2 domain; [GO:0005515] protein binding27.420.6228
17 Mapoly0015s0063 -27.910.6667
18 Mapoly0011s0209 -28.570.6931
19 Mapoly0081s0068 -30.200.6768
20 Mapoly0055s0098 [PTHR12363] TRANSPORTIN 3 AND IMPORTIN 13; [KOG2081] Nuclear transport regulator; [PF08389] Exportin 1-like protein30.400.6813
21 Mapoly0079s0057 [PF03828] Cid1 family poly A polymerase; [PTHR12271] POLY(A) POLYMERASE CID (PAP)-RELATED30.590.6819
22 Mapoly0111s0014 [GO:0005524] ATP binding; [KOG0055] Multidrug/pheromone exporter, ABC superfamily; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter31.460.5681
23 Mapoly0026s0028 [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF03000] NPH3 family; [PTHR32370] FAMILY NOT NAMED33.820.5859
24 Mapoly0070s0077 [PTHR21551] TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1; [PTHR21551:SF1] gb def: ENSANGP00000010369 (Fragment); [K12617] DNA topoisomerase 2-associated protein PAT134.940.6365
25 Mapoly0014s0165 -35.240.6173
26 Mapoly0049s0083 [PF05142] Domain of unknown function (DUF702); [PTHR31604] FAMILY NOT NAMED37.090.6377
27 Mapoly0083s0040 [PTHR32002] FAMILY NOT NAMED; [PF00564] PB1 domain; [PF02042] RWP-RK domain; [GO:0005515] protein binding37.150.6391
28 Mapoly0107s0053 [GO:0008601] protein phosphatase type 2A regulator activity; [PTHR10257] SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B; [GO:0000159] protein phosphatase type 2A complex; [KOG2085] Serine/threonine protein phosphatase 2A, regulatory subunit; [GO:0007165] signal transduction; [K11584] protein phosphatase 2 (formerly 2A), regulatory subunit B'; [PF01603] Protein phosphatase 2A regulatory B subunit (B56 family)38.960.6857
29 Mapoly0074s0026 [GO:0003677] DNA binding; [PF02362] B3 DNA binding domain; [GO:0008270] zinc ion binding; [PTHR23336] ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.; [PF07496] CW-type Zinc Finger41.570.6320
30 Mapoly0134s0035 [GO:0005515] protein binding; [GO:0007165] signal transduction; [KOG4462] WASP-interacting protein VRP1/WIP, contains WH2 domain; [GO:0043531] ADP binding; [PF13676] TIR domain; [PF00931] NB-ARC domain43.950.6020
31 Mapoly0031s0140 [GO:0016307] phosphatidylinositol phosphate kinase activity; [KOG0230] Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins; [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PF01504] Phosphatidylinositol-4-phosphate 5-Kinase; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [K00921] 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]; [2.7.1.150] 1-phosphatidylinositol-3-phosphate 5-kinase.; [GO:0046872] metal ion binding; [GO:0046488] phosphatidylinositol metabolic process; [PF01363] FYVE zinc finger45.550.6487
32 Mapoly0072s0011 [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [KOG1077] Vesicle coat complex AP-2, alpha subunit; [PF02883] Adaptin C-terminal domain; [PF02296] Alpha adaptin AP2, C-terminal domain; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [PTHR22780:SF4] ADAPTER-RELATED PROTEIN COMPLEX 2 ALPHA 1 SUBUNIT (ALPHA-ADAPTIN A); [K11824] AP-2 complex subunit alpha46.900.6655
33 Mapoly0020s0027 [GO:0003951] NAD+ kinase activity; [KOG2178] Predicted sugar kinase; [GO:0006741] NADP biosynthetic process; [GO:0008152] metabolic process; [PTHR20275] FAMILY NOT NAMED; [PF01513] ATP-NAD kinase47.180.6597
34 Mapoly0009s0021 [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [KOG1984] Vesicle coat complex COPII, subunit SFB3; [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [K14007] protein transport protein SEC24; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport; [PF00626] Gelsolin repeat48.470.6461
35 Mapoly0032s0168 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24058:SF17] DUAL SPECIFICITY PROTEIN KINASE YAK1; [PTHR24058] DUAL SPECIFICITY PROTEIN KINASE; [KOG0667] Dual-specificity tyrosine-phosphorylation regulated kinase; [GO:0006468] protein phosphorylation50.830.6296
36 Mapoly0082s0081 [PF05383] La domain; [KOG2590] RNA-binding protein LARP/SRO9 and related La domain proteins; [PTHR22792] LUPUS LA PROTEIN-RELATED52.970.6538
37 Mapoly0075s0036 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity55.680.5629
38 Mapoly0008s0071 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity; [K09285] AP2-like factor, ANT lineage; [PTHR32467] FAMILY NOT NAMED57.000.6144
39 Mapoly0130s0022 [GO:0008565] protein transporter activity; [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [GO:0015031] protein transport; [PTHR22780:SF5] ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA SUBUNIT (GAMMA-ADAPTIN); [PF02883] Adaptin C-terminal domain; [KOG1062] Vesicle coat complex AP-1, gamma subunit; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [K12391] AP-1 complex subunit gamma-1; [GO:0005794] Golgi apparatus57.060.6259
40 Mapoly0028s0118 [PF04852] Protein of unknown function (DUF640); [PTHR31165] FAMILY NOT NAMED58.650.6291
41 Mapoly0040s0140 [K14500] BR-signaling kinase [EC:2.7.11.1]; [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE59.250.6472
42 Mapoly0032s0040 [PF12872] OST-HTH/LOTUS domain59.870.6456
43 Mapoly0002s0170 [GO:0007264] small GTPase mediated signal transduction; [PTHR22964] MYOSIN LIGHT CHAIN KINASE-RELATED; [GO:0005622] intracellular; [GO:0005525] GTP binding; [PF08477] Miro-like protein60.100.6260
44 Mapoly0054s0081 [GO:0003677] DNA binding; [PF01426] BAH domain; [GO:0003682] chromatin binding; [PF08711] TFIIS helical bundle-like domain; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [KOG1886] BAH domain proteins; [PTHR15141] TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 361.580.6217
45 Mapoly0151s0019 [PF14309] Domain of unknown function (DUF4378); [PF14383] DUF761-associated sequence motif; [PF12552] Protein of unknown function (DUF3741); [PTHR21726] PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED62.630.6182
46 Mapoly0101s0040 [GO:0005524] ATP binding; [PF00485] Phosphoribulokinase / Uridine kinase family; [GO:0008152] metabolic process; [GO:0016301] kinase activity; [K00876] uridine kinase [EC:2.7.1.48]; [KOG4203] Armadillo/beta-Catenin/plakoglobin; [PTHR10285] URIDINE KINASE; [PF14681] Uracil phosphoribosyltransferase; [2.7.1.48] Uridine kinase.65.130.5730
47 Mapoly0004s0170 [PF04357] Family of unknown function (DUF490)66.040.6214
48 Mapoly0076s0015 [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase66.330.6208
49 Mapoly0124s0011 [KOG1825] Fry-like conserved proteins; [PF14225] Cell morphogenesis C-terminal; [PTHR12295] UNCHARACTERIZED; [PF14222] Cell morphogenesis N-terminal; [PF14228] Cell morphogenesis central region67.260.6410
50 Mapoly0079s0059 [PF00350] Dynamin family; [PTHR11566] DYNAMIN; [PTHR11566:SF12] DYNAMIN; [GO:0003924] GTPase activity; [GO:0005525] GTP binding68.930.5991
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