Guide Gene

Gene ID
Mapoly0082s0081
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF05383] La domain; [KOG2590] RNA-binding protein LARP/SRO9 and related La domain proteins; [PTHR22792] LUPUS LA PROTEIN-RELATED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0082s0081 [PF05383] La domain; [KOG2590] RNA-binding protein LARP/SRO9 and related La domain proteins; [PTHR22792] LUPUS LA PROTEIN-RELATED 0.00 1.0000
1 Mapoly0067s0081 [GO:0003723] RNA binding; [K13126] polyadenylate-binding protein; [PF00658] Poly-adenylate binding protein, unique domain; [KOG0123] Polyadenylate-binding protein (RRM superfamily); [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)1.000.8468
2 Mapoly0019s0051 [GO:0003723] RNA binding; [PTHR23270] PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5); [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF00575] S1 RNA binding domain; [KOG1070] rRNA processing protein Rrp5; [PF05843] Suppressor of forked protein (Suf)2.000.8432
3 Mapoly0154s0021 [GO:0003723] RNA binding; [PTHR23253] EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; [PF02854] MIF4G domain; [GO:0005515] protein binding; [KOG0401] Translation initiation factor 4F, ribosome/mRNA-bridging subunit (eIF-4G); [K03260] translation initiation factor eIF-4F; [PF02847] MA3 domain2.830.7937
4 Mapoly0063s0085 [KOG3655] Drebrins and related actin binding proteins; [PF04548] AIG1 family; [PTHR10903] GTPASE, IMAP FAMILY MEMBER-RELATED; [PF11886] Domain of unknown function (DUF3406); [GO:0005525] GTP binding3.000.8366
5 Mapoly0055s0098 [PTHR12363] TRANSPORTIN 3 AND IMPORTIN 13; [KOG2081] Nuclear transport regulator; [PF08389] Exportin 1-like protein3.610.7869
6 Mapoly0063s0034 [PTHR22050] RW1 PROTEIN HOMOLOG; [PF12371] Protein of unknown function (DUF3651)4.470.8090
7 Mapoly0069s0029 [PTHR10795:SF157] UNCHARACTERIZED; [KOG1114] Tripeptidyl peptidase II; [K01280] tripeptidyl-peptidase II [EC:3.4.14.10]; [GO:0004252] serine-type endopeptidase activity; [3.4.14.10] Tripeptidyl-peptidase II.; [PF00082] Subtilase family; [PF12580] Tripeptidyl peptidase II; [GO:0006508] proteolysis; [PTHR10795] PROPROTEIN CONVERTASE SUBTILISIN/KEXIN4.470.8131
8 Mapoly0009s0021 [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [KOG1984] Vesicle coat complex COPII, subunit SFB3; [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [K14007] protein transport protein SEC24; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport; [PF00626] Gelsolin repeat6.630.7887
9 Mapoly0107s0005 [GO:0008270] zinc ion binding; [PF01529] DHHC palmitoyltransferase; [PTHR22883] ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN7.480.7942
10 Mapoly0030s0078 [GO:0016597] amino acid binding; [PF01842] ACT domain; [GO:0006099] tricarboxylic acid cycle; [PTHR30523] PHOSPHOENOLPYRUVATE CARBOXYLASE; [PF00311] Phosphoenolpyruvate carboxylase; [GO:0008152] metabolic process; [GO:0008964] phosphoenolpyruvate carboxylase activity; [GO:0015977] carbon fixation7.750.7786
11 Mapoly0071s0016 [PF00183] Hsp90 protein; [GO:0005524] ATP binding; [GO:0006950] response to stress; [PTHR11528:SF41] SUBFAMILY NOT NAMED; [GO:0006457] protein folding; [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PTHR11528] HEAT SHOCK PROTEIN 90; [KOG0019] Molecular chaperone (HSP90 family); [GO:0051082] unfolded protein binding9.170.7813
12 Mapoly0069s0006 [PF05221] S-adenosyl-L-homocysteine hydrolase; [3.3.1.1] Adenosylhomocysteinase.; [GO:0004013] adenosylhomocysteinase activity; [KOG1370] S-adenosylhomocysteine hydrolase; [PTHR23420] ADENOSYLHOMOCYSTEINASE; [GO:0006730] one-carbon metabolic process; [K01251] adenosylhomocysteinase [EC:3.3.1.1]; [PF00670] S-adenosyl-L-homocysteine hydrolase, NAD binding domain9.380.7502
13 Mapoly0079s0059 [PF00350] Dynamin family; [PTHR11566] DYNAMIN; [PTHR11566:SF12] DYNAMIN; [GO:0003924] GTPase activity; [GO:0005525] GTP binding9.800.7144
14 Mapoly0135s0025 [PF13513] HEAT-like repeat; [GO:0005515] protein binding; [PTHR23346] TRANSLATIONAL ACTIVATOR GCN1-RELATED; [PF02985] HEAT repeat; [PTHR23346:SF7] TRANSLATIONAL ACTIVATOR GCN1-RELATED; [PF12074] Domain of unknown function (DUF3554); [KOG1242] Protein containing adaptin N-terminal region; [PF13646] HEAT repeats10.820.7937
15 Mapoly0005s0074 [GO:0000287] magnesium ion binding; [PTHR11902] ENOLASE; [PF03952] Enolase, N-terminal domain; [GO:0004634] phosphopyruvate hydratase activity; [GO:0006096] glycolysis; [PF00113] Enolase, C-terminal TIM barrel domain; [4.2.1.11] Phosphopyruvate hydratase.; [GO:0000015] phosphopyruvate hydratase complex; [K01689] enolase [EC:4.2.1.11]; [KOG2670] Enolase11.220.7664
16 Mapoly0016s0043 [2.7.2.4] Aspartate kinase.; [PF00742] Homoserine dehydrogenase; [GO:0016597] amino acid binding; [PTHR21499] ASPARTATE KINASE; [PF01842] ACT domain; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PF00696] Amino acid kinase family; [GO:0008152] metabolic process; [GO:0006520] cellular amino acid metabolic process; [K12524] bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]; [KOG0455] Homoserine dehydrogenase; [GO:0050661] NADP binding; [PF03447] Homoserine dehydrogenase, NAD binding domain; [1.1.1.3] Homoserine dehydrogenase.11.490.7956
17 Mapoly0083s0034 -14.490.7921
18 Mapoly0024s0126 [GO:0004471] malate dehydrogenase (decarboxylating) activity; [PF00390] Malic enzyme, N-terminal domain; [GO:0055114] oxidation-reduction process; [PTHR23406] MALIC ENZYME-RELATED; [PF03949] Malic enzyme, NAD binding domain; [KOG1257] NADP+-dependent malic enzyme; [GO:0051287] NAD binding; [PTHR23406:SF2] MALIC ENZYME16.970.7436
19 Mapoly0035s0045 [GO:0005524] ATP binding; [KOG0332] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K01529] dynamin GTPase [EC:3.6.5.5]; [3.6.1.-] In phosphorous-containing anhydrides.18.490.7617
20 Mapoly0107s0053 [GO:0008601] protein phosphatase type 2A regulator activity; [PTHR10257] SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B; [GO:0000159] protein phosphatase type 2A complex; [KOG2085] Serine/threonine protein phosphatase 2A, regulatory subunit; [GO:0007165] signal transduction; [K11584] protein phosphatase 2 (formerly 2A), regulatory subunit B'; [PF01603] Protein phosphatase 2A regulatory B subunit (B56 family)21.170.7750
21 Mapoly0040s0140 [K14500] BR-signaling kinase [EC:2.7.11.1]; [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE23.660.7403
22 Mapoly0003s0056 [PF02358] Trehalose-phosphatase; [GO:0005992] trehalose biosynthetic process; [GO:0003824] catalytic activity; [KOG1050] Trehalose-6-phosphate synthase component TPS1 and related subunits; [PF00982] Glycosyltransferase family 20; [PTHR10788] TREHALOSE-6-PHOSPHATE SYNTHASE23.960.7174
23 Mapoly0156s0007 [PF00072] Response regulator receiver domain; [PF00249] Myb-like DNA-binding domain; [PTHR31312] FAMILY NOT NAMED; [GO:0000160] phosphorelay signal transduction system; [GO:0003682] chromatin binding24.000.7869
24 Mapoly0034s0037 [K09667] polypeptide N-acetylglucosaminyltransferase [EC:2.4.1.-]; [KOG4626] O-linked N-acetylglucosamine transferase OGT; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00515] Tetratricopeptide repeat; [PF13844] Glycosyl transferase family 41; [2.4.1.-] Hexosyltransferases.; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR24.190.7188
25 Mapoly0035s0034 [K01939] adenylosuccinate synthase [EC:6.3.4.4]; [KOG1355] Adenylosuccinate synthase; [PF00709] Adenylosuccinate synthetase; [PTHR11846:SF0] ADENYLOSUCCINATE SYNTHETASE; [6.3.4.4] Adenylosuccinate synthase.; [PTHR11846] ADENYLOSUCCINATE SYNTHETASE; [GO:0006164] purine nucleotide biosynthetic process; [GO:0005525] GTP binding; [GO:0004019] adenylosuccinate synthase activity24.740.7665
26 Mapoly0153s0017 [PTHR12860] SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN; [KOG2460] Signal recognition particle, subunit Srp68; [K03107] signal recognition particle subunit SRP6825.300.7288
27 Mapoly0059s0047 [PTHR23092] TOPOISOMERASE-RELATED PROTEIN; [PF01909] Nucleotidyltransferase domain; [GO:0016779] nucleotidyltransferase activity; [PTHR23092:SF15] SUBFAMILY NOT NAMED; [PF10539] Development and cell death domain26.460.7422
28 Mapoly0016s0067 [GO:0005524] ATP binding; [PTHR31187:SF0] SUBFAMILY NOT NAMED; [GO:0005471] ATP:ADP antiporter activity; [K03301] ATP:ADP antiporter, AAA family; [GO:0016021] integral to membrane; [PTHR31187] FAMILY NOT NAMED; [GO:0006810] transport; [PF03219] TLC ATP/ADP transporter31.220.6857
29 Mapoly0086s0041 [GO:0050660] flavin adenine dinucleotide binding; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [1.8.1.4] Dihydrolipoyl dehydrogenase.; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [K00382] dihydrolipoamide dehydrogenase [EC:1.8.1.4]; [GO:0016491] oxidoreductase activity; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [KOG1335] Dihydrolipoamide dehydrogenase; [PF07992] Pyridine nucleotide-disulphide oxidoreductase33.470.7593
30 Mapoly0002s0106 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE37.110.6822
31 Mapoly0076s0015 [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase38.080.6990
32 Mapoly0099s0038 [PF00564] PB1 domain; [GO:0005515] protein binding; [PTHR22904:SF22] GB DEF: HYPOTHETICAL PROTEIN; [PF13414] TPR repeat; [KOG4151] Myosin assembly protein/sexual cycle protein and related proteins; [PTHR22904] TPR REPEAT CONTAINING PROTEIN38.540.7407
33 Mapoly0001s0565 [PTHR31949] FAMILY NOT NAMED38.880.7239
34 Mapoly0049s0019 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [KOG0057] Mitochondrial Fe/S cluster exporter, ABC superfamily; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [K05663] mitochondrial ABC transporter ATM; [PTHR24221] FAMILY NOT NAMED; [PTHR24221:SF18] SUBFAMILY NOT NAMED; [PF00005] ABC transporter40.980.6900
35 Mapoly0024s0081 [KOG0278] Serine/threonine kinase receptor-associated protein; [GO:0005515] protein binding; [PTHR19877] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat41.890.6549
36 Mapoly0105s0059 [PTHR31071] FAMILY NOT NAMED43.010.7134
37 Mapoly0005s0203 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF00313] 'Cold-shock' DNA-binding domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [PTHR11544] COLD SHOCK DOMAIN CONTAINING PROTEINS; [K09250] cellular nucleic acid-binding protein; [GO:0003676] nucleic acid binding; [KOG3070] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing43.710.7515
38 Mapoly0044s0032 [PTHR12299] HYALURONIC ACID-BINDING PROTEIN 4; [PF09598] Stm1; [KOG2945] Predicted RNA-binding protein; [PF04774] Hyaluronan / mRNA binding family; [K13199] plasminogen activator inhibitor 1 RNA-binding protein43.750.7395
39 Mapoly0063s0052 [PF05097] Protein of unknown function (DUF688)44.630.6811
40 Mapoly0111s0056 [GO:0003723] RNA binding; [PF10150] Ribonuclease E/G family; [PTHR30001] RIBONUCLEASE; [PF00686] Starch binding domain45.500.7366
41 Mapoly0004s0166 [PTHR22904:SF7] SGT-1-RELATED; [PF13414] TPR repeat; [PF00226] DnaJ domain; [PTHR22904] TPR REPEAT CONTAINING PROTEIN46.260.6164
42 Mapoly0060s0041 [PF05303] Protein of unknown function (DUF727); [PF12807] Translation initiation factor eIF3 subunit 135; [PF13236] Clustered mitochondria; [PF13424] Tetratricopeptide repeat; [PTHR12601] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3); [PF15044] Mitochondrial function, CLU-N-term46.310.7277
43 Mapoly0002s0192 -46.990.7159
44 Mapoly0102s0016 [GO:0055114] oxidation-reduction process; [PTHR11063] GLUTAMATE SEMIALDEHYDE DEHYDROGENASE; [KOG4165] Gamma-glutamyl phosphate reductase; [GO:0016491] oxidoreductase activity; [K12657] delta-1-pyrroline-5-carboxylate synthetase [EC:2.7.2.11 1.2.1.41]; [2.7.2.11] Glutamate 5-kinase.; [PF00696] Amino acid kinase family; [GO:0008152] metabolic process; [1.2.1.41] Glutamate-5-semialdehyde dehydrogenase.; [PF00171] Aldehyde dehydrogenase family47.190.6490
45 Mapoly0003s0222 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [K11592] endoribonuclease Dicer [EC:3.1.26.-]; [PF02170] PAZ domain; [3.1.26.-] Endoribonucleases producing 5'-phosphomonoesters.; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [GO:0005515] protein binding; [PF03368] Dicer dimerisation domain; [PF00636] Ribonuclease III domain; [PF00270] DEAD/DEAH box helicase; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1; [GO:0003676] nucleic acid binding; [KOG0701] dsRNA-specific nuclease Dicer and related ribonucleases48.400.6909
46 Mapoly0021s0145 [PF02493] MORN repeat48.930.7201
47 Mapoly0022s0090 [KOG0959] N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily; [PTHR11851:SF34] PITRILYSIN; [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16)49.640.6789
48 Mapoly0019s0177 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [KOG0242] Kinesin-like protein; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity; [PF13920] Zinc finger, C3HC4 type (RING finger)50.950.6986
49 Mapoly0126s0032 -51.620.6954
50 Mapoly0030s0106 [GO:0031072] heat shock protein binding; [KOG0715] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24076] FAMILY NOT NAMED; [PF00684] DnaJ central domain; [GO:0051082] unfolded protein binding52.320.7483
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