Guide Gene

Gene ID
Mapoly0006s0115
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0006s0115 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain 0.00 1.0000
1 Mapoly0045s0119 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR13161] SPLICING FACTOR (SUPPRESSOR OF WHITE APRICOT); [PF01805] Surp module; [PF09750] Alternative splicing regulator; [KOG1847] mRNA splicing factor5.570.7957
2 Mapoly0019s0079 -6.710.7036
3 Mapoly0036s0066 [PTHR31960] FAMILY NOT NAMED; [PF14299] Phloem protein 26.710.7589
4 Mapoly0045s0115 -7.480.7285
5 Mapoly0188s0016 -7.550.7697
6 Mapoly0037s0071 [GO:0006355] regulation of transcription, DNA-dependent; [KOG0835] Cyclin L; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [PTHR10026:SF13] CYCLIN-L1-RELATED; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity7.750.7727
7 Mapoly0001s0125 -8.000.7242
8 Mapoly0006s0120 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF00139] Legume lectin domain; [GO:0030246] carbohydrate binding; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE9.800.7582
9 Mapoly0001s0415 [PF05641] Agenet domain10.490.7230
10 Mapoly0143s0016 -12.000.7119
11 Mapoly0158s0019 [PTHR24012] FAMILY NOT NAMED; [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)13.560.7668
12 Mapoly0132s0053 [GO:0008270] zinc ion binding; [PF02622] Uncharacterized ACR, COG1678; [PF12906] RING-variant domain; [PTHR23012] MEMBRANE ASSOCIATED RING FINGER14.140.6895
13 Mapoly0152s0016 [KOG1771] GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis; [K05286] phosphatidylinositol glycan, class B [EC:2.4.1.-]; [PF03901] Alg9-like mannosyltransferase family; [PTHR22760] GLYCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups; [2.4.1.-] Hexosyltransferases.14.390.6077
14 Mapoly0025s0084 -14.870.7001
15 Mapoly0031s0062 -20.070.7045
16 Mapoly0061s0115 [PTHR23079] RNA-DEPENDENT RNA POLYMERASE; [GO:0003968] RNA-directed RNA polymerase activity; [PTHR23079:SF1] RNA-DEPENDENT RNA POLYMERASE; [KOG0988] RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference; [PF05183] RNA dependent RNA polymerase20.980.6617
17 Mapoly0021s0158 [GO:0008168] methyltransferase activity; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [PTHR11006:SF4] PROTEIN ARGININE N-METHYLTRANSFERASE 7; [GO:0006479] protein methylation21.490.6888
18 Mapoly0008s0182 [3.1.2.15] Ubiquitin thiolesterase.; [K11851] ubiquitin carboxyl-terminal hydrolase 30 [EC:3.1.2.15]; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR24006] FAMILY NOT NAMED23.000.6841
19 Mapoly0070s0005 [KOG0286] G-protein beta subunit; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat25.810.6983
20 Mapoly0030s0084 [PTHR10848] MEIOTIC RECOMBINATION PROTEIN SPO11; [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0006259] DNA metabolic process; [PF04406] Type IIB DNA topoisomerase; [GO:0000737] DNA catabolic process, endonucleolytic; [GO:0005694] chromosome; [GO:0003824] catalytic activity; [PTHR10848:SF1] gb def: meiotic recombination protein rec12 related protein [imported] - neurospora cras; [KOG2795] Catalytic subunit of the meiotic double strand break transesterase26.400.6598
21 Mapoly0001s0066 [PF04884] Vitamin B6 photo-protection and homoeostasis; [KOG4249] Uncharacterized conserved protein; [PTHR12770] FAMILY NOT NAMED27.420.7035
22 Mapoly0129s0044 -27.840.6816
23 Mapoly0029s0009 [PF12313] NPR1/NIM1 like defence protein C terminal; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN27.980.6750
24 Mapoly0181s0006 [PF13414] TPR repeat; [PTHR14699:SF0] SUBFAMILY NOT NAMED; [PTHR14699] STI2 PROTEIN-RELATED31.810.7129
25 Mapoly0116s0006 [PF00651] BTB/POZ domain; [PF07707] BTB And C-terminal Kelch; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN32.330.6951
26 Mapoly0002s0236 [PTHR10782:SF4] SUBFAMILY NOT NAMED; [PTHR10782] ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [GO:0019789] SUMO ligase activity; [PF02891] MIZ/SP-RING zinc finger32.590.7238
27 Mapoly0006s0003 -33.230.6497
28 Mapoly0056s0014 [GO:0016021] integral to membrane; [KOG3574] Acetyl-CoA transporter; [GO:0008521] acetyl-CoA transporter activity; [PTHR12778:SF3] SOLUTE CARRIER FAMILY 33 (ACETYL-COA TRANSPORTER); [PF13000] Acetyl-coenzyme A transporter 1; [PTHR12778] SOLUTE CARRIER FAMILY 33 (ACETYL-COA TRANSPORTER)-RELATED34.210.6621
29 Mapoly0013s0097 -34.410.6688
30 Mapoly0063s0009 -34.580.6304
31 Mapoly0045s0077 [PTHR11807:SF2] CELL CYCLE PROTEIN MESJ; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PTHR11807] ATPASES OF THE PP SUPERFAMILY-RELATED; [GO:0016879] ligase activity, forming carbon-nitrogen bonds; [PF01171] PP-loop family; [GO:0008033] tRNA processing36.030.6871
32 Mapoly0245s0003 [PTHR31061] FAMILY NOT NAMED; [KOG4683] Uncharacterized conserved protein; [PF07786] Protein of unknown function (DUF1624); [K10532] heparan-alpha-glucosaminide N-acetyltransferase [EC:2.3.1.78]; [2.3.1.78] Heparan-alpha-glucosaminide N-acetyltransferase.37.520.6511
33 Mapoly0004s0045 -38.790.6513
34 Mapoly0113s0031 [GO:0016020] membrane; [K10085] ER degradation enhancer, mannosidase alpha-like 2; [PTHR11742] MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED; [GO:0005509] calcium ion binding; [GO:0004571] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; [PF01532] Glycosyl hydrolase family 47; [KOG2429] Glycosyl hydrolase, family 4740.790.6151
35 Mapoly0125s0024 -43.130.6690
36 Mapoly0058s0068 [GO:0003677] DNA binding; [GO:0006284] base-excision repair; [PTHR10359] A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [PTHR10359:SF16] ENDONUCLEASE III; [KOG1921] Endonuclease III; [PF00633] Helix-hairpin-helix motif; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K10773] endonuclease III [EC:4.2.99.18]50.910.6069
37 Mapoly0001s0409 [GO:0051260] protein homooligomerization; [PF00805] Pentapeptide repeats (8 copies); [PTHR14958] POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN; [PF02214] BTB/POZ domain; [KOG1665] AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats51.180.5767
38 Mapoly0001s0020 [PF13837] Myb/SANT-like DNA-binding domain51.960.5691
39 Mapoly0001s0473 -52.520.7037
40 Mapoly0005s0105 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR57.160.6687
41 Mapoly0001s0070 [PTHR10994] RETICULON; [PF02453] Reticulon; [KOG1792] Reticulon58.570.6075
42 Mapoly0072s0033 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family61.730.6631
43 Mapoly0078s0005 [PF14792] DNA polymerase beta palm; [GO:0003677] DNA binding; [KOG2534] DNA polymerase IV (family X); [PF14791] DNA polymerase beta thumb; [GO:0005634] nucleus; [GO:0034061] DNA polymerase activity; [PTHR11276] DNA POLYMERASE TYPE-X FAMILY MEMBER; [PTHR11276:SF1] DNA POLYMERASE TYPE-X FAMILY MEMBER; [PF14716] Helix-hairpin-helix domain; [PF10391] Fingers domain of DNA polymerase lambda61.870.5281
44 Mapoly0008s0026 [GO:0019773] proteasome core complex, alpha-subunit complex; [PTHR11599:SF14] PROTEASOME SUBUNIT ALPHA TYPE 5; [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0176] 20S proteasome, regulatory subunit alpha type PSMA5/PUP2; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA62.930.6632
45 Mapoly0076s0037 [PF06101] Plant protein of unknown function (DUF946); [PF09333] ATG C terminal domain; [PF06650] Protein of unknown function (DUF1162); [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PTHR16166:SF61] PUTATIVE UNCHARACTERIZED PROTEIN64.300.6298
46 Mapoly0218s0012 [PTHR15744:SF0] SUBFAMILY NOT NAMED; [PTHR15744] BLOM764.620.6717
47 Mapoly0067s0004 [KOG0005] Ubiquitin-like protein; [PTHR15204:SF1] SCYTHE/BAT3; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR15204] SCYTHE/BAT365.310.6295
48 Mapoly0073s0007 [PTHR32161] FAMILY NOT NAMED; [PF07676] WD40-like Beta Propeller Repeat; [PTHR32161:SF1] SUBFAMILY NOT NAMED65.730.5482
49 Mapoly0072s0016 [GO:0005515] protein binding; [PTHR15398] BROMODOMAIN-CONTAINING PROTEIN 8; [PF00439] Bromodomain; [K11321] bromodomain-containing protein 8; [PTHR15398:SF0] SUBFAMILY NOT NAMED67.190.6659
50 Mapoly0005s0111 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR67.310.6692
Showing 1 to 50 of 200 records
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