Guide Gene

Gene ID
Mapoly0078s0005
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF14792] DNA polymerase beta palm; [GO:0003677] DNA binding; [KOG2534] DNA polymerase IV (family X); [PF14791] DNA polymerase beta thumb; [GO:0005634] nucleus; [GO:0034061] DNA polymerase activity; [PTHR11276] DNA POLYMERASE TYPE-X FAMILY MEMBER; [PTHR11276:SF1] DNA POLYMERASE TYPE-X FAMILY MEMBER; [PF14716] Helix-hairpin-helix domain; [PF10391] Fingers domain of DNA polymerase lambda

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0078s0005 [PF14792] DNA polymerase beta palm; [GO:0003677] DNA binding; [KOG2534] DNA polymerase IV (family X); [PF14791] DNA polymerase beta thumb; [GO:0005634] nucleus; [GO:0034061] DNA polymerase activity; [PTHR11276] DNA POLYMERASE TYPE-X FAMILY MEMBER; [PTHR11276:SF1] DNA POLYMERASE TYPE-X FAMILY MEMBER; [PF14716] Helix-hairpin-helix domain; [PF10391] Fingers domain of DNA polymerase lambda 0.00 1.0000
1 Mapoly0120s0019 [PF13855] Leucine rich repeat; [GO:0005515] protein binding; [PTHR23155] LEUCINE-RICH REPEAT-CONTAINING PROTEIN; [GO:0043531] ADP binding; [PF00931] NB-ARC domain4.000.5992
2 Mapoly0113s0031 [GO:0016020] membrane; [K10085] ER degradation enhancer, mannosidase alpha-like 2; [PTHR11742] MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED; [GO:0005509] calcium ion binding; [GO:0004571] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; [PF01532] Glycosyl hydrolase family 47; [KOG2429] Glycosyl hydrolase, family 474.360.6304
3 Mapoly0025s0084 -8.830.6264
4 Mapoly0007s0025 -9.220.5382
5 Mapoly0058s0068 [GO:0003677] DNA binding; [GO:0006284] base-excision repair; [PTHR10359] A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [PTHR10359:SF16] ENDONUCLEASE III; [KOG1921] Endonuclease III; [PF00633] Helix-hairpin-helix motif; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K10773] endonuclease III [EC:4.2.99.18]15.170.5915
6 Mapoly0008s0182 [3.1.2.15] Ubiquitin thiolesterase.; [K11851] ubiquitin carboxyl-terminal hydrolase 30 [EC:3.1.2.15]; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR24006] FAMILY NOT NAMED16.700.6086
7 Mapoly0197s0015 -17.750.5619
8 Mapoly0023s0135 [PTHR11409:SF21] ADENOSINE DEAMINASE-LIKE PROTEIN; [PTHR11409] ADENOSINE DEAMINASE; [PF00962] Adenosine/AMP deaminase; [KOG1097] Adenine deaminase/adenosine deaminase; [3.5.4.4] Adenosine deaminase.; [GO:0019239] deaminase activity; [K01488] adenosine deaminase [EC:3.5.4.4]22.910.5727
9 Mapoly0086s0017 [GO:0005515] protein binding; [PTHR31482] FAMILY NOT NAMED; [PF00646] F-box domain30.460.5115
10 Mapoly0118s0035 [PF07279] Protein of unknown function (DUF1442); [PTHR31096] FAMILY NOT NAMED30.590.5452
11 Mapoly0046s0119 [PF01545] Cation efflux family; [KOG1484] Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily); [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [K03295] cation efflux system protein, CDF family; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity; [PTHR11562] CATION EFFLUX PROTEIN/ ZINC TRANSPORTER37.080.5513
12 Mapoly0045s0077 [PTHR11807:SF2] CELL CYCLE PROTEIN MESJ; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PTHR11807] ATPASES OF THE PP SUPERFAMILY-RELATED; [GO:0016879] ligase activity, forming carbon-nitrogen bonds; [PF01171] PP-loop family; [GO:0008033] tRNA processing39.040.5754
13 Mapoly0011s0097 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [K06892] ATP-dependent Clp protease adaptor protein ClpS; [PF03171] 2OG-Fe(II) oxygenase superfamily39.500.5150
14 Mapoly0001s0415 [PF05641] Agenet domain40.690.5680
15 Mapoly0036s0066 [PTHR31960] FAMILY NOT NAMED; [PF14299] Phloem protein 240.990.5604
16 Mapoly0132s0053 [GO:0008270] zinc ion binding; [PF02622] Uncharacterized ACR, COG1678; [PF12906] RING-variant domain; [PTHR23012] MEMBRANE ASSOCIATED RING FINGER42.490.5343
17 Mapoly0033s0125 [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PTHR11452] ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE; [PF02065] Melibiase43.950.5485
18 Mapoly0118s0028 -47.370.4713
19 Mapoly0122s0046 [PTHR12862] BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN; [KOG1794] N-Acetylglucosamine kinase; [PF01869] BadF/BadG/BcrA/BcrD ATPase family; [PTHR12862:SF0] SUBFAMILY NOT NAMED47.370.5115
20 Mapoly0001s0125 -54.000.5363
21 Mapoly0102s0038 [KOG2091] Predicted member of glycosyl hydrolase family 18; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [PTHR11177] CHITINASE; [GO:0005975] carbohydrate metabolic process; [PF00704] Glycosyl hydrolases family 1857.240.5215
22 Mapoly0031s0062 -59.160.5431
23 Mapoly0168s0013 -60.150.4047
24 Mapoly0006s0115 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain61.870.5281
25 Mapoly0019s0043 [PF12937] F-box-like; [GO:0005515] protein binding; [PF08495] FIST N domain62.930.4690
26 Mapoly0002s0030 -63.500.4934
27 Mapoly0245s0003 [PTHR31061] FAMILY NOT NAMED; [KOG4683] Uncharacterized conserved protein; [PF07786] Protein of unknown function (DUF1624); [K10532] heparan-alpha-glucosaminide N-acetyltransferase [EC:2.3.1.78]; [2.3.1.78] Heparan-alpha-glucosaminide N-acetyltransferase.64.160.5284
28 Mapoly0052s0063 [GO:0016020] membrane; [GO:0003333] amino acid transmembrane transport; [K13868] solute carrier family 7 (L-type amino acid transporter), member 9; [PF13520] Amino acid permease; [PTHR11785] AMINO ACID TRANSPORTER; [KOG1287] Amino acid transporters; [GO:0015171] amino acid transmembrane transporter activity66.090.5201
29 Mapoly0111s0008 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [KOG0940] Ubiquitin protein ligase RSP5/NEDD4; [6.3.2.19] Ubiquitin--protein ligase.; [K10591] E3 ubiquitin-protein ligase NEDD4 [EC:6.3.2.19]; [GO:0004842] ubiquitin-protein ligase activity; [PF00632] HECT-domain (ubiquitin-transferase)67.640.5228
30 Mapoly0045s0115 -67.810.5032
31 Mapoly0046s0074 [PF08569] Mo25-like; [KOG1566] Conserved protein Mo25; [PTHR10182] CALCIUM-BINDING PROTEIN 39-RELATED; [K08272] calcium binding protein 3969.380.5179
32 Mapoly0011s0011 [2.7.7.1] Nicotinamide-nucleotide adenylyltransferase.; [GO:0009058] biosynthetic process; [K06210] nicotinamide mononucleotide adenylyltransferase [EC:2.7.7.1 2.7.7.18]; [KOG3199] Nicotinamide mononucleotide adenylyl transferase; [PTHR12039:SF0] SUBFAMILY NOT NAMED; [GO:0009435] NAD biosynthetic process; [PF01467] Cytidylyltransferase; [GO:0016779] nucleotidyltransferase activity; [GO:0003824] catalytic activity; [PF13837] Myb/SANT-like DNA-binding domain; [2.7.7.18] Nicotinate-nucleotide adenylyltransferase.; [PTHR12039] NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE75.600.5420
33 Mapoly0010s0174 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [KOG0192] Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs; [PTHR23257] SERINE-THREONINE PROTEIN KINASE; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation76.430.5272
34 Mapoly0078s0007 [K13983] putative helicase MOV10L1 [EC:3.6.4.13]; [KOG1804] RNA helicase; [3.6.4.13] RNA helicase.; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain77.540.5074
35 Mapoly0009s0041 [PF01501] Glycosyl transferase family 8; [KOG1950] Glycosyl transferase, family 8 - glycogenin; [PTHR11183] GLYCOGENIN; [GO:0016757] transferase activity, transferring glycosyl groups77.940.4983
36 Mapoly0111s0043 [GO:0005524] ATP binding; [KOG0661] MAPK related serine/threonine protein kinase; [K08829] male germ cell-associated kinase [EC:2.7.11.22]; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24055:SF52] MEIOSIS INDUCTION PROTEIN KINASE IME2/SME1; [PTHR24055] MITOGEN-ACTIVATED PROTEIN KINASE; [GO:0006468] protein phosphorylation; [2.7.11.22] Cyclin-dependent kinase.78.940.5024
37 Mapoly0006s0003 -79.130.5126
38 Mapoly0132s0014 [PF12937] F-box-like; [GO:0005515] protein binding81.380.5000
39 Mapoly0152s0016 [KOG1771] GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis; [K05286] phosphatidylinositol glycan, class B [EC:2.4.1.-]; [PF03901] Alg9-like mannosyltransferase family; [PTHR22760] GLYCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups; [2.4.1.-] Hexosyltransferases.81.830.4525
40 Mapoly0029s0029 [PF00923] Transaldolase; [PTHR10683] TRANSALDOLASE; [GO:0005975] carbohydrate metabolic process82.220.5312
41 Mapoly0153s0025 -86.320.4815
42 Mapoly0005s0082 -86.430.4192
43 Mapoly0030s0084 [PTHR10848] MEIOTIC RECOMBINATION PROTEIN SPO11; [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0006259] DNA metabolic process; [PF04406] Type IIB DNA topoisomerase; [GO:0000737] DNA catabolic process, endonucleolytic; [GO:0005694] chromosome; [GO:0003824] catalytic activity; [PTHR10848:SF1] gb def: meiotic recombination protein rec12 related protein [imported] - neurospora cras; [KOG2795] Catalytic subunit of the meiotic double strand break transesterase90.770.5026
44 Mapoly0060s0006 [GO:0016021] integral to membrane; [PF03124] EXS family; [PTHR10783] XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED; [PTHR10783:SF9] EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN91.830.5414
45 Mapoly0116s0006 [PF00651] BTB/POZ domain; [PF07707] BTB And C-terminal Kelch; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN92.080.5209
46 Mapoly0116s0052 [GO:0030833] regulation of actin filament polymerization; [GO:0005515] protein binding; [KOG1523] Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC; [PTHR10709] ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1; [GO:0005856] cytoskeleton; [GO:0003779] actin binding; [PTHR10709:SF2] ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1; [K05757] actin related protein 2/3 complex, subunit 1A/1B; [PF00400] WD domain, G-beta repeat95.440.4973
47 Mapoly0066s0053 [PTHR23056] CALCINEURIN B; [K06268] protein phosphatase 3, regulatory subunit; [PF13499] EF-hand domain pair; [PF13833] EF-hand domain pair; [KOG0034] Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein; [GO:0005509] calcium ion binding98.590.4768
48 Mapoly0129s0044 -104.500.5076
49 Mapoly0037s0071 [GO:0006355] regulation of transcription, DNA-dependent; [KOG0835] Cyclin L; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [PTHR10026:SF13] CYCLIN-L1-RELATED; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity106.550.5270
50 Mapoly0132s0022 [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity106.730.4742
Showing 1 to 50 of 200 records
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