Guide Gene
- Gene ID
- Mapoly0042s0051
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF06694] Plant nuclear matrix protein 1 (NMP1); [PTHR14352] FAMILY NOT NAMED
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0042s0051 [PF06694] Plant nuclear matrix protein 1 (NMP1); [PTHR14352] FAMILY NOT NAMED 0.00 1.0000 1 Mapoly0019s0153 [GO:0005524] ATP binding; [GO:0005674] transcription factor TFIIF complex; [PTHR10445:SF0] GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2; [KOG2905] Transcription initiation factor IIF, small subunit (RAP30); [3.6.4.12] DNA helicase.; [K03139] transcription initiation factor TFIIF subunit beta [EC:3.6.4.12]; [PF02270] Transcription initiation factor IIF, beta subunit; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PTHR10445] GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 2.45 0.7583 2 Mapoly0001s0482 [PF05764] YL1 nuclear protein; [KOG2897] DNA-binding protein YL1 and related proteins; [GO:0006355] regulation of transcription, DNA-dependent; [PF08265] YL1 nuclear protein C-terminal domain; [K11664] vacuolar protein sorting-associated protein 72; [GO:0005634] nucleus; [PTHR13275] YL-1 PROTEIN (TRANSCRIPTION FACTOR-LIKE 1) 8.00 0.7917 3 Mapoly0030s0047 [PF07572] Bucentaur or craniofacial development; [KOG4776] Uncharacterized conserved protein BCNT; [PTHR23227] BUCENTAUR RELATED 13.56 0.7711 4 Mapoly0002s0008 - 14.70 0.7492 5 Mapoly0026s0023 [KOG3263] Nucleic acid binding protein; [PF08648] Protein of unknown function (DUF1777); [PTHR31077] FAMILY NOT NAMED; [K12846] U4/U6.U5 tri-snRNP-associated protein 3 22.58 0.7353 6 Mapoly0119s0045 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [PTHR24115:SF194] SUBFAMILY NOT NAMED; [KOG0242] Kinesin-like protein; [GO:0005871] kinesin complex; [K10397] kinesin family member 6/9; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity 25.20 0.7547 7 Mapoly0052s0020 [K03424] TatD DNase family protein [EC:3.1.21.-]; [GO:0016888] endodeoxyribonuclease activity, producing 5'-phosphomonoesters; [KOG3020] TatD-related DNase; [3.1.21.-] Endodeoxyribonucleases producing 5'-phosphomonoesters.; [PF01026] TatD related DNase; [PTHR10060] TATD FAMILY DEOXYRIBONUCLEASE 25.69 0.7445 8 Mapoly0206s0003 - 26.23 0.7555 9 Mapoly0086s0048 [PTHR22936:SF17] RHOMBOID 1; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis 26.51 0.7327 10 Mapoly0035s0096 [PF01426] BAH domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR 29.93 0.7432 11 Mapoly0044s0100 [K03847] alpha-1,6-mannosyltransferase [EC:2.4.1.130]; [PTHR22760:SF1] GLYCOSYLTRANSFERASE; [KOG2516] Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family); [PF03901] Alg9-like mannosyltransferase family; [PTHR22760] GLYCOSYLTRANSFERASE; [2.4.1.130] Transferred entry: 2.4.1.258, 2.4.1.259, 2.4.1.260 and 2.4.1.261.; [GO:0016757] transferase activity, transferring glycosyl groups 30.89 0.7337 12 Mapoly0066s0098 [GO:0006284] base-excision repair; [KOG2875] 8-oxoguanine DNA glycosylase; [GO:0006289] nucleotide-excision repair; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [PTHR10242] N-GLYCOSYLASE/DNA LYASE; [PF07934] 8-oxoguanine DNA glycosylase, N-terminal domain; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K03660] N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]; [GO:0003684] damaged DNA binding; [GO:0008534] oxidized purine nucleobase lesion DNA N-glycosylase activity; [3.2.2.-] Hydrolyzing N-glycosyl compounds. 31.62 0.7482 13 Mapoly0002s0307 [GO:0005524] ATP binding; [PTHR30160] TETRAACYLDISACCHARIDE 4'-KINASE-RELATED; [PF02606] Tetraacyldisaccharide-1-P 4'-kinase; [PTHR30160:SF0] TETRAACYLDISACCHARIDE 4-KINASE; [GO:0009029] tetraacyldisaccharide 4'-kinase activity; [GO:0009245] lipid A biosynthetic process 33.05 0.7081 14 Mapoly0161s0009 [GO:0003723] RNA binding; [PTHR13452] THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; [PF02926] THUMP domain 35.21 0.7517 15 Mapoly0001s0487 [PTHR16216:SF2] SUBFAMILY NOT NAMED; [PTHR16216] FAMILY NOT NAMED 36.91 0.7545 16 Mapoly0011s0128 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 37.82 0.7437 17 Mapoly0095s0037 [PTHR14003:SF1] YY1-RELATED; [PF13465] Zinc-finger double domain; [PTHR14003] TRANSCRIPTIONAL REPRESSOR PROTEIN YY; [PF13894] C2H2-type zinc finger 38.50 0.7089 18 Mapoly0054s0019 [PTHR16105:SF0] SUBFAMILY NOT NAMED; [PTHR16105] UNCHARACTERIZED; [GO:0003676] nucleic acid binding; [K13157] U11/U12 small nuclear ribonucleoprotein 65 kDa protein; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39.69 0.7321 19 Mapoly0030s0010 - 39.76 0.7118 20 Mapoly0096s0024 [3.1.26.5] Ribonuclease P.; [PTHR10993] OCTANOYLTRANSFERASE; [K03537] ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]; [GO:0008033] tRNA processing; [PF01900] Rpp14/Pop5 family; [KOG4639] RNase P/RNase MRP subunit POP5; [GO:0004540] ribonuclease activity 41.95 0.6523 21 Mapoly0187s0004 [KOG0533] RRM motif-containing protein; [PTHR15241] TRANSFORMER-2-RELATED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42.21 0.7220 22 Mapoly0076s0064 [KOG0027] Calmodulin and related proteins (EF-Hand superfamily) 42.85 0.7106 23 Mapoly0011s0185 [KOG0919] C-5 cytosine-specific DNA methylase; [GO:0008168] methyltransferase activity; [PTHR10629] CYTOSINE-SPECIFIC METHYLTRANSFERASE; [K00558] DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]; [PF00145] C-5 cytosine-specific DNA methylase; [2.1.1.37] DNA (cytosine-5-)-methyltransferase. 43.31 0.7538 24 Mapoly0002s0306 [GO:0016763] transferase activity, transferring pentosyl groups; [PF04179] Initiator tRNA phosphoribosyl transferase; [KOG2634] Initiator tRNA phosphoribosyl-transferase; [PTHR31811:SF0] SUBFAMILY NOT NAMED; [PTHR31811] FAMILY NOT NAMED 43.47 0.7106 25 Mapoly0089s0068 [PTHR21683] UNCHARACTERIZED; [PF13863] Domain of unknown function (DUF4200); [PTHR21683:SF2] SUBFAMILY NOT NAMED 43.47 0.7371 26 Mapoly0091s0021 [PTHR13135] CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26; [PF10258] PHAX RNA-binding domain; [KOG3948] Mediator of U snRNA nuclear export PHAX 46.08 0.7461 27 Mapoly0057s0085 - 47.72 0.7112 28 Mapoly0027s0068 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger) 57.97 0.7112 29 Mapoly0123s0027 [GO:0042127] regulation of cell proliferation; [K05954] protein farnesyltransferase subunit beta [EC:2.5.1.58]; [2.5.1.58] Protein farnesyltransferase.; [KOG0366] Protein geranylgeranyltransferase type II, beta subunit; [PF13249] Prenyltransferase-like; [GO:0005965] protein farnesyltransferase complex; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [GO:0018343] protein farnesylation; [PTHR11774:SF6] PROTEIN FARNESYLTRANSFERASE BETA SUBUNIT (CAAX FARNESYLTRANSFERASE BETA SUBUNIT) (RAS PROTEINS PRENYLTRANSFERASE BETA) (FTASE-BETA) 59.70 0.7098 30 Mapoly0056s0071 [PTHR13507] UNCHARACTERIZED; [PF06658] Protein of unknown function (DUF1168) 59.80 0.7237 31 Mapoly0056s0054 [GO:0006506] GPI anchor biosynthetic process; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K03857] phosphatidylinositol glycan, class A [EC:2.4.1.198]; [PTHR12526] GLYCOSYLTRANSFERASE; [KOG1111] N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase; [2.4.1.198] Phosphatidylinositol N-acetylglucosaminyltransferase.; [PF08288] PIGA (GPI anchor biosynthesis) 60.53 0.7366 32 Mapoly0001s0312 [PF13837] Myb/SANT-like DNA-binding domain 61.08 0.7082 33 Mapoly0114s0034 [GO:0003723] RNA binding; [KOG1588] RNA-binding protein Sam68 and related KH domain proteins; [PF00013] KH domain; [PTHR11208] RNA-BINDING PROTEIN RELATED 63.80 0.7092 34 Mapoly0055s0119 [PF05148] Hypothetical methyltransferase; [KOG3045] Predicted RNA methylase involved in rRNA processing; [GO:0008168] methyltransferase activity; [PTHR12787:SF0] SUBFAMILY NOT NAMED; [PTHR12787] UNCHARACTERIZED 64.90 0.7222 35 Mapoly0047s0022 [PF00782] Dual specificity phosphatase, catalytic domain; [K01104] protein-tyrosine phosphatase [EC:3.1.3.48]; [GO:0006470] protein dephosphorylation; [PTHR23339] TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity; [3.1.3.48] Protein-tyrosine-phosphatase.; [PTHR23339:SF25] DUAL SPECIFICITY PROTEIN PHOSPHATASE 65.16 0.7283 36 Mapoly0075s0024 [PF06747] CHCH domain; [PTHR21107] FAMILY NOT NAMED; [KOG3477] Putative cytochrome c oxidase, subunit COX19 65.50 0.6159 37 Mapoly0041s0104 [PTHR31307] FAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain 70.36 0.7062 38 Mapoly0058s0003 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF04818] RNA polymerase II-binding domain.; [PTHR12323] SR-RELATED CTD ASSOCIATED FACTOR 6; [PF01805] Surp module 70.89 0.7231 39 Mapoly0059s0093 [PTHR10994] RETICULON; [PF03407] Nucleotide-diphospho-sugar transferase 72.25 0.6959 40 Mapoly0029s0094 [KOG0114] Predicted RNA-binding protein (RRM superfamily); [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PTHR20957] UNCHARACTERIZED 72.36 0.6691 41 Mapoly0067s0020 [PTHR23329] TUFTELIN-INTERACTING PROTEIN 11-RELATED; [KOG2185] Predicted RNA-processing protein, contains G-patch domain; [PF01585] G-patch domain; [PTHR23329:SF2] ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN PROTEIN; [GO:0003676] nucleic acid binding 72.83 0.6772 42 Mapoly0614s0001 - 73.42 0.6865 43 Mapoly0076s0021 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [KOG0342] ATP-dependent RNA helicase pitchoune; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF98] PUTATIVE ATP-DEPENDENT RNA HELICASE C22F3.08C 77.97 0.7090 44 Mapoly0071s0030 [PF03725] 3' exoribonuclease family, domain 2; [K12586] exosome complex component RRP43; [PTHR11097:SF9] EXOSOME COMPLEX EXONUCLEASE RRP43 (RIBOSOMAL RNA PROCESSING PROTEIN 43); [PTHR11097] EXOSOME COMPLEX EXONUCLEASE (RIBOSOMAL RNA PROCESSING PROTEIN); [PF01138] 3' exoribonuclease family, domain 1; [KOG1613] Exosomal 3'-5' exoribonuclease complex, subunit Rrp43 78.10 0.7322 45 Mapoly0062s0088 [GO:0008915] lipid-A-disaccharide synthase activity; [PTHR30372] LIPID-A-DISACCHARIDE SYNTHASE; [PF02684] Lipid-A-disaccharide synthetase; [GO:0009245] lipid A biosynthetic process 78.84 0.6969 46 Mapoly0008s0061 [KOG3062] RNA polymerase II elongator associated protein; [PTHR12435:SF1] KTI12; [PTHR12435] UNCHARACTERIZED; [PF08433] Chromatin associated protein KTI12 78.99 0.5984 47 Mapoly0041s0121 [PTHR13989] REPLICATION PROTEIN A-RELATED; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain 81.38 0.6831 48 Mapoly0052s0047 [PF03556] Cullin binding; [PTHR12281] RP42 RELATED 83.40 0.6881 49 Mapoly0028s0083 [3.1.2.15] Ubiquitin thiolesterase.; [KOG0944] Ubiquitin-specific protease UBP14; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0005515] protein binding; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0008270] zinc ion binding; [K11836] ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15]; [PF00627] UBA/TS-N domain; [PTHR24006] FAMILY NOT NAMED; [PF02148] Zn-finger in ubiquitin-hydrolases and other protein 83.67 0.6966 50 Mapoly0087s0007 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0738] AAA+-type ATPase 84.05 0.6576