Guide Gene

Gene ID
Mapoly0002s0307
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005524] ATP binding; [PTHR30160] TETRAACYLDISACCHARIDE 4'-KINASE-RELATED; [PF02606] Tetraacyldisaccharide-1-P 4'-kinase; [PTHR30160:SF0] TETRAACYLDISACCHARIDE 4-KINASE; [GO:0009029] tetraacyldisaccharide 4'-kinase activity; [GO:0009245] lipid A biosynthetic process

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0002s0307 [GO:0005524] ATP binding; [PTHR30160] TETRAACYLDISACCHARIDE 4'-KINASE-RELATED; [PF02606] Tetraacyldisaccharide-1-P 4'-kinase; [PTHR30160:SF0] TETRAACYLDISACCHARIDE 4-KINASE; [GO:0009029] tetraacyldisaccharide 4'-kinase activity; [GO:0009245] lipid A biosynthetic process 0.00 1.0000
1 Mapoly0002s0306 [GO:0016763] transferase activity, transferring pentosyl groups; [PF04179] Initiator tRNA phosphoribosyl transferase; [KOG2634] Initiator tRNA phosphoribosyl-transferase; [PTHR31811:SF0] SUBFAMILY NOT NAMED; [PTHR31811] FAMILY NOT NAMED1.730.8008
2 Mapoly0029s0094 [KOG0114] Predicted RNA-binding protein (RRM superfamily); [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PTHR20957] UNCHARACTERIZED4.580.7541
3 Mapoly0033s0101 [PF15011] Casein Kinase 2 substrate5.480.7697
4 Mapoly0038s0066 [KOG4589] Cell division protein FtsJ; [GO:0008168] methyltransferase activity; [PTHR10920] RIBOSOMAL RNA METHYLTRANSFERASE; [GO:0032259] methylation; [PF01728] FtsJ-like methyltransferase; [GO:0001510] RNA methylation5.660.7843
5 Mapoly0068s0046 [KOG3416] Predicted nucleic acid binding protein; [PTHR13356] OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED6.000.7244
6 Mapoly0115s0037 [KOG4058] Uncharacterized conserved protein; [PF13659] Methyltransferase domain; [PTHR13610] UNCHARACTERIZED; [PTHR13610:SF2] SUBFAMILY NOT NAMED7.480.7673
7 Mapoly0041s0121 [PTHR13989] REPLICATION PROTEIN A-RELATED; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain7.750.7591
8 Mapoly0153s0022 [PTHR23109:SF6] UNCHARACTERIZED; [PF10294] Putative methyltransferase; [PTHR23109] UNCHARACTERIZED7.750.6771
9 Mapoly0044s0100 [K03847] alpha-1,6-mannosyltransferase [EC:2.4.1.130]; [PTHR22760:SF1] GLYCOSYLTRANSFERASE; [KOG2516] Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family); [PF03901] Alg9-like mannosyltransferase family; [PTHR22760] GLYCOSYLTRANSFERASE; [2.4.1.130] Transferred entry: 2.4.1.258, 2.4.1.259, 2.4.1.260 and 2.4.1.261.; [GO:0016757] transferase activity, transferring glycosyl groups10.490.7636
10 Mapoly0093s0081 [PF10218] Uncharacterized conserved protein (DUF2054); [PF15024] Glycosyltransferase family 18; [PTHR13481] UNCHARACTERIZED11.310.7448
11 Mapoly0009s0190 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity11.620.7424
12 Mapoly0061s0092 [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING14.970.7193
13 Mapoly0029s0083 [PTHR13063] ENOS INTERACTING PROTEIN; [K13125] nitric oxide synthase-interacting protein; [PF04641] Rtf2 RING-finger; [KOG3039] Uncharacterized conserved protein16.520.7106
14 Mapoly0054s0077 -22.000.6892
15 Mapoly0039s0106 -22.650.6779
16 Mapoly0054s0046 -25.500.7405
17 Mapoly0081s0037 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [PTHR21071:SF3] gb def: UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) (UDP-N- acetylmuram; [GO:0050660] flavin adenine dinucleotide binding; [PF02873] UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR21071] UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE; [PF01565] FAD binding domain28.140.6627
18 Mapoly0029s0123 [PTHR14269] CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED; [KOG1618] Predicted phosphatase; [PTHR14269:SF4] UNCHARACTERIZED; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like29.090.6866
19 Mapoly0146s0040 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase30.030.7280
20 Mapoly0028s0096 -30.200.7108
21 Mapoly0168s0007 [PTHR10252:SF25] SUBFAMILY NOT NAMED; [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [GO:0005622] intracellular; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED30.820.7084
22 Mapoly0087s0007 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0738] AAA+-type ATPase32.330.6788
23 Mapoly0042s0051 [PF06694] Plant nuclear matrix protein 1 (NMP1); [PTHR14352] FAMILY NOT NAMED33.050.7081
24 Mapoly0001s0312 [PF13837] Myb/SANT-like DNA-binding domain33.090.7174
25 Mapoly0138s0039 [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [KOG4332] Predicted sugar transporter; [PF05631] Protein of unknown function (DUF791); [PTHR24003:SF368] SUBFAMILY NOT NAMED33.230.6364
26 Mapoly0113s0054 [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [3.5.1.-] In linear amides.; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [K11415] NAD-dependent deacetylase sirtuin 5 [EC:3.5.1.-]; [KOG2683] Sirtuin 4 and related class II sirtuins (SIR2 family)33.540.6883
27 Mapoly0046s0029 -35.890.7089
28 Mapoly0086s0048 [PTHR22936:SF17] RHOMBOID 1; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis39.800.7091
29 Mapoly0012s0176 [PF04934] MED6 mediator sub complex component; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3169] RNA polymerase II transcriptional regulation mediator; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PTHR13104] MED-6-RELATED40.400.6565
30 Mapoly0005s0270 [PTHR10588:SF32] LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48; [PTHR10588] FAMILY NOT NAMED; [KOG1644] U2-associated snRNP A' protein; [PF14580] Leucine-rich repeat41.350.7111
31 Mapoly0019s0153 [GO:0005524] ATP binding; [GO:0005674] transcription factor TFIIF complex; [PTHR10445:SF0] GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2; [KOG2905] Transcription initiation factor IIF, small subunit (RAP30); [3.6.4.12] DNA helicase.; [K03139] transcription initiation factor TFIIF subunit beta [EC:3.6.4.12]; [PF02270] Transcription initiation factor IIF, beta subunit; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PTHR10445] GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 241.810.6879
32 Mapoly0071s0019 [PTHR12176] UNCHARACTERIZED; [PF13847] Methyltransferase domain; [KOG1271] Methyltransferases42.200.7223
33 Mapoly0209s0005 [PTHR12689] A1 CISTRON SPLICING FACTOR AAR2-RELATED; [PF05282] AAR2 protein; [K13205] A1 cistron-splicing factor AAR2; [KOG3937] mRNA splicing factor44.880.6523
34 Mapoly0003s0233 -45.900.6917
35 Mapoly0166s0013 [PF09415] CENP-S associating Centromere protein X; [GO:0051382] kinetochore assembly; [GO:0006281] DNA repair46.210.6763
36 Mapoly0048s0062 [PF15159] Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y48.150.6440
37 Mapoly0140s0034 -48.440.7140
38 Mapoly0115s0038 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [PTHR14614:SF3] UNCHARACTERIZED; [KOG2793] Putative N2,N2-dimethylguanosine tRNA methyltransferase50.820.6931
39 Mapoly0033s0102 -51.330.7047
40 Mapoly0214s0005 [GO:0003951] NAD+ kinase activity; [GO:0006741] NADP biosynthetic process; [GO:0008152] metabolic process; [PTHR20275] FAMILY NOT NAMED; [PF01513] ATP-NAD kinase51.380.7106
41 Mapoly0009s0024 [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)52.540.6046
42 Mapoly0007s0061 [KOG1434] Meiotic recombination protein Dmc1; [PTHR22942] RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER; [K10869] RAD51-like protein 1; [PTHR22942:SF15] DNA REPAIR PROTEIN RAD51 HOMOLOG 2, R51H2; [PF08423] Rad5152.650.6673
43 Mapoly0016s0023 [GO:0008152] metabolic process; [PTHR11825] SUBGROUP IIII AMINOTRANSFERASE; [PF01063] Aminotransferase class IV; [GO:0003824] catalytic activity52.760.6041
44 Mapoly0001s0063 [PTHR11635] CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN; [PF00027] Cyclic nucleotide-binding domain53.180.7058
45 Mapoly0106s0015 [PTHR12561] LIPOATE-PROTEIN LIGASE; [GO:0006464] cellular protein modification process; [PF03099] Biotin/lipoate A/B protein ligase family54.960.6792
46 Mapoly0173s0027 -55.570.7166
47 Mapoly0014s0124 [PTHR12849] RNA LARIAT DEBRANCHING ENZYME; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [GO:0006397] mRNA processing; [GO:0016788] hydrolase activity, acting on ester bonds; [PF05011] Lariat debranching enzyme, C-terminal domain; [KOG2863] RNA lariat debranching enzyme56.070.7086
48 Mapoly0005s0020 [PF00929] Exonuclease; [PTHR23044] 3'-5' EXONUCLEASE ERI1-RELATED; [KOG0542] Predicted exonuclease56.390.6105
49 Mapoly0051s0107 [PF01926] 50S ribosome-binding GTPase; [GO:0005525] GTP binding57.410.6543
50 Mapoly0011s0009 [GO:0016758] transferase activity, transferring hexosyl groups; [KOG2576] Glucosyltransferase - Alg8p; [K03849] alpha-1,3-glucosyltransferase [EC:2.4.1.-]; [PTHR12413] DOLICHYL GLYCOSYLTRANSFERASE; [PF03155] ALG6, ALG8 glycosyltransferase family; [GO:0005789] endoplasmic reticulum membrane; [2.4.1.-] Hexosyltransferases.58.890.6808
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