Guide Gene
- Gene ID
- Mapoly0012s0176
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF04934] MED6 mediator sub complex component; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3169] RNA polymerase II transcriptional regulation mediator; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PTHR13104] MED-6-RELATED
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0012s0176 [PF04934] MED6 mediator sub complex component; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3169] RNA polymerase II transcriptional regulation mediator; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PTHR13104] MED-6-RELATED 0.00 1.0000 1 Mapoly0019s0003 [PTHR11079] CYTOSINE DEAMINASE; [GO:0016787] hydrolase activity; [PF00383] Cytidine and deoxycytidylate deaminase zinc-binding region; [GO:0008270] zinc ion binding; [PTHR11079:SF3] CYTIDINE AND DEOXYCYTIDYLATE DEAMINASE ZINC-BINDING REGION 2.45 0.7448 2 Mapoly0025s0114 - 4.69 0.6475 3 Mapoly0138s0039 [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [KOG4332] Predicted sugar transporter; [PF05631] Protein of unknown function (DUF791); [PTHR24003:SF368] SUBFAMILY NOT NAMED 5.10 0.6637 4 Mapoly0049s0059 [KOG0265] U5 snRNP-specific protein-like factor and related proteins; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [K12857] Prp8 binding protein; [PF00400] WD domain, G-beta repeat 9.00 0.7191 5 Mapoly0029s0083 [PTHR13063] ENOS INTERACTING PROTEIN; [K13125] nitric oxide synthase-interacting protein; [PF04641] Rtf2 RING-finger; [KOG3039] Uncharacterized conserved protein 9.17 0.6951 6 Mapoly0006s0052 [GO:0003723] RNA binding; [GO:0004523] ribonuclease H activity; [PF01351] Ribonuclease HII; [PTHR10954] RIBONUCLEASE H2 SUBUNIT A; [K10743] ribonuclease H2 subunit A [EC:3.1.26.4]; [3.1.26.4] Ribonuclease H.; [PTHR10954:SF7] RIBONUCLEASE H2 SUBUNIT A; [KOG2299] Ribonuclease HI 9.70 0.7244 7 Mapoly0007s0004 [PTHR31696] FAMILY NOT NAMED; [PF04759] Protein of unknown function, DUF617 10.15 0.5827 8 Mapoly0041s0133 [PF01426] BAH domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR 11.18 0.6936 9 Mapoly0052s0057 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [PTHR22807:SF16] SUN FAMILY PROTEIN-RELATED; [PF01189] NOL1/NOP2/sun family; [KOG2198] tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily 22.85 0.6702 10 Mapoly0037s0121 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) 25.69 0.6877 11 Mapoly0029s0124 - 26.94 0.6668 12 Mapoly0009s0045 [PTHR10741] TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X; [GO:0043565] sequence-specific DNA binding; [KOG3067] Translin family protein; [PF01997] Translin family; [PTHR10741:SF2] TRANSLIN 29.12 0.6800 13 Mapoly0042s0029 [GO:0016021] integral to membrane; [GO:0008963] phospho-N-acetylmuramoyl-pentapeptide-transferase activity; [PTHR22926] PHOSPHO-N-ACETYLMURAMOYL-PENTAPEPTIDE-TRANSFERASE 29.33 0.5905 14 Mapoly0081s0037 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [PTHR21071:SF3] gb def: UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) (UDP-N- acetylmuram; [GO:0050660] flavin adenine dinucleotide binding; [PF02873] UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR21071] UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE; [PF01565] FAD binding domain 29.95 0.6291 15 Mapoly0069s0083 [K11662] actin-related protein 6; [PF00022] Actin; [PTHR11937:SF21] ACTIN-LIKE PROTEIN; [PTHR11937] ACTIN; [KOG0680] Actin-related protein - Arp6p 30.72 0.6598 16 Mapoly0041s0121 [PTHR13989] REPLICATION PROTEIN A-RELATED; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain 31.78 0.6676 17 Mapoly0069s0072 [GO:0005524] ATP binding; [GO:0008026] ATP-dependent helicase activity; [3.6.4.13] RNA helicase.; [PF13307] Helicase C-terminal domain; [PTHR11472] DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; [K11273] chromosome transmission fidelity protein 1 [EC:3.6.4.13] 35.00 0.6802 18 Mapoly0029s0084 - 37.95 0.6455 19 Mapoly0068s0046 [KOG3416] Predicted nucleic acid binding protein; [PTHR13356] OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED 39.42 0.6281 20 Mapoly0002s0307 [GO:0005524] ATP binding; [PTHR30160] TETRAACYLDISACCHARIDE 4'-KINASE-RELATED; [PF02606] Tetraacyldisaccharide-1-P 4'-kinase; [PTHR30160:SF0] TETRAACYLDISACCHARIDE 4-KINASE; [GO:0009029] tetraacyldisaccharide 4'-kinase activity; [GO:0009245] lipid A biosynthetic process 40.40 0.6565 21 Mapoly0032s0081 [GO:0008641] small protein activating enzyme activity; [GO:0045116] protein neddylation; [GO:0005524] ATP binding; [PTHR10953:SF6] UBIQUITIN-ACTIVATING ENZYME E1C (NEDD8-ACTIVATING ENZYME E1 CATALYTIC SUBUNIT); [KOG2015] NEDD8-activating complex, catalytic component UBA3; [PF08825] E2 binding domain; [GO:0016881] acid-amino acid ligase activity; [PF00899] ThiF family; [PF02134] Repeat in ubiquitin-activating (UBA) protein; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [PF10585] Ubiquitin-activating enzyme active site; [GO:0006464] cellular protein modification process; [K10686] ubiquitin-activating enzyme E1 C [EC:6.3.2.19] 40.40 0.6649 22 Mapoly0157s0022 [PTHR13889:SF11] SUBFAMILY NOT NAMED; [K10599] pre-mRNA-processing factor 19 [EC:6.3.2.19]; [PF08606] Prp19/Pso4-like; [GO:0005515] protein binding; [KOG0289] mRNA splicing factor; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR13889] PRE-MRNA SPLICING FACTOR PRP19-RELATED; [PF00400] WD domain, G-beta repeat 40.93 0.6443 23 Mapoly0061s0117 - 43.47 0.6436 24 Mapoly0106s0044 [PF03980] Nnf1 50.30 0.6462 25 Mapoly0033s0101 [PF15011] Casein Kinase 2 substrate 53.70 0.6411 26 Mapoly0075s0082 - 54.50 0.5889 27 Mapoly0052s0123 [PTHR12616] VACUOLAR PROTEIN SORTING VPS41 56.67 0.6527 28 Mapoly0001s0170 - 56.99 0.6636 29 Mapoly0016s0006 [PTHR19923] WD40 REPEAT PROTEINPRL1/PRL2-RELATED; [PTHR19923:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [K12862] pleiotropic regulator 1; [KOG0285] Pleiotropic regulator 1; [PF00400] WD domain, G-beta repeat 60.00 0.6619 30 Mapoly0121s0036 [GO:0002161] aminoacyl-tRNA editing activity; [PF04073] Aminoacyl-tRNA editing domain; [PTHR30411] UNCHARACTERIZED 60.62 0.6227 31 Mapoly0075s0044 - 61.77 0.6208 32 Mapoly0100s0025 [K13175] THO complex subunit 6; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat; [KOG0649] WD40 repeat protein 62.35 0.6317 33 Mapoly0009s0190 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity 68.98 0.6440 34 Mapoly0089s0012 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H4 71.87 0.6481 35 Mapoly0091s0089 - 73.02 0.6123 36 Mapoly0027s0013 [KOG4487] Uncharacterized conserved protein; [PF09696] Ctf8; [K11270] chromosome transmission fidelity protein 8 74.09 0.6543 37 Mapoly0053s0055 [KOG0871] Class 2 transcription repressor NC2, beta subunit (Dr1); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular 76.50 0.6262 38 Mapoly0079s0005 [GO:0008080] N-acetyltransferase activity; [GO:0016568] chromatin modification; [PF00583] Acetyltransferase (GNAT) family; [GO:0005634] nucleus; [GO:0004402] histone acetyltransferase activity; [GO:0016573] histone acetylation; [KOG2696] Histone acetyltransferase type b catalytic subunit; [GO:0006348] chromatin silencing at telomere; [2.3.1.48] Histone acetyltransferase.; [PTHR12046] HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT; [K11303] histone acetyltransferase 1 [EC:2.3.1.48]; [PF10394] Histone acetyl transferase HAT1 N-terminus 83.31 0.6501 39 Mapoly0022s0148 [PTHR23245] UNCHARACTERIZED; [PTHR23245:SF25] METHIONINE 10+ HOMOLOG; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity; [KOG2078] tRNA modification enzyme; [K07055] TatD-related deoxyribonuclease 85.32 0.5658 40 Mapoly0004s0134 - 87.12 0.5794 41 Mapoly0001s0557 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG2553] Pseudouridylate synthase; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase. 87.68 0.6373 42 Mapoly0229s0008 [PF13837] Myb/SANT-like DNA-binding domain 88.45 0.6229 43 Mapoly0020s0167 [PF03725] 3' exoribonuclease family, domain 2; [KOG1068] Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases; [K11600] exosome complex component RRP41; [PTHR11953] RIBONUCLEASE PH RELATED; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11953:SF0] SUBFAMILY NOT NAMED 91.43 0.6196 44 Mapoly0016s0055 - 91.65 0.6001 45 Mapoly0008s0133 [PF13868] Tumour suppressor, Mitostatin 92.09 0.6350 46 Mapoly0059s0065 [GO:0008270] zinc ion binding; [PF07496] CW-type Zinc Finger 92.38 0.6326 47 Mapoly0008s0146 - 94.02 0.6216 48 Mapoly0001s0063 [PTHR11635] CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN; [PF00027] Cyclic nucleotide-binding domain 96.28 0.6381 49 Mapoly0080s0021 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [K13117] ATP-dependent RNA helicase DDX35 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold 96.39 0.6162 50 Mapoly0117s0010 [PTHR11024] PROTEIN TRANSPORT PROTEIN SEC13-RELATED; [GO:0005515] protein binding; [KOG2445] Nuclear pore complex component (sc Seh1); [PF00400] WD domain, G-beta repeat 97.95 0.5979