Guide Gene

Gene ID
Mapoly0117s0010
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR11024] PROTEIN TRANSPORT PROTEIN SEC13-RELATED; [GO:0005515] protein binding; [KOG2445] Nuclear pore complex component (sc Seh1); [PF00400] WD domain, G-beta repeat

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0117s0010 [PTHR11024] PROTEIN TRANSPORT PROTEIN SEC13-RELATED; [GO:0005515] protein binding; [KOG2445] Nuclear pore complex component (sc Seh1); [PF00400] WD domain, G-beta repeat 0.00 1.0000
1 Mapoly0189s0018 -3.160.7744
2 Mapoly0009s0045 [PTHR10741] TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X; [GO:0043565] sequence-specific DNA binding; [KOG3067] Translin family protein; [PF01997] Translin family; [PTHR10741:SF2] TRANSLIN3.320.7840
3 Mapoly0080s0021 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [K13117] ATP-dependent RNA helicase DDX35 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold4.240.7582
4 Mapoly0006s0306 [GO:0005524] ATP binding; [PTHR22942] RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER; [GO:0003697] single-stranded DNA binding; [GO:0006281] DNA repair; [GO:0009432] SOS response; [PF00154] recA bacterial DNA recombination protein; [K03553] recombination protein RecA; [KOG1433] DNA repair protein RAD51/RHP556.480.7339
5 Mapoly0097s0033 [PTHR10870] CELL CYCLE CHECKPOINT PROTEIN RAD1; [KOG3194] Checkpoint 9-1-1 complex, RAD1 component; [PF02144] Repair protein Rad1/Rec1/Rad17; [GO:0005634] nucleus; [K02830] cell cycle checkpoint protein [EC:3.1.11.2]; [GO:0006281] DNA repair; [3.1.11.2] Exodeoxyribonuclease III.6.930.7487
6 Mapoly0147s0029 [PTHR21596] RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family8.000.6857
7 Mapoly0033s0116 [PTHR13812] ORNITHINE CYCLODEAMINASE-RELATED; [KOG3007] Mu-crystallin; [PTHR13812:SF2] ORNITHINE CYCLODEAMINASE; [PF02423] Ornithine cyclodeaminase/mu-crystallin family9.330.6152
8 Mapoly0091s0089 -10.390.7112
9 Mapoly0032s0121 [PTHR22976] BIOTIN SYNTHASE; [PTHR22976:SF4] SUBFAMILY NOT NAMED; [PF04055] Radical SAM superfamily; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding14.830.7146
10 Mapoly0082s0056 [PTHR13211] UNCHARACTERIZED; [GO:0005515] protein binding; [KOG2919] Guanine nucleotide-binding protein; [PF00400] WD domain, G-beta repeat15.650.7319
11 Mapoly0024s0018 [PTHR23147] SERINE/ARGININE RICH SPLICING FACTOR; [KOG4207] Predicted splicing factor, SR protein superfamily; [K12891] splicing factor, arginine/serine-rich 2; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)15.970.7390
12 Mapoly0118s0024 [PTHR22840] FAMILY NOT NAMED; [GO:0005515] protein binding; [K14406] cleavage stimulation factor subunit 1; [KOG0640] mRNA cleavage stimulating factor complex; subunit 1; [PF00400] WD domain, G-beta repeat16.520.6993
13 Mapoly0099s0014 [PF07714] Protein tyrosine kinase; [KOG0192] Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs; [PTHR23257] SERINE-THREONINE PROTEIN KINASE; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation21.350.6719
14 Mapoly0010s0011 [GO:0005737] cytoplasm; [GO:0006974] response to DNA damage stimulus; [GO:0006281] DNA repair; [PF03652] Uncharacterised protein family (UPF0081); [GO:0016788] hydrolase activity, acting on ester bonds; [3.1.-.-] Acting on ester bonds.; [GO:0006310] DNA recombination; [K07447] putative holliday junction resolvase [EC:3.1.-.-]21.790.6819
15 Mapoly0075s0044 -21.980.6746
16 Mapoly0010s0051 [PF12689] Acid Phosphatase; [GO:0016791] phosphatase activity; [PTHR17901] FAMILY NOT NAMED; [KOG4549] Magnesium-dependent phosphatase22.580.6658
17 Mapoly0004s0118 [KOG0121] Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily); [PTHR15241] TRANSFORMER-2-RELATED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)27.350.6828
18 Mapoly0187s0003 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [K06062] histone acetyltransferase [EC:2.3.1.48]; [GO:0005515] protein binding; [PF00439] Bromodomain; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [2.3.1.48] Histone acetyltransferase.27.750.7136
19 Mapoly0049s0059 [KOG0265] U5 snRNP-specific protein-like factor and related proteins; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [K12857] Prp8 binding protein; [PF00400] WD domain, G-beta repeat29.750.6861
20 Mapoly0016s0006 [PTHR19923] WD40 REPEAT PROTEINPRL1/PRL2-RELATED; [PTHR19923:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [K12862] pleiotropic regulator 1; [KOG0285] Pleiotropic regulator 1; [PF00400] WD domain, G-beta repeat30.330.7186
21 Mapoly0044s0113 [PTHR14255] ATP-DEPENDENT PROTEASE (CEREBLON); [PTHR14255:SF3] gb def: Hypothetical protein M18.6; [GO:0016021] integral to membrane; [PF01925] Sulfite exporter TauE/SafE30.740.6631
22 Mapoly0014s0064 [PTHR10552] U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A; [K11092] U2 small nuclear ribonucleoprotein A'; [KOG1644] U2-associated snRNP A' protein; [PF14580] Leucine-rich repeat32.590.7176
23 Mapoly0004s0132 -36.990.6820
24 Mapoly0090s0026 [PTHR12900] MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1; [KOG3999] Checkpoint 9-1-1 complex, HUS1 component; [GO:0006281] DNA repair; [GO:0000077] DNA damage checkpoint; [PF04005] Hus1-like protein; [GO:0030896] checkpoint clamp complex; [K10903] HUS1 checkpoint protein37.510.5583
25 Mapoly0020s0167 [PF03725] 3' exoribonuclease family, domain 2; [KOG1068] Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases; [K11600] exosome complex component RRP41; [PTHR11953] RIBONUCLEASE PH RELATED; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11953:SF0] SUBFAMILY NOT NAMED38.410.6708
26 Mapoly0050s0095 [KOG1069] Exosomal 3'-5' exoribonuclease complex, subunit Rrp46; [PTHR11953:SF1] RIBONUCLEASE PH-RELATED; [K12590] exosome complex component RRP46; [PTHR11953] RIBONUCLEASE PH RELATED; [PF01138] 3' exoribonuclease family, domain 138.960.6644
27 Mapoly0033s0011 [GO:0003723] RNA binding; [PTHR21321] PNAS-3 RELATED; [KOG1004] Exosomal 3'-5' exoribonuclease complex subunit Rrp40; [GO:0000178] exosome (RNase complex)40.250.6771
28 Mapoly0009s0203 -40.300.6864
29 Mapoly0014s0217 [GO:0005515] protein binding; [KOG0322] G-protein beta subunit-like protein GNB1L, contains WD repeats; [PTHR19854:SF1] GB DEF: GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN 1 G PROTEIN BETA-S; [PTHR19854] TRANSDUCIN BETA-LIKE 3; [PF00400] WD domain, G-beta repeat40.470.6754
30 Mapoly0019s0131 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others40.840.5892
31 Mapoly0059s0052 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding42.430.6481
32 Mapoly0052s0068 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE43.160.6689
33 Mapoly0053s0014 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR15316] SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED; [PF01805] Surp module43.310.6677
34 Mapoly0459s0001 -43.450.6373
35 Mapoly0001s0197 [K10733] GINS complex subunit 2; [GO:0006260] DNA replication; [PF05916] GINS complex protein; [GO:0005634] nucleus; [KOG4071] Uncharacterized conserved protein; [PTHR12772] DNA REPLICATION COMPLEX GINS PROTEIN PSF246.450.6696
36 Mapoly0016s0052 [K10752] histone-binding protein RBBP4; [GO:0005515] protein binding; [KOG0264] Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1; [PTHR22850] WD40 REPEAT FAMILY; [PF12265] Histone-binding protein RBBP4 or subunit C of CAF1 complex; [PF00400] WD domain, G-beta repeat46.910.6330
37 Mapoly0051s0089 [GO:0003677] DNA binding; [K03013] DNA-directed RNA polymerases I, II, and III subunit RPABC1; [PF03871] RNA polymerase Rpb5, N-terminal domain; [PTHR10535] FAMILY NOT NAMED; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF01191] RNA polymerase Rpb5, C-terminal domain; [GO:0003899] DNA-directed RNA polymerase activity; [KOG3218] RNA polymerase, 25-kDa subunit (common to polymerases I, II and III)48.170.6665
38 Mapoly0007s0061 [KOG1434] Meiotic recombination protein Dmc1; [PTHR22942] RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER; [K10869] RAD51-like protein 1; [PTHR22942:SF15] DNA REPAIR PROTEIN RAD51 HOMOLOG 2, R51H2; [PF08423] Rad5148.480.6509
39 Mapoly0024s0141 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain48.760.6572
40 Mapoly0052s0057 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [PTHR22807:SF16] SUN FAMILY PROTEIN-RELATED; [PF01189] NOL1/NOP2/sun family; [KOG2198] tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily49.130.6635
41 Mapoly0080s0014 [PTHR12786:SF1] UNCHARACTERIZED; [PTHR12786] SPLICING FACTOR SF3A-RELATED; [PF13019] Telomere stability and silencing51.210.6342
42 Mapoly0032s0039 [PF01963] TraB family; [PTHR21530:SF0] SUBFAMILY NOT NAMED; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN51.960.6278
43 Mapoly0032s0124 [PF04864] Allinase; [GO:0016846] carbon-sulfur lyase activity; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED; [PF04863] Alliinase EGF-like domain54.090.5909
44 Mapoly0036s0095 [PTHR10598] SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2; [GO:0005515] protein binding; [PF00622] SPRY domain55.430.6499
45 Mapoly0001s0495 [PF14368] Probable lipid transfer56.320.6365
46 Mapoly0002s0284 [KOG0814] Glyoxylase; [PTHR11935] BETA LACTAMASE DOMAIN; [PF00753] Metallo-beta-lactamase superfamily; [PTHR11935:SF8] BETA LACTAMASE DOMAIN56.870.5278
47 Mapoly0111s0002 [K12848] U4/U6.U5 tri-snRNP component SNU23; [PF12874] Zinc-finger of C2H2 type; [PTHR23067] DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN; [KOG4727] U1-like Zn-finger protein65.820.6275
48 Mapoly0001s0422 [GO:0048046] apoplast; [GO:0016762] xyloglucan:xyloglucosyl transferase activity; [GO:0006073] cellular glucan metabolic process; [PTHR31062] FAMILY NOT NAMED; [PF06955] Xyloglucan endo-transglycosylase (XET) C-terminus; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00722] Glycosyl hydrolases family 16; [2.4.1.207] Xyloglucan:xyloglucosyl transferase.; [K08235] xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]; [GO:0005618] cell wall68.280.6566
49 Mapoly0096s0048 [GO:0030915] Smc5-Smc6 complex; [PTHR21330] UNCHARACTERIZED; [GO:0019789] SUMO ligase activity; [PF11789] Zinc-finger of the MIZ type in Nse subunit; [GO:0000724] double-strand break repair via homologous recombination70.010.6395
50 Mapoly0039s0092 [GO:0003677] DNA binding; [KOG2732] DNA polymerase delta, regulatory subunit 55; [GO:0006260] DNA replication; [PTHR10416] DNA POLYMERASE DELTA SUBUNIT 2; [PF04042] DNA polymerase alpha/epsilon subunit B; [GO:0003887] DNA-directed DNA polymerase activity; [PTHR10416:SF0] DNA POLYMERASE DELTA SUBUNIT 2; [K02328] DNA polymerase delta subunit 271.750.5456
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