Guide Gene

Gene ID
Mapoly0175s0005
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0008152] metabolic process; [KOG4192] Uncharacterized conserved protein; [GO:0016846] carbon-sulfur lyase activity; [PF04828] Glutathione-dependent formaldehyde-activating enzyme

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0175s0005 [GO:0008152] metabolic process; [KOG4192] Uncharacterized conserved protein; [GO:0016846] carbon-sulfur lyase activity; [PF04828] Glutathione-dependent formaldehyde-activating enzyme 0.00 1.0000
1 Mapoly0088s0021 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006289] nucleotide-excision repair; [K10845] TFIIH basal transcription factor complex TTD-A subunit; [PF06331] Transcription factor TFIIH complex subunit Tfb5; [KOG3451] Uncharacterized conserved protein; [GO:0000439] core TFIIH complex6.780.7044
2 Mapoly0050s0102 [KOG3297] DNA-directed RNA polymerase subunit E'; [K03022] DNA-directed RNA polymerase III subunit RPC8; [PF03876] SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR12709:SF1] DNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDE RPB7; [2.7.7.6] DNA-directed RNA polymerase.; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III; [PF08292] RNA polymerase III subunit Rpc257.000.6774
3 Mapoly0103s0046 [GO:0005685] U1 snRNP; [PF06220] U1 zinc finger; [GO:0008270] zinc ion binding; [K11095] U1 small nuclear ribonucleoprotein C; [GO:0000398] mRNA splicing, via spliceosome; [KOG3454] U1 snRNP-specific protein C; [GO:0000387] spliceosomal snRNP assembly; [PTHR31148] FAMILY NOT NAMED7.550.5845
4 Mapoly0066s0018 [GO:0055114] oxidation-reduction process; [PF02195] ParB-like nuclease domain; [KOG3388] Predicted transcription regulator/nuclease, contains ParB domain; [PTHR21348] UNCHARACTERIZED; [GO:0032542] sulfiredoxin activity9.750.6815
5 Mapoly0048s0106 -10.490.7072
6 Mapoly0103s0044 [PF09296] NADH pyrophosphatase-like rudimentary NUDIX domain; [PF09297] NADH pyrophosphatase zinc ribbon domain; [GO:0016787] hydrolase activity; [K03426] NAD+ diphosphatase [EC:3.6.1.22]; [3.6.1.22] NAD(+) diphosphatase.; [GO:0046872] metal ion binding; [PTHR22769] MUTT/NUDIX HYDROLASE; [PF00293] NUDIX domain11.000.6469
7 Mapoly0004s0154 [KOG1344] Predicted histone deacetylase; [PF00850] Histone deacetylase domain; [PTHR10625] HISTONE DEACETYLASE12.330.5997
8 Mapoly0060s0011 [GO:0034314] Arp2/3 complex-mediated actin nucleation; [KOG1876] Actin-related protein Arp2/3 complex, subunit ARPC4; [GO:0030041] actin filament polymerization; [GO:0005856] cytoskeleton; [GO:0005885] Arp2/3 protein complex; [PTHR22629] ARP2/3 COMPLEX 20 KD SUBUNIT; [PF05856] ARP2/3 complex 20 kDa subunit (ARPC4); [K05755] actin related protein 2/3 complex, subunit 412.850.6364
9 Mapoly0046s0110 [K00540] formate acetyltransferase activating enzyme [EC:1.97.1.4]; [1.-.-.-] Oxidoreductases.16.430.6634
10 Mapoly0001s0091 [PF11595] Protein of unknown function (DUF3245)17.150.6287
11 Mapoly0052s0030 [PF15243] Anaphase-promoting complex subunit 1517.320.6303
12 Mapoly0028s0137 [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PF13640] 2OG-Fe(II) oxygenase superfamily; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT18.490.6343
13 Mapoly0009s0146 -18.550.6700
14 Mapoly0006s0265 -18.650.6128
15 Mapoly0033s0042 [PTHR13281:SF0] SUBFAMILY NOT NAMED; [KOG4478] Uncharacterized membrane protein; [PTHR13281] UNCHARACTERIZED; [PF06979] Protein of unknown function (DUF1301)23.320.6096
16 Mapoly0092s0011 [PF06093] Spt4/RpoE2 zinc finger; [KOG3490] Transcription elongation factor SPT4; [PTHR12882:SF0] SUBFAMILY NOT NAMED; [PTHR12882] SUPPRESSOR OF TY 428.460.6802
17 Mapoly0087s0012 [PF06508] Queuosine biosynthesis protein QueC31.460.5936
18 Mapoly0042s0050 [PF05486] Signal recognition particle 9 kDa protein (SRP9); [GO:0048500] signal recognition particle; [GO:0045900] negative regulation of translational elongation; [GO:0008312] 7S RNA binding; [K03109] signal recognition particle subunit SRP9; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR12834] SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN; [KOG3465] Signal recognition particle, subunit Srp933.620.6556
19 Mapoly0007s0025 -33.670.5285
20 Mapoly0033s0120 [PF00887] Acyl CoA binding protein; [GO:0000062] fatty-acyl-CoA binding; [PTHR23310] ACYL-COA-BINDING PROTEIN, ACBP33.670.6882
21 Mapoly0004s0023 -39.570.5653
22 Mapoly0015s0101 [PTHR31134] FAMILY NOT NAMED40.100.6865
23 Mapoly0006s0187 [PF05603] Protein of unknown function (DUF775); [PTHR12925:SF0] SUBFAMILY NOT NAMED; [KOG4067] Uncharacterized conserved protein; [PTHR12925] UNCHARACTERIZED44.990.6278
24 Mapoly0045s0083 [PTHR11527] SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY; [PF00011] Hsp20/alpha crystallin family47.050.5677
25 Mapoly0068s0081 [KOG1692] Putative cargo transport protein EMP24 (p24 protein family); [GO:0016021] integral to membrane; [GO:0006810] transport; [PF01105] emp24/gp25L/p24 family/GOLD; [PTHR22811] TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN48.220.6238
26 Mapoly0033s0085 [KOG2944] Glyoxalase; [K01759] lactoylglutathione lyase [EC:4.4.1.5]; [PTHR10374:SF2] GLYOXALASE DOMAIN-CONTAINING PROTEIN 4; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [4.4.1.5] Lactoylglutathione lyase.; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily52.080.6465
27 Mapoly0150s0017 -54.990.5553
28 Mapoly0011s0115 -55.100.5088
29 Mapoly0037s0049 [K06889] hemoglobin; [PF12695] Alpha/beta hydrolase family; [KOG4667] Predicted esterase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN60.660.5689
30 Mapoly0004s0229 -63.690.6267
31 Mapoly0033s0133 [PTHR21192] NUCLEAR PROTEIN E3-3; [K09008] hypothetical protein; [PF04430] Protein of unknown function (DUF498/DUF598)63.890.6432
32 Mapoly0038s0105 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger)64.810.5911
33 Mapoly0092s0018 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis69.800.5331
34 Mapoly0015s0116 [PTHR15858] UNCHARACTERIZED; [PTHR15858:SF0] SUBFAMILY NOT NAMED; [PF08571] Yos1-like; [KOG4779] Predicted membrane protein70.750.5790
35 Mapoly0015s0105 -71.020.6221
36 Mapoly0005s0148 [PTHR21250:SF0] SUBFAMILY NOT NAMED; [KOG4032] Uncharacterized conserved protein; [PTHR21250] UNCHARACTERIZED; [PF10273] Pre-rRNA-processing protein TSR273.300.5241
37 Mapoly0128s0022 -74.030.5954
38 Mapoly0031s0143 [GO:0016857] racemase and epimerase activity, acting on carbohydrates and derivatives; [GO:0005737] cytoplasm; [PF05336] Domain of unknown function (DUF718); [GO:0019299] rhamnose metabolic process75.110.5822
39 Mapoly0019s0017 [PF01809] Haemolytic domain75.910.5468
40 Mapoly0102s0010 [PF10235] Microtubule-associated protein CRIPT; [KOG3476] Microtubule-associated protein CRIPT; [PTHR11800] DNA-DIRECTED RNA POLYMERASE76.750.5944
41 Mapoly0073s0081 [K11876] proteasome assembly chaperone 2; [KOG3112] Uncharacterized conserved protein; [PF09754] PAC2 family; [PTHR12970] TUMOR NECROSIS FACTOR SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 (CLAST3)77.030.6345
42 Mapoly0121s0046 -77.460.5926
43 Mapoly0161s0023 [PTHR16119] FAMILY NOT NAMED; [PF07857] CEO family (DUF1632)78.460.5854
44 Mapoly0118s0028 -78.690.4846
45 Mapoly0173s0018 [KOG2351] RNA polymerase II, fourth largest subunit; [PTHR21297] DNA-DIRECTED RNA POLYMERASE II; [PF03874] RNA polymerase Rpb4; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [K03012] DNA-directed RNA polymerase II subunit RPB482.240.6328
46 Mapoly0006s0175 [PF13233] Complex1_LYR-like83.520.6110
47 Mapoly0033s0089 [PF03918] Cytochrome C biogenesis protein84.110.6218
48 Mapoly0004s0155 [PF13302] Acetyltransferase (GNAT) domain; [GO:0008080] N-acetyltransferase activity84.520.4765
49 Mapoly0005s0214 -85.160.6425
50 Mapoly0054s0012 -88.460.5657
Showing 1 to 50 of 200 records
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