Guide Gene
- Gene ID
- Mapoly0173s0018
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [KOG2351] RNA polymerase II, fourth largest subunit; [PTHR21297] DNA-DIRECTED RNA POLYMERASE II; [PF03874] RNA polymerase Rpb4; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [K03012] DNA-directed RNA polymerase II subunit RPB4
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0173s0018 [KOG2351] RNA polymerase II, fourth largest subunit; [PTHR21297] DNA-DIRECTED RNA POLYMERASE II; [PF03874] RNA polymerase Rpb4; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [K03012] DNA-directed RNA polymerase II subunit RPB4 0.00 1.0000 1 Mapoly0001s0441 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein 7.75 0.8012 2 Mapoly0019s0137 [PF03908] Sec20; [K08497] protein transport protein SEC20; [PTHR12825] BNIP1-RELATED; [PTHR12825:SF0] SUBFAMILY NOT NAMED 8.83 0.8108 3 Mapoly0033s0009 [PF07011] Protein of unknown function (DUF1313) 9.43 0.7230 4 Mapoly0039s0091 [GO:0016020] membrane; [GO:0030001] metal ion transport; [KOG2474] Zinc transporter and related ZIP domain-containing proteins; [PF02535] ZIP Zinc transporter; [GO:0046873] metal ion transmembrane transporter activity; [GO:0055085] transmembrane transport; [PTHR11065] SOLUTE CARRIER FAMILY 39 (METAL ION TRANSPORTER), MEMBER 11; [K07238] zinc transporter, ZIP family 9.95 0.8012 5 Mapoly0099s0054 [GO:0035064] methylated histone residue binding; [PTHR10333] INHIBITOR OF GROWTH PROTEIN; [PF12998] Inhibitor of growth proteins N-terminal histone-binding; [PF00628] PHD-finger; [GO:0005515] protein binding; [KOG1973] Chromatin remodeling protein, contains PHD Zn-finger; [GO:0016568] chromatin modification; [GO:0005634] nucleus 10.00 0.7732 6 Mapoly0094s0077 - 10.58 0.7937 7 Mapoly0001s0456 [KOG3473] RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C; [K03872] transcription elongation factor B, polypeptide 1; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR20648] FAMILY NOT NAMED; [PF03931] Skp1 family, tetramerisation domain 12.73 0.7964 8 Mapoly0066s0018 [GO:0055114] oxidation-reduction process; [PF02195] ParB-like nuclease domain; [KOG3388] Predicted transcription regulator/nuclease, contains ParB domain; [PTHR21348] UNCHARACTERIZED; [GO:0032542] sulfiredoxin activity 12.96 0.7269 9 Mapoly0102s0018 [PF06825] Heat shock factor binding protein 1; [KOG4117] Heat shock factor binding protein; [PTHR19424] HEAT SHOCK FACTOR BINDING PROTEIN 1 16.55 0.8031 10 Mapoly0064s0055 [PF13656] RNA polymerase Rpb3/Rpb11 dimerisation domain; [K03008] DNA-directed RNA polymerase II subunit RPB11; [PTHR13946] DNA-DIRECTED RNA POLYMERASE I,II,III; [KOG4392] RNA polymerase, subunit L 18.03 0.7990 11 Mapoly0067s0091 [PF07343] Protein of unknown function (DUF1475) 20.49 0.7841 12 Mapoly0033s0120 [PF00887] Acyl CoA binding protein; [GO:0000062] fatty-acyl-CoA binding; [PTHR23310] ACYL-COA-BINDING PROTEIN, ACBP 24.39 0.7961 13 Mapoly0033s0115 [PF09366] Protein of unknown function (DUF1997) 27.46 0.7662 14 Mapoly0166s0021 [PTHR12377] UNCHARACTERIZED; [KOG3381] Uncharacterized conserved protein; [PF01883] Domain of unknown function DUF59 31.62 0.7444 15 Mapoly0009s0063 [PTHR23322] FAS-ASSOCIATED PROTEIN; [PTHR23322:SF6] FAS-ASSOCIATED FACTOR-RELATED; [GO:0005515] protein binding; [PF14555] UBA-like domain; [KOG1364] Predicted ubiquitin regulatory protein, contains UAS and UBX domains; [PF00789] UBX domain; [PF13899] Thioredoxin-like 32.50 0.7342 16 Mapoly0081s0075 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED 34.47 0.7924 17 Mapoly0038s0068 [PTHR14534:SF2] SUBFAMILY NOT NAMED; [PF09783] Vacuolar import and degradation protein; [PTHR14534] FAMILY NOT NAMED 34.93 0.7878 18 Mapoly0031s0114 [PF11976] Ubiquitin-2 like Rad60 SUMO-like; [PTHR10562] SMALL UBIQUITIN-RELATED MODIFIER; [KOG1769] Ubiquitin-like proteins; [K12160] small ubiquitin-related modifier 34.96 0.7844 19 Mapoly0086s0014 [PF06677] Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); [PTHR16537] FAMILY NOT NAMED 38.34 0.7535 20 Mapoly0025s0126 [KOG4764] Uncharacterized conserved protein; [PF05160] DSS1/SEM1 family; [PTHR16771:SF0] SUBFAMILY NOT NAMED; [PTHR16771] 26 PROTEASOME COMPLEX SUBUNIT DSS1 39.47 0.7754 21 Mapoly0073s0035 [PTHR12828:SF3] PROTEASOME MATURATION PROTEIN (UMP1); [K11599] proteasome maturation protein; [PF05348] Proteasome maturation factor UMP1; [KOG3061] Proteasome maturation factor; [PTHR12828] PROTEASOME MATURATION PROTEIN (UMP1) 41.82 0.7876 22 Mapoly0070s0078 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR13355] GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE; [PTHR13355:SF2] gb def: acetyltransferase (gnat) family [caenorhabditis elegans] 42.78 0.6274 23 Mapoly0029s0010 [KOG0143] Iron/ascorbate family oxidoreductases; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN 43.45 0.6681 24 Mapoly0151s0039 [PTHR13345:SF2] NUT2; [KOG3046] Transcription factor, subunit of SRB subcomplex of RNA polymerase II; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [PF09748] Transcription factor subunit Med10 of Mediator complex; [PTHR13345] NUT2 AND UXT 44.74 0.7020 25 Mapoly0011s0027 [K01814] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]; [PTHR21169] 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE; [GO:0000105] histidine biosynthetic process; [5.3.1.16] 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase.; [GO:0003949] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; [KOG3055] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; [PF00977] Histidine biosynthesis protein; [PTHR21169:SF0] SUBFAMILY NOT NAMED 44.88 0.7546 26 Mapoly0001s0009 [PTHR10540:SF7] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7; [GO:0005515] protein binding; [PF13012] Maintenance of mitochondrial structure and function; [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1556] 26S proteasome regulatory complex, subunit RPN8/PSMD7; [K03038] 26S proteasome regulatory subunit N8 45.89 0.7760 27 Mapoly0054s0023 [PTHR24320] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [KOG1208] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [PF00106] short chain dehydrogenase 47.86 0.7288 28 Mapoly0014s0053 [KOG4408] Putative Mg2+ and Co2+ transporter CorD; [PF04379] Protein of unknown function (DUF525); [PTHR14289] F-BOX ONLY PROTEIN 3; [K10290] F-box protein 3 49.23 0.7845 29 Mapoly0011s0077 [PTHR23419:SF0] SUBFAMILY NOT NAMED; [KOG3338] Divalent cation tolerance-related protein; [GO:0010038] response to metal ion; [PF03091] CutA1 divalent ion tolerance protein; [K03926] periplasmic divalent cation tolerance protein; [PTHR23419] DIVALENT CATION TOLERANCE CUTA-RELATED 49.50 0.7676 30 Mapoly0072s0064 [PTHR12718] CELL CYCLE CONTROL PROTEIN CWF15; [K12863] protein CWC15; [GO:0005681] spliceosomal complex; [GO:0000398] mRNA splicing, via spliceosome; [PF04889] Cwf15/Cwc15 cell cycle control protein; [KOG3228] Uncharacterized conserved protein 53.67 0.7688 31 Mapoly0188s0010 - 54.08 0.7796 32 Mapoly0052s0030 [PF15243] Anaphase-promoting complex subunit 15 55.68 0.6467 33 Mapoly0058s0078 [2.8.1.2] 3-mercaptopyruvate sulfurtransferase.; [PTHR11364:SF0] THIOSULFATE SULFURTRANSFERASE; [KOG1529] Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase; [PF00581] Rhodanese-like domain; [K01011] thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]; [PTHR11364] THIOSULFATE SULFERTANSFERASE; [2.8.1.1] Thiosulfate sulfurtransferase. 57.24 0.7542 34 Mapoly0028s0075 [GO:0003677] DNA binding; [KOG1756] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H4 57.55 0.7770 35 Mapoly0148s0019 [PTHR14233] DUF914-RELATED; [GO:0016021] integral to membrane; [PTHR14233:SF4] SUBFAMILY NOT NAMED; [GO:0006810] transport; [PF06027] Eukaryotic protein of unknown function (DUF914); [KOG2766] Predicted membrane protein 58.02 0.7572 36 Mapoly0013s0175 [GO:0016787] hydrolase activity; [PF07687] Peptidase dimerisation domain; [PTHR11014] PEPTIDASE M20 FAMILY MEMBER; [GO:0008152] metabolic process; [KOG2276] Metalloexopeptidases; [3.5.1.16] Acetylornithine deacetylase.; [PF01546] Peptidase family M20/M25/M40; [K01438] acetylornithine deacetylase [EC:3.5.1.16]; [PTHR11014:SF7] ACETYLORNITHINE DEACETYLASE 58.40 0.7709 37 Mapoly0037s0056 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H4 60.52 0.7579 38 Mapoly0016s0041 [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF4] PROTEASOME SUBUNIT BETA TYPE 6,9; [K02738] 20S proteasome subunit beta 1 [EC:3.4.25.1]; [KOG0174] 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA 60.62 0.7716 39 Mapoly0005s0214 - 62.03 0.7675 40 Mapoly0015s0101 [PTHR31134] FAMILY NOT NAMED 62.16 0.7696 41 Mapoly0010s0099 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR14209] ISOAMYL ACETATE-HYDROLYZING ESTERASE 1; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process; [KOG3035] Isoamyl acetate-hydrolyzing esterase 63.64 0.6046 42 Mapoly0091s0038 [KOG3043] Predicted hydrolase related to dienelactone hydrolase; [GO:0016787] hydrolase activity; [PTHR17630] DIENELACTONE HYDROLASE; [PF01738] Dienelactone hydrolase family 64.59 0.7663 43 Mapoly0107s0014 - 64.65 0.7394 44 Mapoly0004s0229 - 66.25 0.7060 45 Mapoly0007s0013 [PF01466] Skp1 family, dimerisation domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [K03094] S-phase kinase-associated protein 1; [KOG1724] SCF ubiquitin ligase, Skp1 component; [PTHR11165] SKP1; [PF03931] Skp1 family, tetramerisation domain 66.35 0.7021 46 Mapoly0005s0080 [GO:0006355] regulation of transcription, DNA-dependent; [KOG0794] CDK8 kinase-activating protein cyclin C; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity 66.54 0.7080 47 Mapoly0073s0056 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG3252] Uncharacterized conserved protein; [PTHR13022] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family 72.24 0.7768 48 Mapoly0102s0010 [PF10235] Microtubule-associated protein CRIPT; [KOG3476] Microtubule-associated protein CRIPT; [PTHR11800] DNA-DIRECTED RNA POLYMERASE 72.87 0.6874 49 Mapoly0042s0032 [PF13259] Protein of unknown function (DUF4050) 75.72 0.7452 50 Mapoly0092s0011 [PF06093] Spt4/RpoE2 zinc finger; [KOG3490] Transcription elongation factor SPT4; [PTHR12882:SF0] SUBFAMILY NOT NAMED; [PTHR12882] SUPPRESSOR OF TY 4 77.33 0.7207