Guide Gene
- Gene ID
- Mapoly0028s0075
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0003677] DNA binding; [KOG1756] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H4
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0028s0075 [GO:0003677] DNA binding; [KOG1756] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H4 0.00 1.0000 1 Mapoly0001s0009 [PTHR10540:SF7] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7; [GO:0005515] protein binding; [PF13012] Maintenance of mitochondrial structure and function; [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1556] 26S proteasome regulatory complex, subunit RPN8/PSMD7; [K03038] 26S proteasome regulatory subunit N8 1.41 0.9188 2 Mapoly0115s0039 [KOG1780] Small Nuclear ribonucleoprotein G; [K11099] small nuclear ribonucleoprotein G; [PF01423] LSM domain; [PTHR10553] SMALL NUCLEAR RIBONUCLEOPROTEIN 1.41 0.9363 3 Mapoly0005s0205 [PF00226] DnaJ domain; [KOG0719] Molecular chaperone (DnaJ superfamily); [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER 3.00 0.9166 4 Mapoly0036s0142 [GO:0003677] DNA binding; [KOG1757] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H4 3.46 0.9162 5 Mapoly0011s0134 - 4.58 0.8807 6 Mapoly0059s0079 [KOG2014] SMT3/SUMO-activating complex, AOS1/RAD31 component; [PF00899] ThiF family; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [K10684] ubiquitin-like 1-activating enzyme E1 A [EC:6.3.2.19] 4.90 0.8994 7 Mapoly0013s0048 [KOG0381] HMG box-containing protein; [PF00505] HMG (high mobility group) box; [PTHR13711] SWI/SNF-RELATED CHROMATIN BINDING PROTEIN 5.29 0.9048 8 Mapoly0024s0100 [GO:0005524] ATP binding; [PTHR11669] REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT; [KOG0990] Replication factor C, subunit RFC5; [PF00004] ATPase family associated with various cellular activities (AAA); [PF08542] Replication factor C C-terminal domain; [K10756] replication factor C subunit 3/5 5.48 0.8917 9 Mapoly0042s0032 [PF13259] Protein of unknown function (DUF4050) 6.00 0.8843 10 Mapoly0034s0111 [GO:0003677] DNA binding; [GO:0000786] nucleosome; [GO:0005634] nucleus; [KOG1744] Histone H2B; [PF00125] Core histone H2A/H2B/H3/H4; [K11252] histone H2B; [PTHR23428] HISTONE H2B 6.32 0.9005 11 Mapoly0052s0043 [K11098] small nuclear ribonucleoprotein F; [PTHR11021] SMALL NUCLEAR RIBONUCLEOPROTEIN F (SNRNP-F); [KOG3482] Small nuclear ribonucleoprotein (snRNP) SMF; [PF01423] LSM domain 6.93 0.9090 12 Mapoly0036s0153 [PTHR10971:SF5] MITOTIC CHECKPOINT PROTEIN BUB3; [PTHR10971] MRNA EXPORT FACTOR AND BUB3; [GO:0005515] protein binding; [K02180] cell cycle arrest protein BUB3; [KOG1036] Mitotic spindle checkpoint protein BUB3, WD repeat superfamily; [PF00400] WD domain, G-beta repeat 7.21 0.8956 13 Mapoly0019s0137 [PF03908] Sec20; [K08497] protein transport protein SEC20; [PTHR12825] BNIP1-RELATED; [PTHR12825:SF0] SUBFAMILY NOT NAMED 8.12 0.8707 14 Mapoly0060s0044 [PF05514] HR-like lesion-inducing; [PTHR31474] FAMILY NOT NAMED 9.95 0.8999 15 Mapoly0005s0021 [PF13266] Protein of unknown function (DUF4057); [PTHR31132] FAMILY NOT NAMED 11.40 0.8770 16 Mapoly0087s0074 [GO:0005685] U1 snRNP; [PF06220] U1 zinc finger; [GO:0008270] zinc ion binding; [GO:0000398] mRNA splicing, via spliceosome; [KOG3454] U1 snRNP-specific protein C; [GO:0000387] spliceosomal snRNP assembly; [PTHR31148] FAMILY NOT NAMED 12.65 0.8724 17 Mapoly0071s0008 [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [KOG0107] Alternative splicing factor SRp20/9G8 (RRM superfamily); [GO:0003676] nucleic acid binding; [PTHR10548] SPLICING FACTOR, ARGININE/SERINE-RICH; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13.08 0.8520 18 Mapoly0003s0313 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [K07977] Arf/Sar family, other; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding 17.20 0.8436 19 Mapoly0073s0056 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG3252] Uncharacterized conserved protein; [PTHR13022] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family 18.97 0.9106 20 Mapoly0083s0043 [GO:0008375] acetylglucosaminyltransferase activity; [GO:0016020] membrane; [PF02485] Core-2/I-Branching enzyme; [PTHR31042] FAMILY NOT NAMED 19.97 0.8111 21 Mapoly0028s0141 [GO:0003723] RNA binding; [KOG2523] Predicted RNA-binding protein with PUA domain; [PF01472] PUA domain; [PTHR22798] MCT-1 PROTEIN; [K07575] PUA domain protein 21.79 0.8787 22 Mapoly0010s0048 - 22.14 0.8307 23 Mapoly0014s0053 [KOG4408] Putative Mg2+ and Co2+ transporter CorD; [PF04379] Protein of unknown function (DUF525); [PTHR14289] F-BOX ONLY PROTEIN 3; [K10290] F-box protein 3 23.07 0.8761 24 Mapoly0044s0132 [GO:0005840] ribosome; [K02953] small subunit ribosomal protein S13e; [PTHR11885] RIBOSOMAL PROTEIN S15P/S13E; [KOG0400] 40S ribosomal protein S13; [PF00312] Ribosomal protein S15; [PF08069] Ribosomal S13/S15 N-terminal domain; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation 24.00 0.9035 25 Mapoly0011s0143 [PTHR15481:SF0] SUBFAMILY NOT NAMED; [K14325] RNA-binding protein with serine-rich domain 1; [PTHR15481] RIBONUCLEIC ACID BINDING PROTEIN S1; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 24.29 0.8502 26 Mapoly0037s0056 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H4 24.66 0.8431 27 Mapoly0102s0018 [PF06825] Heat shock factor binding protein 1; [KOG4117] Heat shock factor binding protein; [PTHR19424] HEAT SHOCK FACTOR BINDING PROTEIN 1 24.68 0.8738 28 Mapoly0146s0045 [GO:0003723] RNA binding; [PTHR11207:SF1] RIBONUCLEASE III; [PF00035] Double-stranded RNA binding motif; [GO:0004525] ribonuclease III activity; [GO:0016075] rRNA catabolic process; [PTHR11207] RIBONUCLEASE III 24.70 0.8492 29 Mapoly0002s0271 - 25.75 0.7677 30 Mapoly0036s0154 [KOG2606] OTU (ovarian tumor)-like cysteine protease; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PTHR12419:SF10] gb def: ENSANGP00000019868 (Fragment); [PF02338] OTU-like cysteine protease 25.88 0.8459 31 Mapoly0020s0150 [GO:0005840] ribosome; [KOG3418] 60S ribosomal protein L27; [PF01777] Ribosomal L27e protein family; [K02901] large subunit ribosomal protein L27e; [PTHR10497] 60S RIBOSOMAL PROTEIN L27; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR10497:SF0] 60S RIBOSOMAL PROTEIN L27; [GO:0006412] translation 27.00 0.9023 32 Mapoly0066s0004 [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [KOG0496] Beta-galactosidase; [GO:0005975] carbohydrate metabolic process; [PF02140] Galactose binding lectin domain; [GO:0030246] carbohydrate binding; [PTHR23421] BETA-GALACTOSIDASE RELATED; [PF01301] Glycosyl hydrolases family 35 27.71 0.7810 33 Mapoly0016s0041 [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF4] PROTEASOME SUBUNIT BETA TYPE 6,9; [K02738] 20S proteasome subunit beta 1 [EC:3.4.25.1]; [KOG0174] 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA 27.96 0.8701 34 Mapoly0002s0249 [GO:0006289] nucleotide-excision repair; [GO:0005515] protein binding; [KOG0011] Nucleotide excision repair factor NEF2, RAD23 component; [PTHR10621] UV EXCISION REPAIR PROTEIN RAD23; [PF09280] XPC-binding domain; [PF00627] UBA/TS-N domain; [PF00240] Ubiquitin family; [GO:0003684] damaged DNA binding; [GO:0043161] proteasomal ubiquitin-dependent protein catabolic process; [K10839] UV excision repair protein RAD23 28.90 0.7949 35 Mapoly0011s0083 [PTHR10997] IMPORTIN-7, 8, 11 29.09 0.8340 36 Mapoly0069s0082 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding 31.46 0.8298 37 Mapoly0029s0079 [GO:0042393] histone binding; [PF12165] Domain of unknown function (DUF3594); [GO:0006355] regulation of transcription, DNA-dependent; [KOG1632] Uncharacterized PHD Zn-finger protein; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR12321] CPG BINDING PROTEIN 32.25 0.8122 38 Mapoly0058s0078 [2.8.1.2] 3-mercaptopyruvate sulfurtransferase.; [PTHR11364:SF0] THIOSULFATE SULFURTRANSFERASE; [KOG1529] Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase; [PF00581] Rhodanese-like domain; [K01011] thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]; [PTHR11364] THIOSULFATE SULFERTANSFERASE; [2.8.1.1] Thiosulfate sulfurtransferase. 32.45 0.8225 39 Mapoly0009s0063 [PTHR23322] FAS-ASSOCIATED PROTEIN; [PTHR23322:SF6] FAS-ASSOCIATED FACTOR-RELATED; [GO:0005515] protein binding; [PF14555] UBA-like domain; [KOG1364] Predicted ubiquitin regulatory protein, contains UAS and UBX domains; [PF00789] UBX domain; [PF13899] Thioredoxin-like 34.06 0.7636 40 Mapoly0003s0236 [PTHR11746] O-METHYLTRANSFERASE; [GO:0005737] cytoplasm; [PF02545] Maf-like protein; [KOG1509] Predicted nucleic acid-binding protein ASMTL; [K06287] septum formation protein 34.28 0.8588 41 Mapoly0065s0048 [PTHR11060:SF0] PROTEIN MEMO1; [K06990] aspartate dehydrogenase [EC:1.4.1.21]; [PF01875] Memo-like protein; [KOG3086] Predicted dioxygenase; [PTHR11060] PROTEIN MEMO1 35.72 0.8507 42 Mapoly0239s0006 [PTHR31570] FAMILY NOT NAMED 36.17 0.7706 43 Mapoly0043s0018 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein 36.28 0.8925 44 Mapoly0003s0086 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H4 36.33 0.8495 45 Mapoly0108s0016 - 37.35 0.8345 46 Mapoly0026s0131 [GO:0005840] ribosome; [PF01907] Ribosomal protein L37e; [K02922] large subunit ribosomal protein L37e; [PTHR10768] 60S RIBOSOMAL PROTEIN L37; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3475] 60S ribosomal protein L37; [GO:0006412] translation 40.00 0.8886 47 Mapoly0013s0165 [PTHR10804:SF13] METHIONINE AMINOPEPTIDASE 1; [K01265] methionyl aminopeptidase [EC:3.4.11.18]; [3.4.11.18] Methionyl aminopeptidase.; [KOG2738] Putative methionine aminopeptidase; [PF00557] Metallopeptidase family M24; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) 40.41 0.8448 48 Mapoly0007s0163 [PTHR22055] 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN (PDGF-ASSOCIATED PROTEIN); [PF10252] Casein kinase substrate phosphoprotein PP28; [KOG3375] Phosphoprotein/predicted coiled-coil protein 41.12 0.8365 49 Mapoly0082s0061 - 41.83 0.7153 50 Mapoly0054s0044 [GO:0005840] ribosome; [K02872] large subunit ribosomal protein L13Ae; [PTHR11545:SF3] 60S RIBOSOMAL PROTEIN L13A; [KOG3204] 60S ribosomal protein L13a; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13 42.05 0.8868