Guide Gene

Gene ID
Mapoly0050s0102
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG3297] DNA-directed RNA polymerase subunit E'; [K03022] DNA-directed RNA polymerase III subunit RPC8; [PF03876] SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR12709:SF1] DNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDE RPB7; [2.7.7.6] DNA-directed RNA polymerase.; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III; [PF08292] RNA polymerase III subunit Rpc25

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0050s0102 [KOG3297] DNA-directed RNA polymerase subunit E'; [K03022] DNA-directed RNA polymerase III subunit RPC8; [PF03876] SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR12709:SF1] DNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDE RPB7; [2.7.7.6] DNA-directed RNA polymerase.; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III; [PF08292] RNA polymerase III subunit Rpc25 0.00 1.0000
1 Mapoly0175s0005 [GO:0008152] metabolic process; [KOG4192] Uncharacterized conserved protein; [GO:0016846] carbon-sulfur lyase activity; [PF04828] Glutathione-dependent formaldehyde-activating enzyme7.000.6774
2 Mapoly0033s0133 [PTHR21192] NUCLEAR PROTEIN E3-3; [K09008] hypothetical protein; [PF04430] Protein of unknown function (DUF498/DUF598)9.700.7150
3 Mapoly0109s0047 [PF12554] Mitotic-spindle organizing gamma-tubulin ring associated10.950.7067
4 Mapoly0004s0154 [KOG1344] Predicted histone deacetylase; [PF00850] Histone deacetylase domain; [PTHR10625] HISTONE DEACETYLASE11.490.6111
5 Mapoly0096s0074 [KOG2702] Predicted panthothenate kinase/uridine kinase-related protein; [PTHR10285] URIDINE KINASE; [PF13238] AAA domain11.530.6509
6 Mapoly0001s0344 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF00561] alpha/beta hydrolase fold14.900.6088
7 Mapoly0010s0076 [2.3.1.181] Lipoyl(octanoyl) transferase.; [PTHR10993] OCTANOYLTRANSFERASE; [K03801] lipoyl(octanoyl) transferase [EC:2.3.1.181]; [KOG0325] Lipoyltransferase; [GO:0006464] cellular protein modification process; [PF03099] Biotin/lipoate A/B protein ligase family15.390.6860
8 Mapoly0197s0006 -18.330.6814
9 Mapoly0092s0011 [PF06093] Spt4/RpoE2 zinc finger; [KOG3490] Transcription elongation factor SPT4; [PTHR12882:SF0] SUBFAMILY NOT NAMED; [PTHR12882] SUPPRESSOR OF TY 425.690.6818
10 Mapoly0090s0027 -25.920.6478
11 Mapoly0121s0035 [PF10172] Det1 complexing ubiquitin ligase; [GO:0003676] nucleic acid binding; [PF02037] SAP domain29.730.6220
12 Mapoly0090s0033 -37.420.6578
13 Mapoly0121s0042 [GO:0030833] regulation of actin filament polymerization; [GO:0034314] Arp2/3 complex-mediated actin nucleation; [GO:0005524] ATP binding; [GO:0005856] cytoskeleton; [PF00022] Actin; [GO:0005885] Arp2/3 protein complex; [KOG0678] Actin-related protein Arp2/3 complex, subunit Arp3; [PTHR11937:SF31] ACTIN-LIKE PROTEIN 3, ACL3; [PTHR11937] ACTIN37.740.5955
14 Mapoly0023s0087 [PF14966] DNA repair REX1-B39.600.6408
15 Mapoly0046s0116 [PF11326] Protein of unknown function (DUF3128)39.940.6190
16 Mapoly0015s0101 [PTHR31134] FAMILY NOT NAMED40.400.6851
17 Mapoly0027s0066 [PF05047] Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain; [KOG3445] Mitochondrial/chloroplast ribosomal protein 36a; [PTHR21396] 39S RIBOSOMAL PROTEIN L4341.860.6726
18 Mapoly0028s0045 -45.690.6534
19 Mapoly0005s0075 [GO:0055114] oxidation-reduction process; [GO:0009073] aromatic amino acid family biosynthetic process; [PF01959] 3-dehydroquinate synthase (EC 4.6.1.3); [GO:0016491] oxidoreductase activity; [GO:0003856] 3-dehydroquinate synthase activity45.730.6538
20 Mapoly0046s0110 [K00540] formate acetyltransferase activating enzyme [EC:1.97.1.4]; [1.-.-.-] Oxidoreductases.45.960.6397
21 Mapoly0033s0009 [PF07011] Protein of unknown function (DUF1313)51.650.6270
22 Mapoly0152s0024 [PTHR21026:SF2] gb def: Putative 39S ribosomal protein L32, mitochondrial precursor; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR21026] 39S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL; [GO:0006412] translation; [PF01783] Ribosomal L32p protein family52.250.6450
23 Mapoly0075s0047 [GO:0006807] nitrogen compound metabolic process; [GO:0016151] nickel cation binding; [PF01730] UreF52.920.6101
24 Mapoly0179s0002 [GO:0005840] ribosome; [PTHR21011] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6; [PF01250] Ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [K02990] small subunit ribosomal protein S6; [GO:0019843] rRNA binding; [GO:0006412] translation56.090.6684
25 Mapoly0010s0009 [PTHR12403] MBP-1 INTERACTING PROTEIN-2A; [PF04628] Sedlin, N-terminal conserved region; [GO:0005622] intracellular; [KOG3444] Uncharacterized conserved protein; [GO:0006888] ER to Golgi vesicle-mediated transport59.850.6722
26 Mapoly0034s0051 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [KOG1730] Thioredoxin-like protein; [GO:0006662] glycerol ether metabolic process; [PF06201] PITH domain; [PTHR10438] THIOREDOXIN61.480.6689
27 Mapoly0009s0030 [PF06984] Mitochondrial 39-S ribosomal protein L47 (MRP-L47); [GO:0005761] mitochondrial ribosome; [GO:0003735] structural constituent of ribosome; [PTHR21183] RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED; [GO:0006412] translation61.970.6558
28 Mapoly0016s0085 [PTHR15590:SF0] SUBFAMILY NOT NAMED; [PTHR15590] FAMILY NOT NAMED; [PF08991] Domain of unknown function (DUF1903)62.550.6672
29 Mapoly0031s0028 -64.370.6381
30 Mapoly0100s0057 [GO:0009607] response to biotic stimulus; [PTHR31213] FAMILY NOT NAMED; [PF00407] Pathogenesis-related protein Bet v I family; [GO:0006952] defense response64.450.6427
31 Mapoly0106s0034 [PTHR12936] ANAPHASE-PROMOTING COMPLEX 10; [KOG3437] Anaphase-promoting complex (APC), subunit 10; [PF03256] Anaphase-promoting complex, subunit 10 (APC10); [K03357] anaphase-promoting complex subunit 1070.010.6601
32 Mapoly0007s0266 -82.990.6342
33 Mapoly0056s0039 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation83.960.6570
34 Mapoly0010s0075 -87.750.5744
35 Mapoly0103s0044 [PF09296] NADH pyrophosphatase-like rudimentary NUDIX domain; [PF09297] NADH pyrophosphatase zinc ribbon domain; [GO:0016787] hydrolase activity; [K03426] NAD+ diphosphatase [EC:3.6.1.22]; [3.6.1.22] NAD(+) diphosphatase.; [GO:0046872] metal ion binding; [PTHR22769] MUTT/NUDIX HYDROLASE; [PF00293] NUDIX domain89.390.5779
36 Mapoly0011s0141 [1.1.1.219] Dihydrokaempferol 4-reductase.; [K00091] dihydroflavonol-4-reductase [EC:1.1.1.219]; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE90.200.6384
37 Mapoly0087s0005 [PF08186] Wound-inducible basic protein family91.780.6459
38 Mapoly0001s0201 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [K02943] large subunit ribosomal protein LP2; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein91.870.6364
39 Mapoly0083s0082 [PTHR15840] CGI-121 FAMILY MEMBER; [KOG4066] Cell growth regulatory protein CGR11; [PF08617] Kinase binding protein CGI-12194.100.6388
40 Mapoly0010s0068 -94.200.6396
41 Mapoly0109s0030 [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis97.280.6442
42 Mapoly0011s0115 -99.300.4902
43 Mapoly0011s0027 [K01814] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]; [PTHR21169] 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE; [GO:0000105] histidine biosynthetic process; [5.3.1.16] 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase.; [GO:0003949] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; [KOG3055] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; [PF00977] Histidine biosynthesis protein; [PTHR21169:SF0] SUBFAMILY NOT NAMED100.170.6433
44 Mapoly0020s0169 [PTHR15852] FAMILY NOT NAMED102.850.5803
45 Mapoly0030s0108 [GO:0006378] mRNA polyadenylation; [K14397] cleavage and polyadenylation specificity factor subunit 5; [GO:0005849] mRNA cleavage factor complex; [PF13869] Nucleotide hydrolase; [GO:0003729] mRNA binding; [PTHR13047] PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT; [KOG1689] mRNA cleavage factor I subunit103.310.6462
46 Mapoly0016s0014 [K03635] molybdopterin synthase catalytic subunit [EC:2.-.-.-]; [PTHR23404:SF2] MOLYBDOPTERIN SYNTHASE LARGE SUBUNIT 2; [GO:0006777] Mo-molybdopterin cofactor biosynthetic process; [PTHR23404] MOLYBDOPTERIN SYNTHASE RELATED; [KOG3307] Molybdopterin converting factor subunit 2; [PF02391] MoaE protein; [2.-.-.-] Transferases.103.980.5911
47 Mapoly0164s0021 [PF09597] IGR protein motif104.070.6373
48 Mapoly0102s0033 [GO:0005840] ribosome; [K02899] large subunit ribosomal protein L27; [GO:0003735] structural constituent of ribosome; [KOG4600] Mitochondrial ribosomal protein MRP7 (L2); [GO:0005622] intracellular; [PTHR15893] RIBOSOMAL PROTEIN L27; [GO:0006412] translation; [PF01016] Ribosomal L27 protein105.320.5831
49 Mapoly0029s0092 [GO:0006561] proline biosynthetic process; [PF03807] NADP oxidoreductase coenzyme F420-dependent; [K00286] pyrroline-5-carboxylate reductase [EC:1.5.1.2]; [GO:0055114] oxidation-reduction process; [GO:0004735] pyrroline-5-carboxylate reductase activity; [KOG3124] Pyrroline-5-carboxylate reductase; [1.5.1.2] Pyrroline-5-carboxylate reductase.; [PTHR11645] PYRROLINE-5-CARBOXYLATE REDUCTASE; [PF14748] Pyrroline-5-carboxylate reductase dimerisation105.640.6506
50 Mapoly0053s0026 -107.120.6454
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