Guide Gene

Gene ID
Mapoly0088s0021
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006355] regulation of transcription, DNA-dependent; [GO:0006289] nucleotide-excision repair; [K10845] TFIIH basal transcription factor complex TTD-A subunit; [PF06331] Transcription factor TFIIH complex subunit Tfb5; [KOG3451] Uncharacterized conserved protein; [GO:0000439] core TFIIH complex

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0088s0021 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006289] nucleotide-excision repair; [K10845] TFIIH basal transcription factor complex TTD-A subunit; [PF06331] Transcription factor TFIIH complex subunit Tfb5; [KOG3451] Uncharacterized conserved protein; [GO:0000439] core TFIIH complex 0.00 1.0000
1 Mapoly0012s0137 [PTHR23027:SF2] gb def: Predicted protein; [PTHR23027] UNCHARACTERIZED; [GO:0005739] mitochondrion; [PF02297] Cytochrome oxidase c subunit VIb; [GO:0004129] cytochrome-c oxidase activity6.160.7786
2 Mapoly0175s0005 [GO:0008152] metabolic process; [KOG4192] Uncharacterized conserved protein; [GO:0016846] carbon-sulfur lyase activity; [PF04828] Glutathione-dependent formaldehyde-activating enzyme6.780.7044
3 Mapoly0016s0064 [PTHR21385:SF0] SUBFAMILY NOT NAMED; [PTHR21385] ZINC FINGER PROTEIN-RELATED7.480.7494
4 Mapoly0022s0036 [PF03937] Flavinator of succinate dehydrogenase; [PTHR12469] PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL; [PTHR12469:SF2] gb def: Hypothetical protein 12F11.24010.100.7702
5 Mapoly0042s0019 [PF12689] Acid Phosphatase; [GO:0016791] phosphatase activity; [PTHR17901] FAMILY NOT NAMED; [KOG4549] Magnesium-dependent phosphatase10.250.7229
6 Mapoly0045s0083 [PTHR11527] SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY; [PF00011] Hsp20/alpha crystallin family11.750.6610
7 Mapoly0033s0085 [KOG2944] Glyoxalase; [K01759] lactoylglutathione lyase [EC:4.4.1.5]; [PTHR10374:SF2] GLYOXALASE DOMAIN-CONTAINING PROTEIN 4; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [4.4.1.5] Lactoylglutathione lyase.; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily13.420.7589
8 Mapoly0044s0040 -13.490.7804
9 Mapoly0150s0018 [PTHR21236] GOLGI MEMBRANE PROTEIN YIP1; [KOG3103] Rab GTPase interacting factor, Golgi membrane protein; [PTHR21236:SF2] GOLGI MEMBRANE PROTEIN SB140 (YIP1B)13.710.7700
10 Mapoly0121s0038 [GO:0016020] membrane; [PTHR31965] FAMILY NOT NAMED; [PF00892] EamA-like transporter family14.700.6991
11 Mapoly0048s0106 -16.090.7525
12 Mapoly0050s0109 -18.730.7433
13 Mapoly0016s0129 [PF04419] 4F5 protein family; [PF12907] Zinc-binding19.490.7596
14 Mapoly0055s0070 -20.200.7255
15 Mapoly0005s0072 [GO:0019867] outer membrane; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [PTHR21666] PEPTIDASE-RELATED; [PF06725] 3D domain; [GO:0009254] peptidoglycan turnover20.740.6805
16 Mapoly0031s0143 [GO:0016857] racemase and epimerase activity, acting on carbohydrates and derivatives; [GO:0005737] cytoplasm; [PF05336] Domain of unknown function (DUF718); [GO:0019299] rhamnose metabolic process22.800.6832
17 Mapoly0015s0105 -24.660.7224
18 Mapoly0050s0076 -27.460.7253
19 Mapoly0033s0142 -28.720.7258
20 Mapoly0033s0133 [PTHR21192] NUCLEAR PROTEIN E3-3; [K09008] hypothetical protein; [PF04430] Protein of unknown function (DUF498/DUF598)30.400.7238
21 Mapoly0002s0103 [PTHR12791] GOLGI SNARE BET1-RELATED; [GO:0005515] protein binding; [PTHR12791:SF5] BET1-LIKE SNARE 1; [KOG3385] V-SNARE; [K08504] blocked early in transport 1; [PF05739] SNARE domain30.500.7403
22 Mapoly0093s0047 [PF01239] Protein prenyltransferase alpha subunit repeat; [2.5.1.58] Protein farnesyltransferase.; [GO:0008318] protein prenyltransferase activity; [GO:0018342] protein prenylation; [2.5.1.59] Protein geranylgeranyltransferase type I.; [K05955] protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [EC:2.5.1.58 2.5.1.59]; [PTHR11129] PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT; [KOG0530] Protein farnesyltransferase, alpha subunit/protein geranylgeranyltransferase type I, alpha subunit; [PTHR11129:SF1] PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT31.750.6527
23 Mapoly0009s0144 -33.050.7000
24 Mapoly0033s0089 [PF03918] Cytochrome C biogenesis protein33.500.7195
25 Mapoly0181s0011 [PF06747] CHCH domain; [PTHR13626] FAMILY NOT NAMED34.500.6865
26 Mapoly0010s0158 -35.780.6124
27 Mapoly0052s0096 -37.790.6817
28 Mapoly0011s0115 -38.420.5532
29 Mapoly0121s0046 -41.810.6794
30 Mapoly0048s0027 [PF12681] Glyoxalase-like domain42.400.6676
31 Mapoly0073s0071 [GO:0016787] hydrolase activity; [PF07687] Peptidase dimerisation domain; [3.5.1.14] Aminoacylase.; [PTHR11014] PEPTIDASE M20 FAMILY MEMBER; [GO:0008152] metabolic process; [PF01546] Peptidase family M20/M25/M40; [K14677] aminoacylase [EC:3.5.1.14]; [KOG2275] Aminoacylase ACY1 and related metalloexopeptidases43.630.6700
32 Mapoly0038s0105 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger)44.720.6551
33 Mapoly0043s0129 [PTHR11480] SAPOSIN-RELATED; [PF05184] Saposin-like type B, region 1; [KOG1340] Prosaposin; [PF03489] Saposin-like type B, region 2; [GO:0006629] lipid metabolic process50.800.6517
34 Mapoly0087s0019 -54.700.6915
35 Mapoly0020s0061 [PTHR12621] CYSTEINE AND HISTIDINE-RICH DOMAIN (CHORD)-CONTAINING PROTEIN; [PF04968] CHORD; [K13458] disease resistance protein57.880.6260
36 Mapoly0025s0099 [K03120] transcription initiation factor TFIID TATA-box-binding protein; [GO:0003677] DNA binding; [GO:0006352] DNA-dependent transcription, initiation; [PF00352] Transcription factor TFIID (or TATA-binding protein, TBP); [KOG3302] TATA-box binding protein (TBP), component of TFIID and TFIIIB; [PTHR10126] TATA-BOX BINDING PROTEIN62.100.7188
37 Mapoly0035s0140 -62.760.6452
38 Mapoly0043s0020 [PTHR16875] FAMILY NOT NAMED; [PTHR16875:SF0] SUBFAMILY NOT NAMED; [PF10961] Protein of unknown function (DUF2763)63.000.6758
39 Mapoly0112s0015 [PTHR12373] ENHANCER OF RUDIMENTARY ERH; [PF01133] Enhancer of rudimentary; [KOG1766] Enhancer of rudimentary; [GO:0007049] cell cycle63.210.6836
40 Mapoly0059s0090 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein64.400.6658
41 Mapoly0136s0032 [PTHR23029] PHOSPHOGLYCERATE MUTASE; [5.4.2.1] Transferred entry: 5.4.2.11 and 5.4.2.12.; [KOG0235] Phosphoglycerate mutase; [K01834] phosphoglycerate mutase [EC:5.4.2.1]; [PF00300] Histidine phosphatase superfamily (branch 1)64.580.6214
42 Mapoly0074s0078 [PF13459] 4Fe-4S single cluster domain; [PF00226] DnaJ domain; [PTHR24076] FAMILY NOT NAMED67.080.5886
43 Mapoly0094s0043 [GO:0005515] protein binding; [K07170] GAF domain-containing protein; [PTHR21021] GAF/PUTATIVE CYTOSKELETAL PROTEIN; [PF01590] GAF domain67.410.6201
44 Mapoly0003s0079 -68.330.6976
45 Mapoly0088s0028 [PTHR13675] FAMILY NOT NAMED; [PF05347] Complex 1 protein (LYR family)70.140.6538
46 Mapoly0043s0001 [GO:0016020] membrane; [KOG4267] Predicted membrane protein; [PTHR12668] TRANSMEMBRANE PROTEIN 14, 15; [PF03647] Transmembrane proteins 14C70.960.6717
47 Mapoly0009s0146 -73.440.6523
48 Mapoly0015s0174 [KOG4559] Uncharacterized conserved protein; [PF10046] Biogenesis of lysosome-related organelles complex-1 subunit 273.480.6744
49 Mapoly0042s0066 [PF09713] Plant protein 1589 of unknown function (A_thal_3526); [PTHR31871] FAMILY NOT NAMED75.500.6389
50 Mapoly0080s0013 [GO:0003677] DNA binding; [PTHR10840] PROGRAMMED CELL DEATH PROTEIN 5; [KOG3431] Apoptosis-related protein/predicted DNA-binding protein; [PF01984] Double-stranded DNA-binding domain76.160.7079
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