Guide Gene

Gene ID
Mapoly0025s0099
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K03120] transcription initiation factor TFIID TATA-box-binding protein; [GO:0003677] DNA binding; [GO:0006352] DNA-dependent transcription, initiation; [PF00352] Transcription factor TFIID (or TATA-binding protein, TBP); [KOG3302] TATA-box binding protein (TBP), component of TFIID and TFIIIB; [PTHR10126] TATA-BOX BINDING PROTEIN

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0025s0099 [K03120] transcription initiation factor TFIID TATA-box-binding protein; [GO:0003677] DNA binding; [GO:0006352] DNA-dependent transcription, initiation; [PF00352] Transcription factor TFIID (or TATA-binding protein, TBP); [KOG3302] TATA-box binding protein (TBP), component of TFIID and TFIIIB; [PTHR10126] TATA-BOX BINDING PROTEIN 0.00 1.0000
1 Mapoly0075s0018 [PF04419] 4F5 protein family; [PTHR13596] SMALL EDRK-RICH FACTOR 14.000.8550
2 Mapoly0016s0129 [PF04419] 4F5 protein family; [PF12907] Zinc-binding4.900.8420
3 Mapoly0043s0038 [GO:0005783] endoplasmic reticulum; [KOG3491] Predicted membrane protein; [PF06624] Ribosome associated membrane protein RAMP4; [PTHR15601:SF0] SUBFAMILY NOT NAMED; [PTHR15601] STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN (SERP1/RAMP4)5.480.8417
4 Mapoly0022s0084 [PTHR31149] FAMILY NOT NAMED; [PF06522] NADH-ubiquinone reductase complex 1 MLRQ subunit6.000.8502
5 Mapoly0022s0036 [PF03937] Flavinator of succinate dehydrogenase; [PTHR12469] PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL; [PTHR12469:SF2] gb def: Hypothetical protein 12F11.24010.490.8307
6 Mapoly0091s0070 [PF09072] Translation machinery associated TMA711.830.8381
7 Mapoly0080s0010 [PF06592] Protein of unknown function (DUF1138)13.040.8509
8 Mapoly0148s0019 [PTHR14233] DUF914-RELATED; [GO:0016021] integral to membrane; [PTHR14233:SF4] SUBFAMILY NOT NAMED; [GO:0006810] transport; [PF06027] Eukaryotic protein of unknown function (DUF914); [KOG2766] Predicted membrane protein15.490.8197
9 Mapoly0007s0078 [GO:0016020] membrane; [PTHR12309] SEC61 GAMMA SUBUNIT; [PF00584] SecE/Sec61-gamma subunits of protein translocation complex; [GO:0006605] protein targeting; [KOG3498] Preprotein translocase, gamma subunit; [GO:0006886] intracellular protein transport; [K07342] protein transport protein SEC61 subunit gamma and related proteins18.970.8398
10 Mapoly0013s0177 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [K07942] ADP-ribosylation factor-like 1; [PF00025] ADP-ribosylation factor family; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding21.400.7107
11 Mapoly0044s0040 -23.040.8362
12 Mapoly0004s0084 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [PTHR10168] GLUTAREDOXIN; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [K03676] glutaredoxin 323.870.8223
13 Mapoly0005s0122 [PTHR23056] CALCINEURIN B; [K06268] protein phosphatase 3, regulatory subunit; [PF13499] EF-hand domain pair; [KOG0034] Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein; [GO:0005509] calcium ion binding24.250.8151
14 Mapoly0150s0018 [PTHR21236] GOLGI MEMBRANE PROTEIN YIP1; [KOG3103] Rab GTPase interacting factor, Golgi membrane protein; [PTHR21236:SF2] GOLGI MEMBRANE PROTEIN SB140 (YIP1B)26.460.7976
15 Mapoly0040s0074 [PTHR20934:SF0] SUBFAMILY NOT NAMED; [PF05129] Transcription elongation factor Elf1 like; [KOG3214] Uncharacterized Zn ribbon-containing protein; [PTHR20934] UNCHARACTERIZED27.280.8364
16 Mapoly0008s0043 [KOG0005] Ubiquitin-like protein; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN30.170.8068
17 Mapoly0153s0010 [PTHR19359] CYTOCHROME B5; [GO:0020037] heme binding; [KOG0537] Cytochrome b5; [PF00173] Cytochrome b5-like Heme/Steroid binding domain30.400.8280
18 Mapoly0006s0223 [PF01987] Mitochondrial biogenesis AIM24; [PTHR31801] FAMILY NOT NAMED30.820.8181
19 Mapoly0020s0108 [PTHR12022] UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN; [K00417] ubiquinol-cytochrome c reductase subunit 7 [EC:1.10.2.2]; [KOG3440] Ubiquinol cytochrome c reductase, subunit QCR7; [PF02271] Ubiquinol-cytochrome C reductase complex 14kD subunit; [GO:0006122] mitochondrial electron transport, ubiquinol to cytochrome c; [GO:0005750] mitochondrial respiratory chain complex III; [PTHR12022:SF0] SUBFAMILY NOT NAMED; [1.10.2.2] Ubiquinol--cytochrome-c reductase.36.990.8267
20 Mapoly0040s0013 [PTHR12226:SF2] SUBFAMILY NOT NAMED; [K09660] mannose-P-dolichol utilization defect 1; [PTHR12226] MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 (LEC35)-RELATED; [KOG3211] Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization; [PF04193] PQ loop repeat37.420.8231
21 Mapoly0003s0100 [PF09430] Protein of unknown function (DUF2012); [KOG3306] Predicted membrane protein; [PTHR13605] UNCHARACTERIZED38.110.8004
22 Mapoly0037s0101 [PTHR31126:SF0] SUBFAMILY NOT NAMED; [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED39.120.7999
23 Mapoly0179s0026 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process41.440.8197
24 Mapoly0160s0016 -41.890.6674
25 Mapoly0081s0075 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED44.500.8114
26 Mapoly0081s0039 [K12162] ubiquitin-fold modifier 1; [PTHR15825] FAMILY NOT NAMED; [KOG3483] Uncharacterized conserved protein; [PTHR15825:SF0] SUBFAMILY NOT NAMED; [PF03671] Ubiquitin fold modifier 1 protein44.700.8064
27 Mapoly0001s0492 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [5.2.1.8] Peptidylprolyl isomerase.; [KOG0880] Peptidyl-prolyl cis-trans isomerase44.740.8243
28 Mapoly0048s0066 [GO:0003677] DNA binding; [2.5.1.18] Glutathione transferase.; [5.2.1.2] Maleylacetoacetate isomerase.; [GO:0005515] protein binding; [K00799] glutathione S-transferase [EC:2.5.1.18]; [PF00043] Glutathione S-transferase, C-terminal domain; [PF13417] Glutathione S-transferase, N-terminal domain; [PF02892] BED zinc finger; [K01800] maleylacetoacetate isomerase [EC:5.2.1.2]; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING; [KOG0868] Glutathione S-transferase45.830.7452
29 Mapoly0057s0081 [PTHR12174] SIGNAL PEPTIDE PEPTIDASE; [GO:0016021] integral to membrane; [PF04258] Signal peptide peptidase; [KOG2443] Uncharacterized conserved protein; [GO:0004190] aspartic-type endopeptidase activity; [3.4.23.-] Aspartic endopeptidases.; [K09595] minor histocompatibility antigen H13 [EC:3.4.23.-]46.570.7039
30 Mapoly0050s0076 -47.230.7624
31 Mapoly0133s0026 -47.560.7787
32 Mapoly0009s0144 -50.200.7311
33 Mapoly0036s0118 [KOG1315] Predicted DHHC-type Zn-finger protein; [GO:0008270] zinc ion binding; [PF01529] DHHC palmitoyltransferase; [PTHR22883] ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN50.200.7766
34 Mapoly0041s0112 -51.430.8114
35 Mapoly0028s0076 [GO:0016021] integral to membrane; [KOG1688] Golgi proteins involved in ER retention (RER); [PTHR10743] PROTEIN RER1; [PF03248] Rer1 family51.960.7953
36 Mapoly0126s0022 [GO:0016021] integral to membrane; [PTHR13019] UNCHARACTERIZED; [KOG3195] Uncharacterized membrane protein NPD008/CGI-148; [PF05832] Eukaryotic protein of unknown function (DUF846)52.820.7630
37 Mapoly0070s0038 [KOG4281] Uncharacterized conserved protein; [PTHR22966:SF0] SUBFAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [GO:0047800] cysteamine dioxygenase activity; [1.13.11.19] Cysteamine dioxygenase.; [PF07847] Protein of unknown function (DUF1637); [PTHR22966] UNCHARACTERIZED; [K10712] cysteamine dioxygenase [EC:1.13.11.19]54.680.7484
38 Mapoly0036s0032 [PF10890] Protein of unknown function (DUF2741); [GO:0022900] electron transport chain; [GO:0005743] mitochondrial inner membrane; [GO:0070469] respiratory chain57.240.8062
39 Mapoly0153s0035 [PF01381] Helix-turn-helix; [GO:0043565] sequence-specific DNA binding; [K03627] putative transcription factor; [KOG3398] Transcription factor MBF1; [PTHR10245] ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1); [PF08523] Multiprotein bridging factor 158.020.8191
40 Mapoly0578s0001 -58.250.6955
41 Mapoly0005s0214 -58.970.7940
42 Mapoly0106s0019 [K06689] ubiquitin-conjugating enzyme E2 D/E [EC:6.3.2.19]; [GO:0016881] acid-amino acid ligase activity; [PTHR24068] FAMILY NOT NAMED; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0417] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme59.130.7383
43 Mapoly0016s0064 [PTHR21385:SF0] SUBFAMILY NOT NAMED; [PTHR21385] ZINC FINGER PROTEIN-RELATED60.560.7225
44 Mapoly0043s0104 [1.9.3.1] Cytochrome-c oxidase.; [KOG3469] Cytochrome c oxidase, subunit VIa/COX13; [K02266] cytochrome c oxidase subunit VIa [EC:1.9.3.1]; [GO:0004129] cytochrome-c oxidase activity; [PF02046] Cytochrome c oxidase subunit VIa; [GO:0005743] mitochondrial inner membrane; [PTHR11504] CYTOCHROME C OXIDASE POLYPEPTIDE VIA; [GO:0005751] mitochondrial respiratory chain complex IV61.190.8108
45 Mapoly0074s0034 [PTHR12980:SF0] SUBFAMILY NOT NAMED; [PTHR12980] UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX, SUBUNIT X; [GO:0006122] mitochondrial electron transport, ubiquinol to cytochrome c; [GO:0005740] mitochondrial envelope; [K00419] ubiquinol-cytochrome c reductase subunit 9 [EC:1.10.2.2]; [GO:0005750] mitochondrial respiratory chain complex III; [1.10.2.2] Ubiquinol--cytochrome-c reductase.; [PF05365] Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; [KOG3494] Ubiquinol cytochrome c oxidoreductase, subunit QCR961.640.8055
46 Mapoly0088s0021 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006289] nucleotide-excision repair; [K10845] TFIIH basal transcription factor complex TTD-A subunit; [PF06331] Transcription factor TFIIH complex subunit Tfb5; [KOG3451] Uncharacterized conserved protein; [GO:0000439] core TFIIH complex62.100.7188
47 Mapoly0127s0012 [PTHR13557:SF1] gb def: hypothetical protein xp_167260 [homo sapiens]; [PTHR13557] UNCHARACTERIZED62.450.8073
48 Mapoly0039s0072 -62.480.7782
49 Mapoly0010s0009 [PTHR12403] MBP-1 INTERACTING PROTEIN-2A; [PF04628] Sedlin, N-terminal conserved region; [GO:0005622] intracellular; [KOG3444] Uncharacterized conserved protein; [GO:0006888] ER to Golgi vesicle-mediated transport62.530.7876
50 Mapoly0005s0055 [GO:0016020] membrane; [PF04893] Yip1 domain; [KOG3114] Uncharacterized conserved protein; [PTHR12822] UNCHARACTERIZED62.930.7614
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