Guide Gene

Gene ID
Mapoly0156s0011
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0417] Ubiquitin-protein ligase; [K10581] ubiquitin-conjugating enzyme E2 O [EC:6.3.2.19]; [PF00179] Ubiquitin-conjugating enzyme

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0156s0011 [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0417] Ubiquitin-protein ligase; [K10581] ubiquitin-conjugating enzyme E2 O [EC:6.3.2.19]; [PF00179] Ubiquitin-conjugating enzyme 0.00 1.0000
1 Mapoly0011s0120 [PTHR23323] VACUOLAR MEMBRANE PROTEIN RELATED; [PF00637] Region in Clathrin and VPS; [KOG2034] Vacuolar sorting protein PEP3/VPS18; [GO:0016192] vesicle-mediated transport; [PF05131] Pep3/Vps18/deep orange family; [PTHR23323:SF26] SUBFAMILY NOT NAMED; [GO:0006886] intracellular protein transport1.000.8169
2 Mapoly0007s0195 [GO:0006904] vesicle docking involved in exocytosis; [GO:0016192] vesicle-mediated transport; [PTHR11679] VESICLE PROTEIN SORTING-ASSOCIATED; [KOG1301] Vesicle trafficking protein Sly1 (Sec1 family); [PTHR11679:SF2] SLY1-RELATED; [PF00995] Sec1 family5.290.7341
3 Mapoly0046s0118 [PF00395] S-layer homology domain6.000.7020
4 Mapoly0056s0097 [GO:0005524] ATP binding; [K01103] 6-phosphofructo-2-kinase / fructose-2,6-bisphosphatase [EC:2.7.1.105 3.1.3.46]; [KOG0234] Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase; [PF00686] Starch binding domain; [GO:0006000] fructose metabolic process; [PTHR10606] 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE; [GO:0003824] catalytic activity; [3.1.3.46] Fructose-2,6-bisphosphate 2-phosphatase.; [GO:0003873] 6-phosphofructo-2-kinase activity; [PF01591] 6-phosphofructo-2-kinase; [GO:0006003] fructose 2,6-bisphosphate metabolic process; [PF00300] Histidine phosphatase superfamily (branch 1); [2.7.1.105] 6-phosphofructo-2-kinase.8.120.6332
5 Mapoly0007s0083 -8.830.7030
6 Mapoly0125s0045 [PF05664] Protein of unknown function (DUF810); [PTHR31280] FAMILY NOT NAMED12.490.6890
7 Mapoly0038s0048 [GO:0005737] cytoplasm; [PF08597] Translation initiation factor eIF3 subunit; [GO:0003743] translation initiation factor activity; [K03245] translation initiation factor eIF-3 subunit 1; [PTHR21681] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 1; [GO:0005852] eukaryotic translation initiation factor 3 complex; [KOG4813] Translation initiation factor eIF3, p35 subunit13.490.6889
8 Mapoly0039s0008 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PTHR11702:SF26] GTP-BINDING PROTEIN-RELATED; [KOG1486] GTP-binding protein DRG2 (ODN superfamily); [PF02824] TGS domain; [GO:0005525] GTP binding14.140.6890
9 Mapoly0075s0069 [GO:0030130] clathrin coat of trans-Golgi network vesicle; [GO:0016192] vesicle-mediated transport; [PTHR10639] CLATHRIN LIGHT CHAIN; [PF01086] Clathrin light chain; [GO:0006886] intracellular protein transport; [GO:0030132] clathrin coat of coated pit; [GO:0005198] structural molecule activity16.430.6780
10 Mapoly0022s0045 [PTHR10121:SF0] COATOMER SUBUNIT DELTA; [GO:0016192] vesicle-mediated transport; [GO:0005515] protein binding; [GO:0030126] COPI vesicle coat; [PF00928] Adaptor complexes medium subunit family; [KOG2635] Medium subunit of clathrin adaptor complex; [GO:0006890] retrograde vesicle-mediated transport, Golgi to ER; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [PTHR10121] COATOMER SUBUNIT DELTA16.490.6887
11 Mapoly0031s0115 [PF00569] Zinc finger, ZZ type; [GO:0008270] zinc ion binding; [KOG1776] Zn-binding protein Push; [PF13764] E3 ubiquitin-protein ligase UBR4; [PF02207] Putative zinc finger in N-recognin (UBR box); [6.3.2.19] Ubiquitin--protein ligase.; [K10691] E3 ubiquitin-protein ligase UBR4 [EC:6.3.2.19]; [GO:0004842] ubiquitin-protein ligase activity; [PTHR21725:SF1] gb def: Hypothetical protein C44E4.7; [PTHR21725] PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 60016.970.6816
12 Mapoly0058s0047 [PF00091] Tubulin/FtsZ family, GTPase domain; [PTHR23084] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED; [PF02493] MORN repeat19.750.6406
13 Mapoly0003s0204 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PTHR24031:SF0] SUBFAMILY NOT NAMED; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding23.070.6573
14 Mapoly0100s0024 [KOG1763] Uncharacterized conserved protein, contains CCCH-type Zn-finger; [PTHR12681] ZINC FINGER-CONTAINING PROTEIN P48ZNF23.240.6528
15 Mapoly0078s0045 [KOG3534] p53 inducible protein PIR121; [PF05994] Cytoplasmic Fragile-X interacting family; [K05749] cytoplasmic FMR1 interacting protein; [PTHR12195:SF0] SUBFAMILY NOT NAMED; [PTHR12195] P53 INDUCIBLE PROTEIN-RELATED24.190.6590
16 Mapoly0078s0021 [PTHR23153] UBX-RELATED24.740.6607
17 Mapoly0009s0021 [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [KOG1984] Vesicle coat complex COPII, subunit SFB3; [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [K14007] protein transport protein SEC24; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport; [PF00626] Gelsolin repeat26.320.6668
18 Mapoly0121s0003 [GO:0006904] vesicle docking involved in exocytosis; [GO:0016192] vesicle-mediated transport; [PTHR11679] VESICLE PROTEIN SORTING-ASSOCIATED; [KOG1300] Vesicle trafficking protein Sec1; [PF00995] Sec1 family29.150.6056
19 Mapoly0037s0140 [KOG0714] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24077] FAMILY NOT NAMED29.950.6437
20 Mapoly0199s0004 [KOG1603] Copper chaperone; [GO:0030001] metal ion transport; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding31.750.6371
21 Mapoly0019s0073 [GO:0008565] protein transporter activity; [PTHR23316:SF0] SUBFAMILY NOT NAMED; [PF01749] Importin beta binding domain; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005737] cytoplasm; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha; [GO:0005634] nucleus; [PTHR23316] IMPORTIN ALPHA; [GO:0006606] protein import into nucleus37.950.6428
22 Mapoly0224s0007 [PTHR12456] TOPOISOMERASE 1-BINDING RING FINGER-RELATED; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding38.460.6509
23 Mapoly0055s0021 -39.890.6254
24 Mapoly0107s0027 [PTHR10648] SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT; [K03456] protein phosphatase 2 (formerly 2A), regulatory subunit A; [KOG0211] Protein phosphatase 2A regulatory subunit A and related proteins; [PF13646] HEAT repeats40.400.6327
25 Mapoly0016s0143 [KOG3783] Uncharacterized conserved protein; [PTHR31859] FAMILY NOT NAMED; [PF10300] Protein of unknown function (DUF3808)42.850.5570
26 Mapoly0034s0016 [KOG1439] RAB proteins geranylgeranyltransferase component A (RAB escort protein); [PTHR11787] RAB GDP-DISSOCIATION INHIBITOR; [PF00996] GDP dissociation inhibitor44.190.6463
27 Mapoly0153s0017 [PTHR12860] SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN; [KOG2460] Signal recognition particle, subunit Srp68; [K03107] signal recognition particle subunit SRP6846.670.6445
28 Mapoly0070s0077 [PTHR21551] TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1; [PTHR21551:SF1] gb def: ENSANGP00000010369 (Fragment); [K12617] DNA topoisomerase 2-associated protein PAT150.650.6110
29 Mapoly0012s0024 -50.750.6521
30 Mapoly0084s0045 [PF07719] Tetratricopeptide repeat; [KOG1211] Amidases; [PF13414] TPR repeat; [PTHR11895] AMIDASE; [GO:0016884] carbon-nitrogen ligase activity, with glutamine as amido-N-donor; [PTHR11895:SF6] AMIDASE; [PF01425] Amidase51.210.6484
31 Mapoly0031s0145 [PF00183] Hsp90 protein; [GO:0005524] ATP binding; [GO:0006950] response to stress; [KOG0020] Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family; [GO:0006457] protein folding; [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PTHR11528] HEAT SHOCK PROTEIN 90; [GO:0051082] unfolded protein binding51.260.6262
32 Mapoly0012s0193 [PTHR31365] FAMILY NOT NAMED55.390.6046
33 Mapoly0151s0023 [GO:0004379] glycylpeptide N-tetradecanoyltransferase activity; [KOG2779] N-myristoyl transferase; [K00671] glycylpeptide N-tetradecanoyltransferase [EC:2.3.1.97]; [GO:0006499] N-terminal protein myristoylation; [PF02799] Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; [2.3.1.97] Glycylpeptide N-tetradecanoyltransferase.; [PF01233] Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; [PTHR11377] N-MYRISTOYL TRANSFERASE55.860.5933
34 Mapoly0119s0035 -57.710.6501
35 Mapoly0130s0022 [GO:0008565] protein transporter activity; [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [GO:0015031] protein transport; [PTHR22780:SF5] ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA SUBUNIT (GAMMA-ADAPTIN); [PF02883] Adaptin C-terminal domain; [KOG1062] Vesicle coat complex AP-1, gamma subunit; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [K12391] AP-1 complex subunit gamma-1; [GO:0005794] Golgi apparatus59.020.6173
36 Mapoly0081s0065 [GO:0016020] membrane; [PTHR11119] XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG1292] Xanthine/uracil transporters; [GO:0005215] transporter activity; [PF00860] Permease family59.570.6212
37 Mapoly0035s0045 [GO:0005524] ATP binding; [KOG0332] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K01529] dynamin GTPase [EC:3.6.5.5]; [3.6.1.-] In phosphorous-containing anhydrides.60.450.6359
38 Mapoly0024s0081 [KOG0278] Serine/threonine kinase receptor-associated protein; [GO:0005515] protein binding; [PTHR19877] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat62.160.5854
39 Mapoly0022s0120 [PTHR23323] VACUOLAR MEMBRANE PROTEIN RELATED; [PF00637] Region in Clathrin and VPS; [PF12451] Vacuolar protein sorting protein 11 C terminal; [GO:0016192] vesicle-mediated transport; [GO:0006886] intracellular protein transport; [PTHR23323:SF24] VACUOLAR MEMBRANE PROTEIN PEP5, 11; [KOG2114] Vacuolar assembly/sorting protein PEP5/VPS1162.490.6034
40 Mapoly0072s0011 [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [KOG1077] Vesicle coat complex AP-2, alpha subunit; [PF02883] Adaptin C-terminal domain; [PF02296] Alpha adaptin AP2, C-terminal domain; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [PTHR22780:SF4] ADAPTER-RELATED PROTEIN COMPLEX 2 ALPHA 1 SUBUNIT (ALPHA-ADAPTIN A); [K11824] AP-2 complex subunit alpha64.270.6387
41 Mapoly0006s0149 [KOG4732] Uncharacterized conserved protein; [PTHR21483] FAMILY NOT NAMED; [PF08620] RPAP1-like, C-terminal; [PF08621] RPAP1-like, N-terminal64.450.5869
42 Mapoly0014s0155 [PF08321] PPP5 TPR repeat region; [GO:0005737] cytoplasm; [PTHR11668] SERINE/THREONINE PROTEIN PHOSPHATASE; [PF00149] Calcineurin-like phosphoesterase; [GO:0005515] protein binding; [GO:0016787] hydrolase activity; [PF13414] TPR repeat; [GO:0004721] phosphoprotein phosphatase activity; [GO:0006470] protein dephosphorylation; [GO:0005634] nucleus; [PTHR11668:SF12] PROTEIN PHOSPHATASE-5; [PF00515] Tetratricopeptide repeat; [KOG0376] Serine-threonine phosphatase 2A, catalytic subunit; [3.1.3.16] Phosphoprotein phosphatase.; [K04460] protein phosphatase 5 [EC:3.1.3.16]69.430.6471
43 Mapoly0040s0140 [K14500] BR-signaling kinase [EC:2.7.11.1]; [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE69.740.6344
44 Mapoly0012s0132 -70.200.5681
45 Mapoly0079s0059 [PF00350] Dynamin family; [PTHR11566] DYNAMIN; [PTHR11566:SF12] DYNAMIN; [GO:0003924] GTPase activity; [GO:0005525] GTP binding71.110.5894
46 Mapoly0154s0021 [GO:0003723] RNA binding; [PTHR23253] EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; [PF02854] MIF4G domain; [GO:0005515] protein binding; [KOG0401] Translation initiation factor 4F, ribosome/mRNA-bridging subunit (eIF-4G); [K03260] translation initiation factor eIF-4F; [PF02847] MA3 domain71.130.6109
47 Mapoly0083s0062 [K09553] stress-induced-phosphoprotein 1; [GO:0005515] protein binding; [PF13414] TPR repeat; [KOG0548] Molecular co-chaperone STI1; [PF00515] Tetratricopeptide repeat; [PTHR22904] TPR REPEAT CONTAINING PROTEIN71.970.6270
48 Mapoly0127s0015 [PTHR13214] FAMILY NOT NAMED; [GO:0008270] zinc ion binding; [PF06524] NOA36 protein; [GO:0005634] nucleus; [PTHR13214:SF1] gb def: similar to nucleolar cysteine-rich protein, zinc finger autoantigen 330 mus mus73.250.5367
49 Mapoly0104s0033 [GO:0005524] ATP binding; [3.6.4.6] Vesicle-fusing ATPase.; [PF02359] Cell division protein 48 (CDC48), N-terminal domain; [PF02933] Cell division protein 48 (CDC48), domain 2; [K06027] vesicle-fusing ATPase [EC:3.6.4.6]; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0741] AAA+-type ATPase; [PTHR23078] VESICULAR-FUSION PROTEIN NSF; [PTHR23078:SF3] VESICULAR-FUSION PROTEIN NSF74.510.5670
50 Mapoly0030s0078 [GO:0016597] amino acid binding; [PF01842] ACT domain; [GO:0006099] tricarboxylic acid cycle; [PTHR30523] PHOSPHOENOLPYRUVATE CARBOXYLASE; [PF00311] Phosphoenolpyruvate carboxylase; [GO:0008152] metabolic process; [GO:0008964] phosphoenolpyruvate carboxylase activity; [GO:0015977] carbon fixation76.920.6052
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