Guide Gene

Gene ID
Mapoly0125s0021
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003677] DNA binding; [GO:0006260] DNA replication; [PTHR23273:SF0] SUBFAMILY NOT NAMED; [GO:0008270] zinc ion binding; [PF04057] Replication factor-A protein 1, N-terminal domain; [PF00098] Zinc knuckle; [GO:0005634] nucleus; [PF08646] Replication factor-A C terminal domain; [GO:0003676] nucleic acid binding; [K07466] replication factor A1; [PTHR23273] REPLICATION FACTOR A 1, RFA1; [PF01336] OB-fold nucleic acid binding domain

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0406 [GO:0000922] spindle pole; [KOG2000] Gamma-tubulin complex, DGRIP91/SPC98 component; [PF04130] Spc97 / Spc98 family; [GO:0005856] cytoskeleton; [GO:0005815] microtubule organizing center; [GO:0000226] microtubule cytoskeleton organization; [PTHR19302] GAMMA TUBULIN COMPLEX PROTEIN; [GO:0007020] microtubule nucleation; [PTHR19302:SF14] GAMMA-TUBULIN COMPLEX COMPONENT 3 (GCP-3)
Mapoly0004s0129 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [PF12436] ICP0-binding domain of Ubiquitin-specific protease 7; [PF00917] MATH domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0005515] protein binding; [KOG1863] Ubiquitin carboxyl-terminal hydrolase; [PF14533] Ubiquitin-specific protease C-terminal; [PTHR24619] FAMILY NOT NAMED; [K11838] ubiquitin carboxyl-terminal hydrolase 7 [EC:3.1.2.15]
Mapoly0005s0161 [GO:0003677] DNA binding; [PTHR13451:SF0] SUBFAMILY NOT NAMED; [3.1.22.-] Endodeoxyribonucleases producing other than 5'-phosphomonoesters.; [K08991] crossover junction endonuclease MUS81 [EC:3.1.22.-]; [PTHR13451] CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81; [GO:0004518] nuclease activity; [PF02732] ERCC4 domain
Mapoly0009s0019 [KOG1898] Splicing factor 3b, subunit 3; [PTHR10644:SF1] SPLICING FACTOR 3B SUBUNIT 3 (SPLICEOSOME-ASSOCIATED PROTEIN 130)(SAP 130); [PF10433] Mono-functional DNA-alkylating methyl methanesulfonate N-term; [PF03178] CPSF A subunit region; [GO:0005634] nucleus; [PTHR10644] DNA REPAIR/RNA PROCESSING CPSF FAMILY; [GO:0003676] nucleic acid binding; [K12830] splicing factor 3B subunit 3
Mapoly0019s0008 [GO:0003723] RNA binding; [PF10596] U6-snRNA interacting domain of PrP8; [PF08083] PROCN (NUC071) domain; [GO:0005515] protein binding; [GO:0005681] spliceosomal complex; [PTHR11140] PRE-MRNA SPLICING FACTOR PRP8; [PTHR11140:SF0] SUBFAMILY NOT NAMED; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [GO:0030623] U5 snRNA binding; [PF10597] U5-snRNA binding site 2 of PrP8; [KOG1795] U5 snRNP spliceosome subunit; [GO:0000398] mRNA splicing, via spliceosome; [PF12134] PRP8 domain IV core; [PF10598] RNA recognition motif of the spliceosomal PrP8; [K12856] pre-mRNA-processing factor 8; [GO:0017070] U6 snRNA binding; [PF08082] PRO8NT (NUC069), PrP8 N-terminal domain; [PF08084] PROCT (NUC072) domain
Mapoly0026s0003 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [K12818] ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]; [3.6.4.13] RNA helicase.; [PF00575] S1 RNA binding domain; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold
Mapoly0026s0077 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [PF02259] FAT domain; [GO:0005515] protein binding; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF08064] UME (NUC010) domain; [PF00454] Phosphatidylinositol 3- and 4-kinase; [K06640] ataxia telangiectasia and Rad3 related [EC:2.7.11.1]; [GO:0004674] protein serine/threonine kinase activity; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED; [KOG0890] Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination
Mapoly0034s0031 [GO:0007094] mitotic spindle assembly checkpoint; [K06638] mitotic spindle assembly checkpoint protein MAD1; [KOG4593] Mitotic checkpoint protein MAD1; [PTHR23168] MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 (MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1); [PF05557] Mitotic checkpoint protein; [PTHR23168:SF0] SUBFAMILY NOT NAMED
Mapoly0035s0137 [GO:0005643] nuclear pore; [PTHR10350:SF6] NUCLEOPORIN 155; [PF03177] Non-repetitive/WGA-negative nucleoporin C-terminal; [K14312] nuclear pore complex protein Nup155; [KOG1900] Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170); [GO:0006913] nucleocytoplasmic transport; [PF08801] Nup133 N terminal like; [GO:0017056] structural constituent of nuclear pore; [PTHR10350] NUCLEAR PORE COMPLEX PROTEIN NUP155
Mapoly0042s0049 -
Mapoly0043s0081 [GO:0005524] ATP binding; [PF02889] Sec63 Brl domain; [PTHR11752] HELICASE SKI2W; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PTHR11752:SF7] U520; [PF00271] Helicase conserved C-terminal domain; [KOG0951] RNA helicase BRR2, DEAD-box superfamily; [GO:0003676] nucleic acid binding; [K12854] pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13]
Mapoly0051s0028 [GO:0003723] RNA binding; [PTHR23253] EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; [PF02854] MIF4G domain; [GO:0005515] protein binding; [PF02020] eIF4-gamma/eIF5/eIF2-epsilon; [KOG2992] Nucleolar GTPase/ATPase p130; [K03260] translation initiation factor eIF-4F; [PF02847] MA3 domain
Mapoly0056s0030 [KOG1040] Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit); [PTHR12357] YTH (YT521-B HOMOLOGY) DOMAIN-CONTAINING; [PF04146] YT521-B-like domain; [PTHR12357:SF3] SPLICING FACTOR YT521-B
Mapoly0064s0056 [GO:0003677] DNA binding; [PF00628] PHD-finger; [GO:0005515] protein binding; [PF01429] Methyl-CpG binding domain; [GO:0005634] nucleus; [PF15612] WSTF, HB1, Itc1p, MBD9 motif 1; [PTHR14140] E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED
Mapoly0066s0020 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family
Mapoly0101s0045 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [GO:0005515] protein binding; [K08873] PI-3-kinase-related kinase SMG-1; [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED
Mapoly0108s0040 [PF08167] rRNA processing/ribosome biogenesis
Mapoly0121s0051 [KOG1003] Actin filament-coating protein tropomyosin
Mapoly0125s0021 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [PTHR23273:SF0] SUBFAMILY NOT NAMED; [GO:0008270] zinc ion binding; [PF04057] Replication factor-A protein 1, N-terminal domain; [PF00098] Zinc knuckle; [GO:0005634] nucleus; [PF08646] Replication factor-A C terminal domain; [GO:0003676] nucleic acid binding; [K07466] replication factor A1; [PTHR23273] REPLICATION FACTOR A 1, RFA1; [PF01336] OB-fold nucleic acid binding domain
Mapoly0136s0010 [K03028] 26S proteasome regulatory subunit N1; [GO:0000502] proteasome complex; [PTHR10943] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT; [KOG2005] 26S proteasome regulatory complex, subunit RPN1/PSMD2; [PTHR10943:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 (26S PROTEASOME REGULATORY SUBUNIT RPN1); [GO:0030234] enzyme regulator activity; [PF01851] Proteasome/cyclosome repeat; [GO:0042176] regulation of protein catabolic process
Mapoly0138s0046 [KOG1803] DNA helicase; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain