Guide Gene

Gene ID
Mapoly0113s0011
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K03165] DNA topoisomerase III [EC:5.99.1.2]; [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PF06839] GRF zinc finger; [PF01751] Toprim domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0006265] DNA topological change; [KOG1956] DNA topoisomerase III alpha; [PF01396] Topoisomerase DNA binding C4 zinc finger; [GO:0005694] chromosome; [GO:0003916] DNA topoisomerase activity; [GO:0003676] nucleic acid binding; [PTHR11390:SF23] DNA TOPOISOMERASE I-RELATED; [PTHR11390] PROKARYOTIC DNA TOPOISOMERASE; [5.99.1.2] DNA topoisomerase.; [PF01131] DNA topoisomerase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0113s0011 [K03165] DNA topoisomerase III [EC:5.99.1.2]; [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PF06839] GRF zinc finger; [PF01751] Toprim domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0006265] DNA topological change; [KOG1956] DNA topoisomerase III alpha; [PF01396] Topoisomerase DNA binding C4 zinc finger; [GO:0005694] chromosome; [GO:0003916] DNA topoisomerase activity; [GO:0003676] nucleic acid binding; [PTHR11390:SF23] DNA TOPOISOMERASE I-RELATED; [PTHR11390] PROKARYOTIC DNA TOPOISOMERASE; [5.99.1.2] DNA topoisomerase.; [PF01131] DNA topoisomerase 0.00 1.0000
1 Mapoly0046s0027 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT2.000.7831
2 Mapoly0003s0245 -3.460.7943
3 Mapoly0053s0042 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PTHR18921] MYOSIN HEAVY CHAIN - RELATED6.240.7524
4 Mapoly0075s0086 -6.930.7502
5 Mapoly0065s0047 [PF13837] Myb/SANT-like DNA-binding domain15.650.7429
6 Mapoly0085s0092 [KOG0048] Transcription factor, Myb superfamily; [PF00249] Myb-like DNA-binding domain; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [GO:0003682] chromatin binding16.970.7003
7 Mapoly0058s0099 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00035] Double-stranded RNA binding motif; [KOG0920] ATP-dependent RNA helicase A; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold22.090.7362
8 Mapoly0028s0109 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [PTHR23069:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PF00439] Bromodomain; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0732] AAA+-type ATPase containing the bromodomain28.280.7473
9 Mapoly0108s0008 [PF00226] DnaJ domain; [KOG0713] Molecular chaperone (DnaJ superfamily); [PTHR24076] FAMILY NOT NAMED33.990.6338
10 Mapoly0001s0292 [KOG1913] Regucalcin gene promoter region-related protein (RGPR); [GO:0048208] COPII vesicle coating; [PF12932] Vesicle coat trafficking protein Sec16 mid-region; [PTHR13402] RGPR-RELATED; [PF12931] Sec23-binding domain of Sec1638.650.7337
11 Mapoly0096s0060 [PF15613] WSTF, HB1, Itc1p, MBD9 motif 2; [PTHR15546] FAMILY NOT NAMED; [PF10537] ATP-utilising chromatin assembly and remodelling N-terminal; [PF02791] DDT domain38.650.7439
12 Mapoly0061s0114 -40.210.6758
13 Mapoly0016s0170 [PF13513] HEAT-like repeat; [PF03810] Importin-beta N-terminal domain; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding; [PTHR10527] IMPORTIN BETA; [KOG1241] Karyopherin (importin) beta 1; [K14293] importin subunit beta-144.010.7199
14 Mapoly0037s0064 [PTHR23231] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PTHR23231:SF4] SUBFAMILY NOT NAMED44.500.7217
15 Mapoly0080s0066 [PTHR11804] PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED; [GO:0004222] metalloendopeptidase activity; [K01392] thimet oligopeptidase [EC:3.4.24.15]; [KOG2089] Metalloendopeptidase family - saccharolysin & thimet oligopeptidase; [PF01432] Peptidase family M3; [GO:0006508] proteolysis; [3.4.24.15] Thimet oligopeptidase.46.510.7034
16 Mapoly0100s0023 [GO:0005086] ARF guanyl-nucleotide exchange factor activity; [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [PF01369] Sec7 domain; [GO:0032012] regulation of ARF protein signal transduction; [KOG0928] Pattern-formation protein/guanine nucleotide exchange factor49.360.7176
17 Mapoly0065s0046 [PTHR15327:SF0] SUBFAMILY NOT NAMED; [PTHR15327] MICROFIBRIL-ASSOCIATED PROTEIN; [KOG1425] Microfibrillar-associated protein MFAP1; [PF06991] Splicing factor, Prp19-binding domain; [K13110] microfibrillar-associated protein 149.940.6983
18 Mapoly0029s0056 [PTHR24375] FAMILY NOT NAMED; [PF00096] Zinc finger, C2H2 type; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0046872] metal ion binding; [PF13912] C2H2-type zinc finger50.650.7125
19 Mapoly0078s0024 [PTHR14398] RNA RECOGNITION RRM/RNP DOMAIN; [PTHR14398:SF0] SUBFAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)54.500.7239
20 Mapoly0118s0012 [KOG1737] Oxysterol-binding protein; [PF15413] Pleckstrin homology domain; [PTHR10972] OXYSTEROL-BINDING PROTEIN-RELATED; [PF01237] Oxysterol-binding protein54.800.6398
21 Mapoly0020s0016 [PTHR13102:SF0] SUBFAMILY NOT NAMED; [PTHR13102] PROTEIN C14ORF21; [KOG2188] Predicted RNA-binding protein, contains Pumilio domains58.220.7272
22 Mapoly0102s0039 [GO:0005524] ATP binding; [KOG0576] Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE58.480.7040
23 Mapoly0067s0080 [PF12708] Pectate lyase superfamily protein60.080.5681
24 Mapoly0020s0160 [PTHR16017:SF0] SUBFAMILY NOT NAMED; [PTHR16017] GASTRULATION DEFECTIVE PROTEIN 1-RELATED; [GO:0005515] protein binding; [KOG0772] Uncharacterized conserved protein, contains WD40 repeat; [PF00400] WD domain, G-beta repeat61.240.6277
25 Mapoly0014s0066 [KOG2271] Nuclear pore complex component (sc Nup85); [K14304] nuclear pore complex protein Nup85; [PF07575] Nup85 Nucleoporin; [PTHR13373] FROUNT PROTEIN-RELATED62.740.6847
26 Mapoly0008s0077 [PTHR31513] FAMILY NOT NAMED64.820.7027
27 Mapoly0047s0039 [PTHR31027] FAMILY NOT NAMED64.900.6317
28 Mapoly0014s0172 -64.930.6554
29 Mapoly0043s0034 [PTHR13233] MICROSPHERULE PROTEIN 1; [GO:0005515] protein binding; [PTHR13233:SF0] SUBFAMILY NOT NAMED; [PF13325] N-terminal region of micro-spherule protein; [PF00498] FHA domain65.060.7071
30 Mapoly0065s0029 [PF13950] UDP-glucose 4-epimerase C-term subunit; [K01784] UDP-glucose 4-epimerase [EC:5.1.3.2]; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [KOG1371] UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase; [5.1.3.2] UDP-glucose 4-epimerase.; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE65.070.6209
31 Mapoly0122s0020 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF07716] Basic region leucine zipper65.180.6630
32 Mapoly0012s0190 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0003774] motor activity; [PTHR13140] MYOSIN; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PF01843] DIL domain; [GO:0005515] protein binding; [KOG0160] Myosin class V heavy chain; [PF00612] IQ calmodulin-binding motif; [PF02736] Myosin N-terminal SH3-like domain; [PF00013] KH domain; [GO:0046872] metal ion binding; [PF00063] Myosin head (motor domain); [GO:0016459] myosin complex67.080.6820
33 Mapoly0033s0141 [GO:0005515] protein binding; [PTHR14107] WD REPEAT PROTEIN; [KOG2394] WD40 protein DMR-N9; [PF00400] WD domain, G-beta repeat67.080.6518
34 Mapoly0088s0014 [PF00628] PHD-finger; [GO:0005515] protein binding69.710.6984
35 Mapoly0005s0167 [PF07035] Colon cancer-associated protein Mic1-like; [PTHR12897] COLON CANCER-ASSOCIATED PROTEIN MIC169.810.5516
36 Mapoly0033s0036 [PTHR10357] ALPHA-AMYLASE; [GO:0004556] alpha-amylase activity; [GO:0005975] carbohydrate metabolic process; [PF07821] Alpha-amylase C-terminal beta-sheet domain; [KOG0471] Alpha-amylase; [GO:0003824] catalytic activity; [GO:0043169] cation binding; [GO:0005509] calcium ion binding; [PF00128] Alpha amylase, catalytic domain71.810.6078
37 Mapoly0085s0035 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR23329] TUFTELIN-INTERACTING PROTEIN 11-RELATED; [PF07842] GC-rich sequence DNA-binding factor-like protein; [KOG2184] Tuftelin-interacting protein TIP39, contains G-patch domain; [PF01585] G-patch domain; [PF12457] Tuftelin interacting protein N terminal; [GO:0005634] nucleus; [GO:0003676] nucleic acid binding; [PTHR23329:SF1] TUFTELIN INTERACTING PROTEIN 11; [K13103] tuftelin-interacting protein 1172.770.7106
38 Mapoly0050s0061 [GO:0016020] membrane; [GO:0005245] voltage-gated calcium channel activity; [PTHR10037] VOLTAGE-GATED CATION CHANNEL (CALCIUM AND SODIUM); [PF00520] Ion transport protein; [GO:0055085] transmembrane transport; [GO:0006811] ion transport; [PTHR10037:SF92] SODIUM CHANNEL PROTEIN TYPE III ALPHA SUBUNIT-RELATED; [GO:0005216] ion channel activity73.360.6811
39 Mapoly0068s0063 -73.840.7042
40 Mapoly0097s0060 [PTHR13890:SF2] MITOCHONDRIAL RNA SPLICING PROTEIN MRS2-RELATED; [KOG2662] Magnesium transporters: CorA family; [GO:0015095] magnesium ion transmembrane transporter activity; [GO:0015693] magnesium ion transport; [PTHR13890] RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL75.460.6493
41 Mapoly0001s0085 [PTHR19852] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG0282] mRNA splicing factor; [K12816] pre-mRNA-processing factor 17; [PF00400] WD domain, G-beta repeat76.650.7002
42 Mapoly0052s0038 [KOG2280] Vacuolar assembly/sorting protein VPS16; [GO:0005737] cytoplasm; [PF04840] Vps16, C-terminal region; [PTHR12811] VACUOLAR PROTEIN SORTING VPS16; [PF04841] Vps16, N-terminal region; [GO:0006886] intracellular protein transport; [PTHR12811:SF0] SUBFAMILY NOT NAMED79.330.6944
43 Mapoly0062s0029 [KOG1982] Nuclear 5'-3' exoribonuclease-interacting protein, Rai1p; [PF08652] RAI1 like PD-(D/E)XK nuclease; [PTHR12395:SF9] SUBFAMILY NOT NAMED; [PTHR12395] DOM-3 RELATED81.170.7065
44 Mapoly0035s0058 -81.690.6547
45 Mapoly0052s0017 -83.250.6909
46 Mapoly0092s0015 [K09480] digalactosyldiacylglycerol synthase [EC:2.4.1.241]; [PF13692] Glycosyl transferases group 1; [PTHR12526] GLYCOSYLTRANSFERASE; [2.4.1.241] Digalactosyldiacylglycerol synthase.83.470.5886
47 Mapoly0085s0091 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE84.400.6997
48 Mapoly0141s0005 [GO:0031072] heat shock protein binding; [KOG0715] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24076] FAMILY NOT NAMED; [PF00684] DnaJ central domain; [GO:0051082] unfolded protein binding90.390.6078
49 Mapoly0087s0013 [K13102] DNA/RNA-binding protein KIN17; [KOG2837] Protein containing a U1-type Zn-finger and implicated in RNA splicing or processing; [PTHR12805] KIN17 (KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG); [PF10357] Domain of Kin17 curved DNA-binding protein90.830.6752
50 Mapoly0014s0006 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0752] Mitochondrial solute carrier protein91.950.5511
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