Guide Gene
- Gene ID
- Mapoly0052s0038
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [KOG2280] Vacuolar assembly/sorting protein VPS16; [GO:0005737] cytoplasm; [PF04840] Vps16, C-terminal region; [PTHR12811] VACUOLAR PROTEIN SORTING VPS16; [PF04841] Vps16, N-terminal region; [GO:0006886] intracellular protein transport; [PTHR12811:SF0] SUBFAMILY NOT NAMED
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0052s0038 [KOG2280] Vacuolar assembly/sorting protein VPS16; [GO:0005737] cytoplasm; [PF04840] Vps16, C-terminal region; [PTHR12811] VACUOLAR PROTEIN SORTING VPS16; [PF04841] Vps16, N-terminal region; [GO:0006886] intracellular protein transport; [PTHR12811:SF0] SUBFAMILY NOT NAMED 0.00 1.0000 1 Mapoly0005s0057 [GO:0016787] hydrolase activity; [KOG1386] Nucleoside phosphatase; [PTHR11782] ADENOSINE/GUANOSINE DIPHOSPHATASE; [K01510] apyrase [EC:3.6.1.5]; [3.6.1.5] Apyrase.; [PF01150] GDA1/CD39 (nucleoside phosphatase) family 1.00 0.8568 2 Mapoly0045s0043 - 6.16 0.8431 3 Mapoly0001s0292 [KOG1913] Regucalcin gene promoter region-related protein (RGPR); [GO:0048208] COPII vesicle coating; [PF12932] Vesicle coat trafficking protein Sec16 mid-region; [PTHR13402] RGPR-RELATED; [PF12931] Sec23-binding domain of Sec16 7.35 0.8371 4 Mapoly0097s0060 [PTHR13890:SF2] MITOCHONDRIAL RNA SPLICING PROTEIN MRS2-RELATED; [KOG2662] Magnesium transporters: CorA family; [GO:0015095] magnesium ion transmembrane transporter activity; [GO:0015693] magnesium ion transport; [PTHR13890] RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 8.37 0.7771 5 Mapoly0002s0327 [K01552] arsenite-transporting ATPase [EC:3.6.3.16]; [KOG0209] P-type ATPase; [GO:0000166] nucleotide binding; [GO:0016021] integral to membrane; [PF00702] haloacid dehalogenase-like hydrolase; [GO:0016887] ATPase activity; [3.6.3.-] Acting on acid anhydrides; catalyzing transmembrane movement of substances.; [GO:0006812] cation transport; [PTHR24093] FAMILY NOT NAMED; [PTHR24093:SF82] ATPASE, P-TYPE, HAD SUPERFAMILY, SUBFAMILY IC, PUTATIVE; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase 9.80 0.8238 6 Mapoly0151s0009 [PTHR23079] RNA-DEPENDENT RNA POLYMERASE; [GO:0003968] RNA-directed RNA polymerase activity; [KOG0988] RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference; [PF05183] RNA dependent RNA polymerase; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9.80 0.8010 7 Mapoly0022s0109 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0008270] zinc ion binding; [KOG1597] Transcription initiation factor TFIIB 10.25 0.8163 8 Mapoly0070s0084 [PTHR12100] SEC10; [GO:0005737] cytoplasm; [GO:0048278] vesicle docking; [PF07393] Exocyst complex component Sec10; [PTHR12100:SF0] SUBFAMILY NOT NAMED; [KOG3745] Exocyst subunit - Sec10p; [GO:0006887] exocytosis 11.00 0.8069 9 Mapoly0085s0089 [PF01545] Cation efflux family; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [K03295] cation efflux system protein, CDF family; [GO:0006812] cation transport; [PTHR11562:SF13] SUBFAMILY NOT NAMED; [GO:0008324] cation transmembrane transporter activity; [PTHR11562] CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 11.40 0.7840 10 Mapoly0188s0019 [GO:0003993] acid phosphatase activity; [PTHR31284] FAMILY NOT NAMED; [PF03767] HAD superfamily, subfamily IIIB (Acid phosphatase) 12.12 0.7639 11 Mapoly0114s0021 [KOG0446] Vacuolar sorting protein VPS1, dynamin, and related proteins; [PF02212] Dynamin GTPase effector domain; [PF00350] Dynamin family; [PTHR11566] DYNAMIN; [PF00169] PH domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding; [PF01031] Dynamin central region 13.08 0.8118 12 Mapoly0101s0011 [GO:0005524] ATP binding; [PTHR19229] ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A (ABCA); [GO:0016887] ATPase activity; [KOG0059] Lipid exporter ABCA1 and related proteins, ABC superfamily; [K05648] ATP-binding cassette, subfamily A (ABC1), member 5; [PF12698] ABC-2 family transporter protein; [PF00005] ABC transporter 13.23 0.8318 13 Mapoly0095s0004 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding 13.71 0.7645 14 Mapoly0063s0003 [PTHR10241] LETHAL(2) GIANT LARVAE PROTEIN; [GO:0016192] vesicle-mediated transport; [GO:0016021] integral to membrane; [PTHR10241:SF25] SUBFAMILY NOT NAMED; [PF00957] Synaptobrevin; [K08518] syntaxin binding protein 5 (tomosyn); [KOG1983] Tomosyn and related SNARE-interacting proteins 14.14 0.8128 15 Mapoly0035s0069 [PTHR13520:SF1] SUBFAMILY NOT NAMED; [PF04437] RINT-1 / TIP-1 family; [KOG2218] ER to golgi transport protein/RAD50-interacting protein 1; [PTHR13520] RAD50-INTERACTING PROTEIN 1 (PROTEIN RINT-1) 15.17 0.8088 16 Mapoly0084s0050 [PTHR10751] GUANYLATE BINDING PROTEIN; [PF02263] Guanylate-binding protein, N-terminal domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding 16.49 0.8334 17 Mapoly0021s0008 [PTHR12895] FAMILY NOT NAMED; [KOG2225] Proteins containing regions of low-complexity; [PF09742] Dyggve-Melchior-Clausen syndrome protein 17.66 0.8008 18 Mapoly0096s0015 [PF01734] Patatin-like phospholipase; [KOG4231] Intracellular membrane-bound Ca2+-independent phospholipase A2; [PF12799] Leucine Rich repeats (2 copies); [PTHR24185] FAMILY NOT NAMED; [GO:0006629] lipid metabolic process 21.26 0.7323 19 Mapoly0014s0172 - 21.77 0.7465 20 Mapoly0034s0010 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PTHR22753:SF1] SUBFAMILY NOT NAMED; [PTHR22753] FAMILY NOT NAMED; [PF03982] Diacylglycerol acyltransferase; [PF12697] Alpha/beta hydrolase family 21.82 0.7545 21 Mapoly0009s0222 [PTHR21506] COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6; [PF06419] Conserved oligomeric complex COG6; [GO:0006891] intra-Golgi vesicle-mediated transport; [GO:0017119] Golgi transport complex; [KOG3758] Uncharacterized conserved protein 22.05 0.7451 22 Mapoly0016s0170 [PF13513] HEAT-like repeat; [PF03810] Importin-beta N-terminal domain; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding; [PTHR10527] IMPORTIN BETA; [KOG1241] Karyopherin (importin) beta 1; [K14293] importin subunit beta-1 24.37 0.7938 23 Mapoly0053s0042 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PTHR18921] MYOSIN HEAVY CHAIN - RELATED 24.82 0.7599 24 Mapoly0059s0091 [PF03901] Alg9-like mannosyltransferase family; [KOG2515] Mannosyltransferase; [PTHR22760] GLYCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups; [K03846] alpha-1,2-mannosyltransferase [EC:2.4.1.-]; [2.4.1.-] Hexosyltransferases. 24.98 0.7139 25 Mapoly0002s0295 [PF01602] Adaptin N terminal region; [GO:0016192] vesicle-mediated transport; [PTHR11134] ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT; [PF02883] Adaptin C-terminal domain; [PF09066] Beta2-adaptin appendage, C-terminal sub-domain; [KOG1061] Vesicle coat complex AP-1/AP-2/AP-4, beta subunit; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [K12392] AP-1 complex subunit beta-1; [PTHR11134:SF3] ADAPTER-RELATED PROTEIN COMPLEX 1, BETA SUBUNIT 25.08 0.7754 26 Mapoly0040s0042 - 25.83 0.7826 27 Mapoly0007s0274 [PTHR21443] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7; [KOG4182] Uncharacterized conserved protein; [GO:0006886] intracellular protein transport; [PF10191] Golgi complex component 7 (COG7); [GO:0017119] Golgi transport complex 25.98 0.7479 28 Mapoly0050s0075 [PF01713] Smr domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 27.50 0.7574 29 Mapoly0133s0025 [PTHR15495] NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006505] GPI anchor metabolic process; [GO:0006886] intracellular protein transport; [PF07819] PGAP1-like protein; [PTHR15495:SF7] SPHINGOSINE-1-PHOSPHATE LYASE-RELATED; [KOG3724] Negative regulator of COPII vesicle formation 27.66 0.7939 30 Mapoly0082s0010 [PTHR13228] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5; [KOG2211] Predicted Golgi transport complex 1 protein; [PF10392] Golgi transport complex subunit 5; [GO:0006891] intra-Golgi vesicle-mediated transport; [PTHR13228:SF3] SUBFAMILY NOT NAMED; [GO:0017119] Golgi transport complex 28.46 0.7674 31 Mapoly0088s0067 [PTHR23054] UNCHARACTERIZED; [GO:0006810] transport; [PF02121] Phosphatidylinositol transfer protein; [PF04784] Protein of unknown function, DUF547; [GO:0005622] intracellular; [KOG3668] Phosphatidylinositol transfer protein 28.57 0.7637 32 Mapoly0167s0007 [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [GO:0015031] protein transport; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [KOG1848] Uncharacterized conserved protein 28.98 0.7823 33 Mapoly0058s0008 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 29.66 0.7334 34 Mapoly0050s0061 [GO:0016020] membrane; [GO:0005245] voltage-gated calcium channel activity; [PTHR10037] VOLTAGE-GATED CATION CHANNEL (CALCIUM AND SODIUM); [PF00520] Ion transport protein; [GO:0055085] transmembrane transport; [GO:0006811] ion transport; [PTHR10037:SF92] SODIUM CHANNEL PROTEIN TYPE III ALPHA SUBUNIT-RELATED; [GO:0005216] ion channel activity 30.03 0.7449 35 Mapoly0014s0075 [PTHR22937:SF18] OS08G0151700 PROTEIN; [KOG2930] SCF ubiquitin ligase, Rbx1 component; [GO:0005515] protein binding; [PTHR22937] RING FINGER CONTAINING PROTEIN; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding 31.75 0.7981 36 Mapoly0129s0050 [PTHR11922] GMP SYNTHASE-RELATED; [PTHR11922:SF1] ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 36.51 0.7812 37 Mapoly0031s0138 [KOG1931] Putative transmembrane protein; [PTHR13251] EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1; [PF11817] Foie gras liver health family 1; [PF12584] Trafficking protein particle complex subunit 10, TRAPPC10 37.46 0.7870 38 Mapoly0047s0091 [GO:0006904] vesicle docking involved in exocytosis; [GO:0016192] vesicle-mediated transport; [PTHR11679] VESICLE PROTEIN SORTING-ASSOCIATED; [PF00995] Sec1 family 37.63 0.7298 39 Mapoly0120s0028 [KOG2215] Exocyst complex subunit; [PF08700] Vps51/Vps67; [PTHR21426] FAMILY NOT NAMED 38.39 0.7555 40 Mapoly0132s0051 [KOG0446] Vacuolar sorting protein VPS1, dynamin, and related proteins; [PF02212] Dynamin GTPase effector domain; [PF00350] Dynamin family; [PTHR11566] DYNAMIN; [GO:0003924] GTPase activity; [GO:0005525] GTP binding; [PF01031] Dynamin central region 39.95 0.7915 41 Mapoly0001s0466 [GO:0005515] protein binding; [PTHR13950] RABCONNECTIN-RELATED; [PF12234] RAVE protein 1 C terminal; [PF00400] WD domain, G-beta repeat 40.35 0.7905 42 Mapoly0007s0201 [GO:0006506] GPI anchor biosynthetic process; [PF04987] Phosphatidylinositolglycan class N (PIG-N); [PF01663] Type I phosphodiesterase / nucleotide pyrophosphatase; [KOG2124] Glycosylphosphatidylinositol anchor synthesis protein; [PTHR12250] PHOSPHATIDYLINOSITOL GLYCAN, CLASS N; [GO:0003824] catalytic activity; [GO:0005789] endoplasmic reticulum membrane; [GO:0016740] transferase activity 44.70 0.7330 43 Mapoly0075s0059 [GO:0005524] ATP binding; [KOG0296] Angio-associated migratory cell protein (contains WD40 repeats); [PF00069] Protein kinase domain; [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF02138] Beige/BEACH domain; [PF00400] WD domain, G-beta repeat 44.90 0.7968 44 Mapoly0072s0027 [PF00168] C2 domain; [GO:0005515] protein binding 45.48 0.7011 45 Mapoly0001s0267 [GO:0071203] WASH complex; [PTHR31409:SF0] SUBFAMILY NOT NAMED; [PF14745] WASH complex subunit 7, N-terminal; [KOG3578] Uncharacterized conserved protein; [PF14746] WASH complex subunit 7, C-terminal; [PF14744] WASH complex subunit 7; [PTHR31409] FAMILY NOT NAMED 46.04 0.7611 46 Mapoly0003s0046 [GO:0016020] membrane; [PTHR12961] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2; [GO:0015031] protein transport; [KOG2307] Low density lipoprotein receptor; [GO:0007030] Golgi organization; [PF06148] COG (conserved oligomeric Golgi) complex component, COG2; [PF12022] Domain of unknown function (DUF3510) 46.43 0.7471 47 Mapoly0013s0045 - 47.24 0.7766 48 Mapoly0089s0032 [PF04765] Protein of unknown function (DUF616); [PTHR12956] ALKALINE CERAMIDASE-RELATED 47.62 0.7344 49 Mapoly0100s0023 [GO:0005086] ARF guanyl-nucleotide exchange factor activity; [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [PF01369] Sec7 domain; [GO:0032012] regulation of ARF protein signal transduction; [KOG0928] Pattern-formation protein/guanine nucleotide exchange factor 47.72 0.7782 50 Mapoly0107s0002 - 48.17 0.7306