Guide Gene

Gene ID
Mapoly0001s0292
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG1913] Regucalcin gene promoter region-related protein (RGPR); [GO:0048208] COPII vesicle coating; [PF12932] Vesicle coat trafficking protein Sec16 mid-region; [PTHR13402] RGPR-RELATED; [PF12931] Sec23-binding domain of Sec16

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0292 [KOG1913] Regucalcin gene promoter region-related protein (RGPR); [GO:0048208] COPII vesicle coating; [PF12932] Vesicle coat trafficking protein Sec16 mid-region; [PTHR13402] RGPR-RELATED; [PF12931] Sec23-binding domain of Sec16 0.00 1.0000
1 Mapoly0100s0023 [GO:0005086] ARF guanyl-nucleotide exchange factor activity; [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [PF01369] Sec7 domain; [GO:0032012] regulation of ARF protein signal transduction; [KOG0928] Pattern-formation protein/guanine nucleotide exchange factor1.000.8885
2 Mapoly0021s0008 [PTHR12895] FAMILY NOT NAMED; [KOG2225] Proteins containing regions of low-complexity; [PF09742] Dyggve-Melchior-Clausen syndrome protein1.730.8784
3 Mapoly0167s0007 [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [GO:0015031] protein transport; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [KOG1848] Uncharacterized conserved protein2.830.8760
4 Mapoly0008s0077 [PTHR31513] FAMILY NOT NAMED3.160.8728
5 Mapoly0016s0170 [PF13513] HEAT-like repeat; [PF03810] Importin-beta N-terminal domain; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding; [PTHR10527] IMPORTIN BETA; [KOG1241] Karyopherin (importin) beta 1; [K14293] importin subunit beta-14.900.8585
6 Mapoly0192s0005 [KOG1082] Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [GO:0005515] protein binding; [PF00856] SET domain; [GO:0008270] zinc ion binding; [PTHR22884] SET DOMAIN PROTEINS; [PF07496] CW-type Zinc Finger5.100.8822
7 Mapoly0052s0038 [KOG2280] Vacuolar assembly/sorting protein VPS16; [GO:0005737] cytoplasm; [PF04840] Vps16, C-terminal region; [PTHR12811] VACUOLAR PROTEIN SORTING VPS16; [PF04841] Vps16, N-terminal region; [GO:0006886] intracellular protein transport; [PTHR12811:SF0] SUBFAMILY NOT NAMED7.350.8371
8 Mapoly0101s0011 [GO:0005524] ATP binding; [PTHR19229] ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A (ABCA); [GO:0016887] ATPase activity; [KOG0059] Lipid exporter ABCA1 and related proteins, ABC superfamily; [K05648] ATP-binding cassette, subfamily A (ABC1), member 5; [PF12698] ABC-2 family transporter protein; [PF00005] ABC transporter7.750.8644
9 Mapoly0133s0025 [PTHR15495] NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006505] GPI anchor metabolic process; [GO:0006886] intracellular protein transport; [PF07819] PGAP1-like protein; [PTHR15495:SF7] SPHINGOSINE-1-PHOSPHATE LYASE-RELATED; [KOG3724] Negative regulator of COPII vesicle formation7.940.8528
10 Mapoly0092s0028 [GO:0005515] protein binding; [PF00612] IQ calmodulin-binding motif; [PTHR25069] FAMILY NOT NAMED8.660.8441
11 Mapoly0087s0075 [PF09735] Membrane-associated apoptosis protein; [PTHR12093] FAMILY NOT NAMED; [KOG1917] Membrane-associated hematopoietic protein10.250.8325
12 Mapoly0041s0113 [KOG1912] WD40 repeat protein; [PTHR14593] FAMILY NOT NAMED10.680.8330
13 Mapoly0045s0097 [GO:0030130] clathrin coat of trans-Golgi network vesicle; [PF00637] Region in Clathrin and VPS; [GO:0016192] vesicle-mediated transport; [PF09268] Clathrin, heavy-chain linker; [PF13838] Clathrin-H-link; [K04646] clathrin heavy chain; [GO:0006886] intracellular protein transport; [GO:0030132] clathrin coat of coated pit; [KOG0985] Vesicle coat protein clathrin, heavy chain; [PF01394] Clathrin propeller repeat; [GO:0005198] structural molecule activity; [PTHR10292] CLATHRIN HEAVY CHAIN11.490.8522
14 Mapoly0056s0137 [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [PTHR13743:SF16] SUBFAMILY NOT NAMED; [KOG1787] Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins; [PF02138] Beige/BEACH domain; [PF14844] PH domain associated with Beige/BEACH; [PF00400] WD domain, G-beta repeat11.830.8526
15 Mapoly0076s0060 [PTHR12389] ZINC FINGER PROTEIN 294; [PF11793] FANCL C-terminal domain12.410.8627
16 Mapoly0152s0029 [GO:0000287] magnesium ion binding; [PTHR24092] FAMILY NOT NAMED; [GO:0005524] ATP binding; [PF12710] haloacid dehalogenase-like hydrolase; [KOG0206] P-type ATPase; [PTHR24092:SF7] SIMILAR TO ATPASE, CLASS II, TYPE 9A (FRAGMENT); [GO:0015914] phospholipid transport; [GO:0000166] nucleotide binding; [GO:0016021] integral to membrane; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [GO:0004012] phospholipid-translocating ATPase activity14.930.7106
17 Mapoly0053s0042 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PTHR18921] MYOSIN HEAVY CHAIN - RELATED15.490.7891
18 Mapoly0095s0011 [PF10475] Protein of unknown function N-terminal domain (DUF2450); [PTHR12965] VACUOLAR PROTEIN SORTING 54; [KOG2115] Vacuolar sorting protein VPS45; [PTHR12965:SF0] SUBFAMILY NOT NAMED; [GO:0042147] retrograde transport, endosome to Golgi; [PF07928] Vps54-like protein19.050.8113
19 Mapoly0133s0001 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE; [KOG0201] Serine/threonine protein kinase20.150.8139
20 Mapoly0011s0050 [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR21704] NIPPED-B-LIKE PROTEIN (DELANGIN) SCC2-RELATED; [KOG1020] Sister chromatid cohesion protein SCC2/Nipped-B; [PF12765] HEAT repeat associated with sister chromatid cohesion; [K06672] cohesin loading factor subunit SCC2; [PF12830] Sister chromatid cohesion C-terminus20.980.8526
21 Mapoly0066s0021 [KOG1884] Uncharacterized conserved protein; [PF14649] Spatacsin C-terminus; [PTHR13650] UNCHARACTERIZED22.800.8168
22 Mapoly0031s0138 [KOG1931] Putative transmembrane protein; [PTHR13251] EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1; [PF11817] Foie gras liver health family 1; [PF12584] Trafficking protein particle complex subunit 10, TRAPPC1024.000.8234
23 Mapoly0110s0011 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG1875] Thyroid hormone receptor-associated coactivator complex component (TRAP170); [PTHR12809:SF2] SUBFAMILY NOT NAMED; [PTHR12809] MEDIATOR COMPLEX SUBUNIT; [PF08638] Mediator complex subunit MED14; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex24.740.8402
24 Mapoly0001s0267 [GO:0071203] WASH complex; [PTHR31409:SF0] SUBFAMILY NOT NAMED; [PF14745] WASH complex subunit 7, N-terminal; [KOG3578] Uncharacterized conserved protein; [PF14746] WASH complex subunit 7, C-terminal; [PF14744] WASH complex subunit 7; [PTHR31409] FAMILY NOT NAMED25.220.7958
25 Mapoly0121s0051 [KOG1003] Actin filament-coating protein tropomyosin25.240.8491
26 Mapoly0072s0100 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF13516] Leucine Rich repeat; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE26.460.7437
27 Mapoly0002s0198 [PF13831] PHD-finger; [GO:0005515] protein binding; [PF13832] PHD-zinc-finger like domain; [PF00856] SET domain; [PTHR22884] SET DOMAIN PROTEINS26.530.8439
28 Mapoly0175s0011 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR15600] FAMILY NOT NAMED; [PF13920] Zinc finger, C3HC4 type (RING finger)26.720.8037
29 Mapoly0031s0124 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG4462] WASP-interacting protein VRP1/WIP, contains WH2 domain; [PF00400] WD domain, G-beta repeat28.500.7907
30 Mapoly0138s0035 [PTHR11851] METALLOPROTEASE28.770.8016
31 Mapoly0012s0190 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0003774] motor activity; [PTHR13140] MYOSIN; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PF01843] DIL domain; [GO:0005515] protein binding; [KOG0160] Myosin class V heavy chain; [PF00612] IQ calmodulin-binding motif; [PF02736] Myosin N-terminal SH3-like domain; [PF00013] KH domain; [GO:0046872] metal ion binding; [PF00063] Myosin head (motor domain); [GO:0016459] myosin complex28.840.7858
32 Mapoly0050s0061 [GO:0016020] membrane; [GO:0005245] voltage-gated calcium channel activity; [PTHR10037] VOLTAGE-GATED CATION CHANNEL (CALCIUM AND SODIUM); [PF00520] Ion transport protein; [GO:0055085] transmembrane transport; [GO:0006811] ion transport; [PTHR10037:SF92] SODIUM CHANNEL PROTEIN TYPE III ALPHA SUBUNIT-RELATED; [GO:0005216] ion channel activity29.340.7535
33 Mapoly0002s0327 [K01552] arsenite-transporting ATPase [EC:3.6.3.16]; [KOG0209] P-type ATPase; [GO:0000166] nucleotide binding; [GO:0016021] integral to membrane; [PF00702] haloacid dehalogenase-like hydrolase; [GO:0016887] ATPase activity; [3.6.3.-] Acting on acid anhydrides; catalyzing transmembrane movement of substances.; [GO:0006812] cation transport; [PTHR24093] FAMILY NOT NAMED; [PTHR24093:SF82] ATPASE, P-TYPE, HAD SUPERFAMILY, SUBFAMILY IC, PUTATIVE; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase30.820.8088
34 Mapoly0021s0057 [PF07303] Occludin homology domain31.300.8472
35 Mapoly0002s0132 -31.530.7424
36 Mapoly0004s0049 [PF13414] TPR repeat; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [KOG0550] Molecular chaperone (DnaJ superfamily)31.940.8326
37 Mapoly0003s0046 [GO:0016020] membrane; [PTHR12961] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2; [GO:0015031] protein transport; [KOG2307] Low density lipoprotein receptor; [GO:0007030] Golgi organization; [PF06148] COG (conserved oligomeric Golgi) complex component, COG2; [PF12022] Domain of unknown function (DUF3510)33.880.7744
38 Mapoly0083s0022 [PTHR15288] SUPPRESSION OF TUMORIGENICITY 5 (ST5); [PF02141] DENN (AEX-3) domain; [PF03456] uDENN domain34.210.7570
39 Mapoly0006s0304 [KOG2033] Low density lipoprotein B-like protein; [PTHR31658:SF0] SUBFAMILY NOT NAMED; [PF08700] Vps51/Vps67; [PTHR31658] FAMILY NOT NAMED34.630.7598
40 Mapoly0051s0028 [GO:0003723] RNA binding; [PTHR23253] EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; [PF02854] MIF4G domain; [GO:0005515] protein binding; [PF02020] eIF4-gamma/eIF5/eIF2-epsilon; [KOG2992] Nucleolar GTPase/ATPase p130; [K03260] translation initiation factor eIF-4F; [PF02847] MA3 domain34.910.8253
41 Mapoly0004s0129 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [PF12436] ICP0-binding domain of Ubiquitin-specific protease 7; [PF00917] MATH domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0005515] protein binding; [KOG1863] Ubiquitin carboxyl-terminal hydrolase; [PF14533] Ubiquitin-specific protease C-terminal; [PTHR24619] FAMILY NOT NAMED; [K11838] ubiquitin carboxyl-terminal hydrolase 7 [EC:3.1.2.15]35.780.8117
42 Mapoly0101s0045 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [GO:0005515] protein binding; [K08873] PI-3-kinase-related kinase SMG-1; [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED37.040.8139
43 Mapoly1100s0003 [GO:0005524] ATP binding; [PTHR10046:SF23] LON PROTEASE HOMOLOG, MITOCHONDRIAL; [GO:0004176] ATP-dependent peptidase activity; [GO:0004252] serine-type endopeptidase activity; [PF02190] ATP-dependent protease La (LON) domain; [GO:0030163] protein catabolic process; [PTHR10046] ATP DEPENDENT LON PROTEASE FAMILY MEMBER; [GO:0006508] proteolysis37.120.7616
44 Mapoly0083s0023 [PF02893] GRAM domain; [KOG1032] Uncharacterized conserved protein, contains GRAM domain; [PTHR23319] UNCHARACTERIZED38.470.6588
45 Mapoly0021s0072 [GO:0005085] guanyl-nucleotide exchange factor activity; [GO:0007264] small GTPase mediated signal transduction; [PTHR23317] DEDICATOR OF CYTOKINESIS (DOCK); [PF14429] C2 domain in Dock180 and Zizimin proteins; [PF06920] Dedicator of cytokinesis; [KOG1997] PH domain-containing protein38.540.8019
46 Mapoly0036s0110 [PF10296] Putative integral membrane protein conserved region (DUF2404); [KOG2238] Uncharacterized conserved protein TEX2, contains PH domain; [PTHR13466:SF0] SUBFAMILY NOT NAMED; [PTHR13466] TEX2 PROTEIN-RELATED38.540.7457
47 Mapoly0113s0011 [K03165] DNA topoisomerase III [EC:5.99.1.2]; [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PF06839] GRF zinc finger; [PF01751] Toprim domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0006265] DNA topological change; [KOG1956] DNA topoisomerase III alpha; [PF01396] Topoisomerase DNA binding C4 zinc finger; [GO:0005694] chromosome; [GO:0003916] DNA topoisomerase activity; [GO:0003676] nucleic acid binding; [PTHR11390:SF23] DNA TOPOISOMERASE I-RELATED; [PTHR11390] PROKARYOTIC DNA TOPOISOMERASE; [5.99.1.2] DNA topoisomerase.; [PF01131] DNA topoisomerase38.650.7337
48 Mapoly0114s0021 [KOG0446] Vacuolar sorting protein VPS1, dynamin, and related proteins; [PF02212] Dynamin GTPase effector domain; [PF00350] Dynamin family; [PTHR11566] DYNAMIN; [PF00169] PH domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding; [PF01031] Dynamin central region38.730.7986
49 Mapoly0118s0012 [KOG1737] Oxysterol-binding protein; [PF15413] Pleckstrin homology domain; [PTHR10972] OXYSTEROL-BINDING PROTEIN-RELATED; [PF01237] Oxysterol-binding protein39.570.6969
50 Mapoly0028s0046 [GO:0005643] nuclear pore; [KOG0845] Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116); [GO:0006810] transport; [PF12110] Nuclear protein 96; [PF04096] Nucleoporin autopeptidase; [PTHR23198] NUCLEOPORIN40.350.8305
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