Guide Gene
- Gene ID
- Mapoly0096s0011
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR12436] 80 KDA MCM3-ASSOCIATED PROTEIN; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family
Coexpressed Gene List
Search : Show :Showing 1 to 50 of 200 records
Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0096s0011 [PTHR12436] 80 KDA MCM3-ASSOCIATED PROTEIN; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.00 1.0000 1 Mapoly0054s0103 [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [KOG0923] mRNA splicing factor ATP-dependent RNA helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold; [K12813] pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] 1.41 0.8961 2 Mapoly0001s0369 [K12879] THO complex subunit 2; [PF11262] Transcription factor/nuclear export subunit protein 2; [PTHR21597] THO2 PROTEIN; [PF11732] Transcription- and export-related complex subunit; [PTHR21597:SF0] SUBFAMILY NOT NAMED; [KOG1874] KEKE-like motif-containing transcription regulator (Rlr1)/suppressor of sin4 3.00 0.9011 3 Mapoly0025s0016 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain; [PF02178] AT hook motif; [KOG0383] Predicted helicase 3.74 0.8754 4 Mapoly0162s0013 [PF00929] Exonuclease; [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [PF05188] MutS domain II; [PTHR11361:SF34] DNA MISMATCH REPAIR PROTEIN MUTS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [KOG0218] Mismatch repair MSH3; [PF01624] MutS domain I; [PF05192] MutS domain III; [PF05190] MutS family domain IV 4.24 0.8773 5 Mapoly0047s0119 [KOG0891] DNA-dependent protein kinase; [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [PF02259] FAT domain; [PF08771] Rapamycin binding domain; [K07203] FKBP12-rapamycin complex-associated protein; [GO:0005515] protein binding; [GO:0008144] drug binding; [PF11865] Domain of unknown function (DUF3385); [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED 4.47 0.8839 6 Mapoly0029s0108 [PTHR10161] TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5; [K14379] tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [KOG2679] Purple (tartrate-resistant) acid phosphatase; [3.1.3.2] Acid phosphatase. 5.48 0.8788 7 Mapoly0051s0016 [PF13831] PHD-finger; [PF05964] F/Y-rich N-terminus; [GO:0005515] protein binding; [PF13832] PHD-zinc-finger like domain; [PF00856] SET domain; [PTHR13793] PHD FINGER PROTEINS; [PF00855] PWWP domain; [GO:0005634] nucleus; [PF05965] F/Y rich C-terminus 5.48 0.8847 8 Mapoly0107s0053 [GO:0008601] protein phosphatase type 2A regulator activity; [PTHR10257] SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B; [GO:0000159] protein phosphatase type 2A complex; [KOG2085] Serine/threonine protein phosphatase 2A, regulatory subunit; [GO:0007165] signal transduction; [K11584] protein phosphatase 2 (formerly 2A), regulatory subunit B'; [PF01603] Protein phosphatase 2A regulatory B subunit (B56 family) 5.83 0.8422 9 Mapoly0011s0209 - 6.00 0.8402 10 Mapoly0134s0010 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF12726] SEN1 N terminal; [PF13086] AAA domain; [KOG2812] Uncharacterized conserved protein; [PF13087] AAA domain 7.21 0.8207 11 Mapoly0002s0195 [PTHR15180] GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1; [PF04182] B-block binding subunit of TFIIIC 7.48 0.8640 12 Mapoly0224s0007 [PTHR12456] TOPOISOMERASE 1-BINDING RING FINGER-RELATED; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding 9.06 0.8035 13 Mapoly0053s0062 [PF12739] ER-Golgi trafficking TRAPP I complex 85 kDa subunit; [PTHR12975] TRANSPORT PROTEIN (TRAPP); [PTHR12975:SF6] SUBFAMILY NOT NAMED; [KOG1938] Protein with predicted involvement in meiosis (GSG1) 9.17 0.8197 14 Mapoly0099s0003 [GO:0000922] spindle pole; [PF04130] Spc97 / Spc98 family; [GO:0005815] microtubule organizing center; [GO:0000226] microtubule cytoskeleton organization; [PTHR19302] GAMMA TUBULIN COMPLEX PROTEIN 10.77 0.8197 15 Mapoly0002s0028 [PF00630] Filamin/ABP280 repeat; [GO:0003676] nucleic acid binding; [KOG0146] RNA-binding protein ETR-3 (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11.00 0.8583 16 Mapoly0143s0017 - 11.75 0.8243 17 Mapoly0070s0048 [GO:0005665] DNA-directed RNA polymerase II, core complex; [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [PF05000] RNA polymerase Rpb1, domain 4; [PF04990] RNA polymerase Rpb1, domain 7; [PF05001] RNA polymerase Rpb1 C-terminal repeat; [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [KOG0260] RNA polymerase II, large subunit; [GO:0006366] transcription from RNA polymerase II promoter; [GO:0003899] DNA-directed RNA polymerase activity; [K03006] DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]; [PF04983] RNA polymerase Rpb1, domain 3; [2.7.7.6] DNA-directed RNA polymerase.; [PF04992] RNA polymerase Rpb1, domain 6; [PTHR19376:SF33] DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'' 13.27 0.8246 18 Mapoly0009s0011 [PF06650] Protein of unknown function (DUF1162); [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter 13.49 0.8429 19 Mapoly0032s0123 [PTHR13484] FIP1-LIKE 1 PROTEIN; [PF05182] Fip1 motif; [KOG2812] Uncharacterized conserved protein 13.78 0.8374 20 Mapoly0029s0052 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR12950] FAMILY NOT NAMED; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [PF06333] Mediator complex subunit 13 C-terminal 13.86 0.8495 21 Mapoly0005s0048 [K14328] regulator of nonsense transcripts 3; [PTHR13112:SF0] SUBFAMILY NOT NAMED; [PTHR13112] UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN; [PF03467] Smg-4/UPF3 family 13.96 0.7842 22 Mapoly0005s0070 [PF05623] Protein of unknown function (DUF789); [PTHR32010] FAMILY NOT NAMED 14.83 0.8618 23 Mapoly0111s0052 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [KOG1015] Transcription regulator XNP/ATRX, DEAD-box superfamily; [K11681] helicase SWR1 [EC:3.6.4.12]; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [3.6.4.12] DNA helicase.; [PF00271] Helicase conserved C-terminal domain; [PF07529] HSA; [PF13921] Myb-like DNA-binding domain 15.00 0.8633 24 Mapoly0006s0237 [PF13465] Zinc-finger double domain; [PF02373] JmjC domain, hydroxylase; [PF02375] jmjN domain; [PTHR10694] JUMONJI DOMAIN CONTAINING PROTEIN 16.52 0.8297 25 Mapoly0010s0094 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [PF02259] FAT domain; [GO:0005515] protein binding; [PF00454] Phosphatidylinositol 3- and 4-kinase; [KOG0889] Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily; [PTHR11139:SF1] ATM-RELATED; [K08874] transformation/transcription domain-associated protein; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED 18.76 0.8426 26 Mapoly0004s0038 [PF10440] Ubiquitin-binding WIYLD domain; [KOG1082] Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [PF05033] Pre-SET motif; [GO:0005515] protein binding; [PF00856] SET domain; [GO:0008270] zinc ion binding; [PTHR22884:SF23] SET DOMAIN PROTEIN; [GO:0018024] histone-lysine N-methyltransferase activity; [PTHR22884] SET DOMAIN PROTEINS; [GO:0005634] nucleus; [GO:0034968] histone lysine methylation 18.97 0.7393 27 Mapoly0001s0206 [KOG2073] SAP family cell cycle dependent phosphatase-associated protein; [PTHR12634:SF8] SUBFAMILY NOT NAMED; [PF04499] SIT4 phosphatase-associated protein; [PTHR12634] SIT4(YEAST)-ASSOCIATING PROTEIN-RELATED 19.60 0.7948 28 Mapoly0042s0082 [GO:0005643] nuclear pore; [PF07926] TPR/MLP1/MLP2-like protein; [PTHR18898] NUCLEOPROTEIN TPR-RELATED; [K09291] nucleoprotein TPR; [KOG4674] Uncharacterized conserved coiled-coil protein; [GO:0006606] protein import into nucleus 20.07 0.8433 29 Mapoly0001s0480 [PF00249] Myb-like DNA-binding domain; [PTHR13992] NUCLEAR RECEPTOR CO-REPRESSOR RELATED (NCOR); [GO:0003682] chromatin binding; [PTHR13992:SF7] GB DEF: ZGC:56355 PROTEIN; [KOG3227] Calcium-responsive transcription coactivator 20.49 0.7659 30 Mapoly0157s0010 [GO:0003677] DNA binding; [GO:0016570] histone modification; [GO:0006352] DNA-dependent transcription, initiation; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0005515] protein binding; [PF03126] Plus-3 domain; [PTHR22884] SET DOMAIN PROTEINS; [PF02213] GYF domain; [GO:0005634] nucleus; [KOG1946] RNA polymerase I transcription factor UAF; [PF02201] SWIB/MDM2 domain; [GO:0046872] metal ion binding 20.62 0.8219 31 Mapoly0029s0152 [PTHR15239] UNCHARACTERIZED; [PF05833] Fibronectin-binding protein A N-terminus (FbpA); [PTHR15239:SF1] COLON CANCER ANTIGEN 1; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding; [PF11923] Domain of unknown function (DUF3441); [KOG2030] Predicted RNA-binding protein; [PF05670] Domain of unknown function (DUF814) 21.75 0.8023 32 Mapoly0027s0186 [GO:0005524] ATP binding; [K10866] DNA repair protein RAD50 [EC:3.6.-.-]; [PF13476] AAA domain; [GO:0008270] zinc ion binding; [PF04423] Rad50 zinc hook motif; [3.6.-.-] Acting on acid anhydrides.; [GO:0006281] DNA repair; [KOG0962] DNA repair protein RAD50, ABC-type ATPase/SMC superfamily; [PTHR18867:SF12] SUBFAMILY NOT NAMED; [PTHR18867] RAD50; [GO:0004518] nuclease activity; [GO:0030870] Mre11 complex; [PF13558] Putative exonuclease SbcCD, C subunit 21.91 0.8368 33 Mapoly0131s0010 [PTHR15921:SF3] SUBFAMILY NOT NAMED; [KOG2071] mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11; [PF04818] RNA polymerase II-binding domain.; [PTHR15921] PRE-MRNA CLEAVAGE COMPLEX II 23.24 0.8429 34 Mapoly0119s0035 - 23.32 0.7803 35 Mapoly0122s0032 [PF14695] Lines C-terminus 25.50 0.7304 36 Mapoly0001s0542 [KOG0266] WD40 repeat-containing protein; [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [PF02138] Beige/BEACH domain; [PF13385] Concanavalin A-like lectin/glucanases superfamily; [PF14844] PH domain associated with Beige/BEACH; [PF00400] WD domain, G-beta repeat 25.69 0.8189 37 Mapoly0112s0032 [KOG2652] RNA polymerase II transcription initiation factor TFIIA, large chain; [PTHR12694] TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1; [PTHR12694:SF8] TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1; [PF03153] Transcription factor IIA, alpha/beta subunit; [GO:0005672] transcription factor TFIIA complex; [K03122] transcription initiation factor TFIIA large subunit; [GO:0006367] transcription initiation from RNA polymerase II promoter 27.57 0.7586 38 Mapoly0153s0011 [PF13871] Helicase_C-like; [GO:0006355] regulation of transcription, DNA-dependent; [KOG1513] Nuclear helicase MOP-3/SNO (DEAD-box superfamily); [PTHR12706] STRAWBERRY NOTCH-RELATED; [PF13872] P-loop containing NTP hydrolase pore-1 28.14 0.8237 39 Mapoly0069s0061 [GO:0004677] DNA-dependent protein kinase activity; [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [PF02259] FAT domain; [GO:0005515] protein binding; [K06642] DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]; [PF08163] NUC194 domain; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0005634] nucleus; [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED; [GO:0006303] double-strand break repair via nonhomologous end joining 28.98 0.7864 40 Mapoly0001s0208 [PTHR31431] FAMILY NOT NAMED; [KOG4833] Uncharacterized conserved protein; [K14311] nuclear pore complex protein Nup188; [PF10487] Nucleoporin subcomplex protein binding to Pom34 29.17 0.8080 41 Mapoly0094s0033 [GO:0016567] protein ubiquitination; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [KOG0314] Predicted E3 ubiquitin ligase; [GO:0005634] nucleus; [PF08783] DWNN domain; [GO:0003676] nucleic acid binding; [GO:0004842] ubiquitin-protein ligase activity; [PTHR15439] RETINOBLASTOMA-BINDING PROTEIN 6; [PF04564] U-box domain 29.70 0.7347 42 Mapoly0049s0040 [GO:0005524] ATP binding; [PTHR24058:SF23] DUAL-SPECIFICITY TYROSINE REGULATED PROTEIN KINASE 2; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24058] DUAL SPECIFICITY PROTEIN KINASE; [KOG0667] Dual-specificity tyrosine-phosphorylation regulated kinase; [GO:0006468] protein phosphorylation 29.73 0.8108 43 Mapoly0004s0112 - 30.30 0.7921 44 Mapoly0113s0018 - 30.59 0.7916 45 Mapoly0123s0029 [PTHR23188] FAMILY NOT NAMED; [KOG2478] Putative RNA polymerase II regulator; [PF03985] Paf1 30.59 0.7715 46 Mapoly0033s0024 [GO:0005524] ATP binding; [K14572] midasin; [PF07728] AAA domain (dynein-related subfamily); [GO:0016887] ATPase activity; [KOG1808] AAA ATPase containing von Willebrand factor type A (vWA) domain; [PTHR22908] MIDASIN-RELATED 31.18 0.7897 47 Mapoly0015s0206 [PF05236] Transcription initiation factor TFIID component TAF4 family; [GO:0006352] DNA-dependent transcription, initiation; [PTHR15138] FAMILY NOT NAMED; [PF12174] RCD1-SRO-TAF4 (RST) plant domain; [GO:0005669] transcription factor TFIID complex 31.30 0.8105 48 Mapoly0011s0008 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [KOG0941] E3 ubiquitin protein ligase; [GO:0004842] ubiquitin-protein ligase activity; [PF00415] Regulator of chromosome condensation (RCC1) repeat; [PF00632] HECT-domain (ubiquitin-transferase) 32.12 0.7641 49 Mapoly0003s0184 [GO:0006396] RNA processing; [GO:0003677] DNA binding; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [K11592] endoribonuclease Dicer [EC:3.1.26.-]; [PF02170] PAZ domain; [3.1.26.-] Endoribonucleases producing 5'-phosphomonoesters.; [PTHR14950] HELICASE-RELATED; [GO:0005515] protein binding; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [GO:0016787] hydrolase activity; [PF04851] Type III restriction enzyme, res subunit; [PF03368] Dicer dimerisation domain; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1; [KOG0701] dsRNA-specific nuclease Dicer and related ribonucleases 32.86 0.8090 50 Mapoly0007s0083 - 33.27 0.7387