Guide Gene

Gene ID
Mapoly0006s0237
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13465] Zinc-finger double domain; [PF02373] JmjC domain, hydroxylase; [PF02375] jmjN domain; [PTHR10694] JUMONJI DOMAIN CONTAINING PROTEIN

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0006s0237 [PF13465] Zinc-finger double domain; [PF02373] JmjC domain, hydroxylase; [PF02375] jmjN domain; [PTHR10694] JUMONJI DOMAIN CONTAINING PROTEIN 0.00 1.0000
1 Mapoly0025s0016 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain; [PF02178] AT hook motif; [KOG0383] Predicted helicase1.000.9013
2 Mapoly0074s0075 [PTHR31546] FAMILY NOT NAMED; [PF10033] Autophagy-related protein 13; [KOG4573] Phosphoprotein involved in cytoplasm to vacuole targeting and autophagy2.240.8520
3 Mapoly0004s0120 [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [PF05000] RNA polymerase Rpb1, domain 4; [PF11523] Protein of unknown function (DUF3223); [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04983] RNA polymerase Rpb1, domain 3; [KOG0261] RNA polymerase III, large subunit; [PTHR19376:SF33] DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA''2.450.8438
4 Mapoly0010s0094 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [PF02259] FAT domain; [GO:0005515] protein binding; [PF00454] Phosphatidylinositol 3- and 4-kinase; [KOG0889] Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily; [PTHR11139:SF1] ATM-RELATED; [K08874] transformation/transcription domain-associated protein; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED2.450.8848
5 Mapoly0022s0041 [GO:0003723] RNA binding; [KOG2190] PolyC-binding proteins alphaCP-1 and related KH domain proteins; [PTHR10288] KH DOMAIN CONTAINING RNA BINDING PROTEIN; [PF00013] KH domain3.000.8842
6 Mapoly0126s0027 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG0390] DNA repair protein, SNF2 family; [PF00271] Helicase conserved C-terminal domain3.160.8313
7 Mapoly0079s0050 [2.7.11.25] Mitogen-activated protein kinase kinase kinase.; [PF07714] Protein tyrosine kinase; [K04424] sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25]; [KOG0192] Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs; [PTHR23257] SERINE-THREONINE PROTEIN KINASE; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF14381] Ethylene-responsive protein kinase Le-CTR14.690.8310
8 Mapoly0011s0198 [PF10358] N-terminal C2 in EEIG1 and EHBP1 proteins5.570.8092
9 Mapoly0032s0168 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24058:SF17] DUAL SPECIFICITY PROTEIN KINASE YAK1; [PTHR24058] DUAL SPECIFICITY PROTEIN KINASE; [KOG0667] Dual-specificity tyrosine-phosphorylation regulated kinase; [GO:0006468] protein phosphorylation8.120.7560
10 Mapoly0001s0149 [K11596] argonaute; [PF02170] PAZ domain; [PF08699] Domain of unknown function (DUF1785); [PTHR22891] EUKARYOTIC TRANSLATION INITIATION FACTOR 2C; [PF02171] Piwi domain; [GO:0005515] protein binding; [KOG1041] Translation initiation factor 2C (eIF-2C) and related proteins8.490.8321
11 Mapoly0011s0132 -8.770.8409
12 Mapoly0032s0123 [PTHR13484] FIP1-LIKE 1 PROTEIN; [PF05182] Fip1 motif; [KOG2812] Uncharacterized conserved protein9.380.8372
13 Mapoly0001s0369 [K12879] THO complex subunit 2; [PF11262] Transcription factor/nuclear export subunit protein 2; [PTHR21597] THO2 PROTEIN; [PF11732] Transcription- and export-related complex subunit; [PTHR21597:SF0] SUBFAMILY NOT NAMED; [KOG1874] KEKE-like motif-containing transcription regulator (Rlr1)/suppressor of sin410.950.8662
14 Mapoly0006s0222 [GO:0005524] ATP binding; [GO:0032300] mismatch repair complex; [KOG1977] DNA mismatch repair protein - MLH3 family; [PTHR10073:SF7] DNA MISMATCH REPAIR PROTEIN MLH3; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0007131] reciprocal meiotic recombination; [PTHR10073] DNA MISMATCH REPAIR PROTEIN (MLH, PMS, MUTL); [GO:0006298] mismatch repair; [PF08676] MutL C terminal dimerisation domain; [GO:0030983] mismatched DNA binding; [PF01119] DNA mismatch repair protein, C-terminal domain; [K08739] DNA mismatch repair protein MLH311.220.8296
15 Mapoly0049s0040 [GO:0005524] ATP binding; [PTHR24058:SF23] DUAL-SPECIFICITY TYROSINE REGULATED PROTEIN KINASE 2; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24058] DUAL SPECIFICITY PROTEIN KINASE; [KOG0667] Dual-specificity tyrosine-phosphorylation regulated kinase; [GO:0006468] protein phosphorylation14.280.8297
16 Mapoly0005s0201 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0005515] protein binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR12348] TSC22; [PF00498] FHA domain15.870.8271
17 Mapoly0070s0048 [GO:0005665] DNA-directed RNA polymerase II, core complex; [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [PF05000] RNA polymerase Rpb1, domain 4; [PF04990] RNA polymerase Rpb1, domain 7; [PF05001] RNA polymerase Rpb1 C-terminal repeat; [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [KOG0260] RNA polymerase II, large subunit; [GO:0006366] transcription from RNA polymerase II promoter; [GO:0003899] DNA-directed RNA polymerase activity; [K03006] DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]; [PF04983] RNA polymerase Rpb1, domain 3; [2.7.7.6] DNA-directed RNA polymerase.; [PF04992] RNA polymerase Rpb1, domain 6; [PTHR19376:SF33] DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA''15.910.8128
18 Mapoly0096s0011 [PTHR12436] 80 KDA MCM3-ASSOCIATED PROTEIN; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family16.520.8297
19 Mapoly0003s0184 [GO:0006396] RNA processing; [GO:0003677] DNA binding; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [K11592] endoribonuclease Dicer [EC:3.1.26.-]; [PF02170] PAZ domain; [3.1.26.-] Endoribonucleases producing 5'-phosphomonoesters.; [PTHR14950] HELICASE-RELATED; [GO:0005515] protein binding; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [GO:0016787] hydrolase activity; [PF04851] Type III restriction enzyme, res subunit; [PF03368] Dicer dimerisation domain; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1; [KOG0701] dsRNA-specific nuclease Dicer and related ribonucleases16.970.8288
20 Mapoly0054s0081 [GO:0003677] DNA binding; [PF01426] BAH domain; [GO:0003682] chromatin binding; [PF08711] TFIIS helical bundle-like domain; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [KOG1886] BAH domain proteins; [PTHR15141] TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 317.660.7439
21 Mapoly0004s0112 -18.030.8124
22 Mapoly0014s0115 [PTHR15137] TRANSCRIPTION INITIATION FACTOR TFIID; [PF01433] Peptidase family M1; [GO:0008237] metallopeptidase activity; [GO:0008270] zinc ion binding; [K03128] transcription initiation factor TFIID subunit 2; [KOG1932] TATA binding protein associated factor18.170.8144
23 Mapoly0045s0054 [KOG1928] Alpha-1,4-N-acetylglucosaminyltransferase; [PF04572] Alpha 1,4-glycosyltransferase conserved region; [PF04488] Glycosyltransferase sugar-binding region containing DXD motif; [PTHR12042] LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE (ALPHA- 1,4-GALACTOSYLTRANSFERASE)18.300.7559
24 Mapoly0005s0048 [K14328] regulator of nonsense transcripts 3; [PTHR13112:SF0] SUBFAMILY NOT NAMED; [PTHR13112] UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN; [PF03467] Smg-4/UPF3 family18.330.7718
25 Mapoly0113s0018 -18.970.8096
26 Mapoly0076s0037 [PF06101] Plant protein of unknown function (DUF946); [PF09333] ATG C terminal domain; [PF06650] Protein of unknown function (DUF1162); [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PTHR16166:SF61] PUTATIVE UNCHARACTERIZED PROTEIN19.240.7504
27 Mapoly0058s0075 [PF00773] RNB domain; [PTHR23355:SF9] RIBONUCLEASE R; [PTHR23355] RIBONUCLEASE21.490.7889
28 Mapoly0047s0119 [KOG0891] DNA-dependent protein kinase; [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [PF02259] FAT domain; [PF08771] Rapamycin binding domain; [K07203] FKBP12-rapamycin complex-associated protein; [GO:0005515] protein binding; [GO:0008144] drug binding; [PF11865] Domain of unknown function (DUF3385); [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF02260] FATC domain; [PTHR11139] ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED21.820.8288
29 Mapoly0029s0108 [PTHR10161] TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5; [K14379] tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [KOG2679] Purple (tartrate-resistant) acid phosphatase; [3.1.3.2] Acid phosphatase.23.870.8293
30 Mapoly0084s0051 [2.1.1.43] Histone-lysine N-methyltransferase.; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1079] Transcriptional repressor EZH1; [PTHR22884] SET DOMAIN PROTEINS; [K11430] enhancer of zeste [EC:2.1.1.43]24.190.7837
31 Mapoly0004s0006 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0600] Cdc2-related protein kinase; [PTHR24056] CELL DIVISION PROTEIN KINASE24.540.7853
32 Mapoly0067s0049 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PF00580] UvrD/REP helicase N-terminal domain; [PF13361] UvrD-like helicase C-terminal domain; [GO:0016787] hydrolase activity; [GO:0004003] ATP-dependent DNA helicase activity; [PTHR11070] UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER25.220.7734
33 Mapoly0032s0133 [PF12432] Protein of unknown function (DUF3677); [PTHR21224:SF1] SUBFAMILY NOT NAMED; [K13138] integrator complex subunit 1; [PTHR21224] UNCHARACTERIZED25.830.8102
34 Mapoly0005s0067 [PTHR15242:SF0] SUBFAMILY NOT NAMED; [PTHR15242] SPLICING FACTOR, ARGININE/SERINE-RICH 2,RNAP C-TERM INTERACTING PROTEIN; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0046872] metal ion binding28.250.8203
35 Mapoly0105s0028 [PTHR24012] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)28.570.8035
36 Mapoly0067s0068 [KOG2266] Chromatin-associated protein Dek and related proteins, contains SAP DNA binding domain; [PTHR13468:SF1] DEK ONCOGENE; [PF08766] DEK C terminal domain; [PTHR13468] DEK PROTEIN29.390.8126
37 Mapoly0053s0062 [PF12739] ER-Golgi trafficking TRAPP I complex 85 kDa subunit; [PTHR12975] TRANSPORT PROTEIN (TRAPP); [PTHR12975:SF6] SUBFAMILY NOT NAMED; [KOG1938] Protein with predicted involvement in meiosis (GSG1)29.700.7785
38 Mapoly0026s0020 [KOG2253] U1 snRNP complex, subunit SNU71 and related PWI-motif proteins30.400.8103
39 Mapoly0005s0070 [PF05623] Protein of unknown function (DUF789); [PTHR32010] FAMILY NOT NAMED32.250.8197
40 Mapoly0028s0110 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [PTHR23069:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PF00439] Bromodomain; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0732] AAA+-type ATPase containing the bromodomain32.730.8156
41 Mapoly0026s0031 [GO:0000287] magnesium ion binding; [PTHR24092] FAMILY NOT NAMED; [GO:0005524] ATP binding; [PF12710] haloacid dehalogenase-like hydrolase; [KOG0206] P-type ATPase; [PTHR24092:SF7] SIMILAR TO ATPASE, CLASS II, TYPE 9A (FRAGMENT); [GO:0000166] nucleotide binding; [GO:0015914] phospholipid transport; [GO:0016021] integral to membrane; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [GO:0004012] phospholipid-translocating ATPase activity32.800.6198
42 Mapoly0119s0048 [PTHR21654] FAMILY NOT NAMED; [PTHR21654:SF0] SUBFAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain33.880.7909
43 Mapoly0013s0109 [PF00514] Armadillo/beta-catenin-like repeat; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING34.470.7849
44 Mapoly0001s0355 [GO:0016020] membrane; [GO:0004222] metalloendopeptidase activity; [PF01457] Leishmanolysin; [PF07974] EGF-like domain; [KOG2556] Leishmanolysin-like peptidase (Peptidase M8 family); [3.4.24.36] Leishmanolysin.; [GO:0007155] cell adhesion; [GO:0006508] proteolysis; [K01404] leishmanolysin [EC:3.4.24.36]; [PTHR10942] LEISHMANOLYSIN-LIKE PEPTIDASE34.640.7780
45 Mapoly0107s0024 [GO:0005524] ATP binding; [GO:0046982] protein heterodimerization activity; [KOG0018] Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1); [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR18937:SF12] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC1; [GO:0007064] mitotic sister chromatid cohesion; [PTHR18937] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; [PF02463] RecF/RecN/SMC N terminal domain; [GO:0008278] cohesin complex; [GO:0051276] chromosome organization; [GO:0005694] chromosome; [PF06470] SMC proteins Flexible Hinge Domain; [K06636] structural maintenance of chromosome 135.940.7937
46 Mapoly0157s0010 [GO:0003677] DNA binding; [GO:0016570] histone modification; [GO:0006352] DNA-dependent transcription, initiation; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0005515] protein binding; [PF03126] Plus-3 domain; [PTHR22884] SET DOMAIN PROTEINS; [PF02213] GYF domain; [GO:0005634] nucleus; [KOG1946] RNA polymerase I transcription factor UAF; [PF02201] SWIB/MDM2 domain; [GO:0046872] metal ion binding36.880.7918
47 Mapoly0002s0028 [PF00630] Filamin/ABP280 repeat; [GO:0003676] nucleic acid binding; [KOG0146] RNA-binding protein ETR-3 (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)37.090.8053
48 Mapoly0014s0222 [PTHR31798] FAMILY NOT NAMED39.060.7158
49 Mapoly0047s0113 -39.240.7725
50 Mapoly0019s0177 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [KOG0242] Kinesin-like protein; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity; [PF13920] Zinc finger, C3HC4 type (RING finger)39.340.7396
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