Guide Gene

Gene ID
Mapoly0068s0080
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF07719] Tetratricopeptide repeat; [KOG0543] FKBP-type peptidyl-prolyl cis-trans isomerase; [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF13414] TPR repeat; [GO:0006457] protein folding; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0068s0080 [PF07719] Tetratricopeptide repeat; [KOG0543] FKBP-type peptidyl-prolyl cis-trans isomerase; [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF13414] TPR repeat; [GO:0006457] protein folding; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase 0.00 1.0000
1 Mapoly0006s0051 [PF13917] Zinc knuckle; [KOG2985] Uncharacterized conserved protein; [PTHR31437] FAMILY NOT NAMED3.000.7330
2 Mapoly0069s0077 [PTHR11736:SF14] MAGE-RELATED; [PTHR11736] MELANOMA-ASSOCIATED ANTIGEN (MAGE ANTIGEN); [PF01454] MAGE family; [KOG4562] Uncharacterized conserved protein (tumor-rejection antigen MAGE in humans)10.200.6652
3 Mapoly0044s0136 [PF12171] Zinc-finger double-stranded RNA-binding; [K13104] zinc finger protein 830; [PTHR13278] UNCHARACTERIZED; [KOG3032] Uncharacterized conserved protein12.730.6364
4 Mapoly0072s0034 [K12178] COP9 signalosome complex subunit 4; [GO:0005515] protein binding; [KOG1497] COP9 signalosome, subunit CSN4; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; [PTHR10855:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 414.800.6573
5 Mapoly0031s0139 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0729] 26S proteasome regulatory complex, ATPase RPT1; [PF00004] ATPase family associated with various cellular activities (AAA); [K03061] 26S proteasome regulatory subunit T1; [PTHR23073:SF13] 26S PROTEASE REGULATORY SUBUNIT 717.890.6498
6 Mapoly0005s0148 [PTHR21250:SF0] SUBFAMILY NOT NAMED; [KOG4032] Uncharacterized conserved protein; [PTHR21250] UNCHARACTERIZED; [PF10273] Pre-rRNA-processing protein TSR218.550.5684
7 Mapoly0061s0091 [PTHR10229:SF1] GTP-BINDING PROTEIN HFLX; [PF01926] 50S ribosome-binding GTPase; [KOG0410] Predicted GTP binding protein; [PTHR10229] GTP-BINDING PROTEIN HFLX; [GO:0005525] GTP binding21.170.5823
8 Mapoly0130s0032 [K12592] exosome complex protein LRP1; [PTHR15341] SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR; [PF04000] Sas10/Utp3/C1D family; [KOG4835] DNA-binding protein C1D involved in regulation of double-strand break repair23.020.6192
9 Mapoly0051s0019 [KOG2273] Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins; [PTHR10555] SORTING NEXIN; [PF00787] PX domain; [PF09325] Vps5 C terminal like; [GO:0035091] phosphatidylinositol binding24.080.5816
10 Mapoly0057s0106 [K08288] protein kinase C substrate 80K-H; [PTHR12630:SF4] PROTEIN KINASE C SUBSTRATE 80K-H; [KOG2397] Protein kinase C substrate, 80 KD protein, heavy chain; [PTHR12630] N-LINKED OLIGOSACCHARIDE PROCESSING; [PF12999] Glucosidase II beta subunit-like; [PF13015] Glucosidase II beta subunit-like protein25.920.5941
11 Mapoly0071s0060 -32.400.6313
12 Mapoly0070s0050 [GO:0004843] ubiquitin-specific protease activity; [PTHR10589] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; [K05610] ubiquitin carboxyl-terminal hydrolase L5 [EC:3.4.19.12]; [GO:0006511] ubiquitin-dependent protein catabolic process; [KOG2778] Ubiquitin C-terminal hydrolase; [GO:0005622] intracellular; [3.4.19.12] Ubiquitinyl hydrolase 1.; [PTHR10589:SF16] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L5; [PF01088] Ubiquitin carboxyl-terminal hydrolase, family 133.470.6512
13 Mapoly0013s0140 [K13107] RNA-binding motif protein, X-linked 2; [KOG0126] Predicted RNA-binding protein (RRM superfamily); [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)36.540.6001
14 Mapoly0013s0192 [PF05477] Surfeit locus protein 2 (SURF2); [PTHR32175] FAMILY NOT NAMED37.500.5960
15 Mapoly0001s0392 [KOG0121] Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily); [GO:0000339] RNA cap binding; [GO:0045292] mRNA cis splicing, via spliceosome; [K12883] nuclear cap-binding protein subunit 2; [GO:0003676] nucleic acid binding; [GO:0005846] nuclear cap binding complex; [PTHR18847] 20 KD NUCLEAR CAP BINDING PROTEIN; [PTHR18847:SF0] SUBFAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)40.600.6227
16 Mapoly0009s0161 [PTHR15606:SF4] SUBFAMILY NOT NAMED; [PF00226] DnaJ domain; [PTHR15606] DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED; [KOG1150] Predicted molecular chaperone (DnaJ superfamily); [K09528] DnaJ homolog subfamily C member 840.790.5840
17 Mapoly0123s0035 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [KOG3201] Uncharacterized conserved protein44.900.5887
18 Mapoly0170s0030 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0726] 26S proteasome regulatory complex, ATPase RPT2; [PTHR23073:SF9] 26S PROTEASE REGULATORY SUBUNIT 4; [PF00004] ATPase family associated with various cellular activities (AAA); [K03062] 26S proteasome regulatory subunit T248.370.6151
19 Mapoly0006s0052 [GO:0003723] RNA binding; [GO:0004523] ribonuclease H activity; [PF01351] Ribonuclease HII; [PTHR10954] RIBONUCLEASE H2 SUBUNIT A; [K10743] ribonuclease H2 subunit A [EC:3.1.26.4]; [3.1.26.4] Ribonuclease H.; [PTHR10954:SF7] RIBONUCLEASE H2 SUBUNIT A; [KOG2299] Ribonuclease HI51.180.6202
20 Mapoly0158s0020 -52.230.5362
21 Mapoly0009s0012 [KOG0113] U1 small nuclear ribonucleoprotein (RRM superfamily); [PTHR13952] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD; [GO:0003676] nucleic acid binding; [K13155] U11/U12 small nuclear ribonucleoprotein 35 kDa protein; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)54.260.5995
22 Mapoly0174s0023 [GO:0006396] RNA processing; [PTHR13734] TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER; [GO:0003723] RNA binding; [PF01743] Poly A polymerase head domain; [KOG2159] tRNA nucleotidyltransferase/poly(A) polymerase; [GO:0016779] nucleotidyltransferase activity; [PTHR13734:SF5] POLY(A) POLYMERASE54.400.6186
23 Mapoly0009s0112 [GO:0005524] ATP binding; [K03064] 26S proteasome regulatory subunit T4; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0651] 26S proteasome regulatory complex, ATPase RPT4; [PF00004] ATPase family associated with various cellular activities (AAA)57.580.5993
24 Mapoly0134s0033 [KOG0739] AAA+-type ATPase; [GO:0005524] ATP binding; [PTHR14690] UNCHARACTERIZED; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR14690:SF0] SUBFAMILY NOT NAMED58.630.5977
25 Mapoly0011s0013 [PTHR13264:SF5] SUBFAMILY NOT NAMED; [K12868] pre-mRNA-splicing factor SYF2; [PTHR13264] GCIP-INTERACTING PROTEIN P29; [KOG2609] Cyclin D-interacting protein GCIP; [PF08231] SYF2 splicing factor62.460.5627
26 Mapoly0070s0083 [KOG2160] Armadillo/beta-catenin-like repeat-containing protein; [PTHR19316] PROTEIN FOLDING REGULATOR; [K09562] hsp70-interacting protein65.180.5752
27 Mapoly0002s0233 [GO:0008168] methyltransferase activity; [KOG2899] Predicted methyltransferase; [PF06859] Bicoid-interacting protein 3 (Bin3); [PTHR12315:SF0] SUBFAMILY NOT NAMED; [PTHR12315] BICOID-INTERACTING PROTEIN RELATED65.560.6003
28 Mapoly0001s0053 -67.820.5945
29 Mapoly0138s0022 [KOG2889] Predicted PRP38-like splicing factor; [PF03371] PRP38 family; [PTHR23142] UNCHARACTERIZED; [K12849] pre-mRNA-splicing factor 38A69.820.6036
30 Mapoly0004s0034 [PTHR21738:SF0] SUBFAMILY NOT NAMED; [PTHR21738] UNCHARACTERIZED; [KOG3190] Uncharacterized conserved protein; [PF06102] Domain of unknown function (DUF947)70.210.5756
31 Mapoly0026s0018 [GO:0016787] hydrolase activity; [3.6.1.19] Nucleoside-triphosphate diphosphatase.; [PF01725] Ham1 family; [KOG3222] Inosine triphosphate pyrophosphatase; [PTHR11067] INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN; [K01519] nucleoside-triphosphate pyrophosphatase [EC:3.6.1.19]71.330.5627
32 Mapoly0080s0030 [KOG1532] GTPase XAB1, interacts with DNA repair protein XPA; [GO:0000166] nucleotide binding; [K06883] 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]; [PTHR21231] XPA-BINDING PROTEIN 1-RELATED; [PF03029] Conserved hypothetical ATP binding protein75.780.4974
33 Mapoly0111s0050 [KOG1577] Aldo/keto reductase family proteins; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family76.470.5366
34 Mapoly0031s0039 [GO:0003677] DNA binding; [PTHR13408] DNA-DIRECTED RNA POLYMERASE III; [PF05132] RNA polymerase III RPC4; [PTHR13408:SF0] SUBFAMILY NOT NAMED; [GO:0005666] DNA-directed RNA polymerase III complex; [GO:0003899] DNA-directed RNA polymerase activity; [GO:0006383] transcription from RNA polymerase III promoter76.940.5750
35 Mapoly0025s0114 -80.420.5318
36 Mapoly0031s0028 -86.080.5804
37 Mapoly0001s0132 [PTHR14211] GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2; [PF07767] Nop53 (60S ribosomal biogenesis); [KOG2823] Cellular protein (glioma tumor suppressor candidate region gene 2)90.100.5756
38 Mapoly0014s0191 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR15970] FAMILY NOT NAMED; [GO:0032783] ELL-EAF complex; [KOG4795] Protein associated with transcriptional elongation factor ELL; [PTHR15970:SF2] GB DEF: HYPOTHETICAL PROTEIN F23N20.7 (AT1G71080/F23N20_7); [PF09816] RNA polymerase II transcription elongation factor90.770.5420
39 Mapoly0100s0024 [KOG1763] Uncharacterized conserved protein, contains CCCH-type Zn-finger; [PTHR12681] ZINC FINGER-CONTAINING PROTEIN P48ZNF91.420.5522
40 Mapoly0009s0086 [PTHR10741:SF4] PUTATIVE UNCHARACTERIZED PROTEIN ORF-C08_005 (PUTATIVE UNCHARACTERIZED PROTEIN); [PTHR10741] TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X; [GO:0043565] sequence-specific DNA binding; [KOG3066] Translin-associated protein X; [PF01997] Translin family98.640.5753
41 Mapoly0049s0105 [GO:0016272] prefoldin complex; [KOG4098] Molecular chaperone Prefoldin, subunit 2; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding; [PTHR13303] PREFOLDIN SUBUNIT 2; [PF01920] Prefoldin subunit99.720.5489
42 Mapoly0015s0022 [GO:0005634] nucleus; [PTHR12722] XAP-5 PROTEIN-RELATED; [PF04921] XAP5, circadian clock regulator; [K13119] protein FAM50; [KOG2894] Uncharacterized conserved protein XAP-5107.130.5903
43 Mapoly0084s0054 [K03029] 26S proteasome regulatory subunit N10; [PF02809] Ubiquitin interaction motif; [PF13519] von Willebrand factor type A domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR10223] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; [GO:0008540] proteasome regulatory particle, base subcomplex; [KOG2884] 26S proteasome regulatory complex, subunit RPN10/PSMD4108.190.5906
44 Mapoly0002s0209 [PF04413] 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); [K02527] 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.-.-.-]; [PTHR23417] 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; [2.-.-.-] Transferases.116.960.5401
45 Mapoly0041s0133 [PF01426] BAH domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR117.540.5667
46 Mapoly0071s0007 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [K09494] T-complex protein 1 subunit beta; [KOG0363] Chaperonin complex component, TCP-1 beta subunit (CCT2)117.690.5826
47 Mapoly0052s0054 [KOG0362] Chaperonin complex component, TCP-1 theta subunit (CCT8); [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family120.500.5741
48 Mapoly0023s0117 [PTHR10139] DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A; [PF04152] Mre11 DNA-binding presumed domain; [KOG2310] DNA repair exonuclease MRE11; [GO:0006259] DNA metabolic process; [PF00149] Calcineurin-like phosphoesterase; [GO:0006302] double-strand break repair; [GO:0016787] hydrolase activity; [GO:0030145] manganese ion binding; [GO:0005634] nucleus; [GO:0004527] exonuclease activity; [K10865] double-strand break repair protein MRE11; [GO:0004519] endonuclease activity124.100.5850
49 Mapoly0022s0110 [GO:0005737] cytoplasm; [GO:0006974] response to DNA damage stimulus; [GO:0006281] DNA repair; [PF03652] Uncharacterised protein family (UPF0081); [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006310] DNA recombination126.380.5187
50 Mapoly0002s0091 [PF03357] Snf7; [KOG3230] Vacuolar assembly/sorting protein DID4; [PTHR10476] CHARGED MULTIVESICULAR BODY PROTEIN; [GO:0015031] protein transport; [PTHR10476:SF4] CHARGED MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING PROTEIN 2A)(CHMP2A)(VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 2-1)(VPS2-1)(HVPS2-1)(PUTATIVE BREAST ADENOCARCINOMA MARKER BC-2)127.490.5574
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