Guide Gene

Gene ID
Mapoly0056s0134
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR12197] SET AND MYND DOMAIN CONTAINING; [PF01753] MYND finger

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0056s0134 [PTHR12197] SET AND MYND DOMAIN CONTAINING; [PF01753] MYND finger 0.00 1.0000
1 Mapoly0024s0037 [K13151] snurportin-1; [KOG3132] m3G-cap-specific nuclear import receptor (Snurportin1); [PTHR13403:SF6] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1); [PTHR13403] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1)1.000.7384
2 Mapoly0063s0035 -3.160.6567
3 Mapoly0073s0077 [PF07719] Tetratricopeptide repeat; [KOG1174] Anaphase-promoting complex (APC), subunit 7; [GO:0005515] protein binding; [PF13181] Tetratricopeptide repeat; [PTHR12558:SF8] ANAPHASE PROMOTING COMPLEX SUBUNIT 7; [PTHR12558] CELL DIVISION CYCLE 16,23,274.240.6931
4 Mapoly0015s0121 [PTHR31307] FAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain4.800.6248
5 Mapoly0036s0004 [GO:0034477] U6 snRNA 3'-end processing; [PTHR13522] UNCHARACTERIZED; [KOG3102] Uncharacterized conserved protein; [GO:0004518] nuclease activity; [PF09749] Uncharacterised conserved protein8.000.6464
6 Mapoly0013s0118 [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [K05539] tRNA-dihydrouridine synthase A [EC:1.-.-.-]; [PF01207] Dihydrouridine synthase (Dus); [KOG2335] tRNA-dihydrouridine synthase; [GO:0008033] tRNA processing; [PTHR11082:SF29] NITROGEN REGULATION PROTEIN NIFR3-RELATED; [PTHR11082] TRNA-DIHYDROURIDINE SYNTHASE; [GO:0017150] tRNA dihydrouridine synthase activity; [1.-.-.-] Oxidoreductases.8.120.6003
7 Mapoly0032s0014 [KOG1529] Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase; [PF00581] Rhodanese-like domain; [PTHR11364] THIOSULFATE SULFERTANSFERASE8.490.6409
8 Mapoly0039s0073 -9.490.6652
9 Mapoly0014s0024 -14.250.6076
10 Mapoly0096s0012 [PF12937] F-box-like; [GO:0005515] protein binding14.350.6996
11 Mapoly0005s0075 [GO:0055114] oxidation-reduction process; [GO:0009073] aromatic amino acid family biosynthetic process; [PF01959] 3-dehydroquinate synthase (EC 4.6.1.3); [GO:0016491] oxidoreductase activity; [GO:0003856] 3-dehydroquinate synthase activity15.100.6891
12 Mapoly0002s0230 [GO:0003677] DNA binding; [GO:0000784] nuclear chromosome, telomeric region; [PF02765] Telomeric single stranded DNA binding POT1/CDC13; [GO:0043047] single-stranded telomeric DNA binding; [PTHR14513] PROTECTION OF TELOMERES 1; [KOG4757] Predicted telomere binding protein; [GO:0000723] telomere maintenance16.580.6862
13 Mapoly0016s0052 [K10752] histone-binding protein RBBP4; [GO:0005515] protein binding; [KOG0264] Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1; [PTHR22850] WD40 REPEAT FAMILY; [PF12265] Histone-binding protein RBBP4 or subunit C of CAF1 complex; [PF00400] WD domain, G-beta repeat16.910.6521
14 Mapoly0021s0024 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE18.970.5932
15 Mapoly0101s0047 [KOG2084] Predicted histone tail methylase containing SET domain; [GO:0005515] protein binding; [PF00856] SET domain; [K11426] SET and MYND domain-containing protein; [PTHR12197] SET AND MYND DOMAIN CONTAINING; [PF01753] MYND finger19.750.6132
16 Mapoly0100s0056 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [GO:0004659] prenyltransferase activity; [K06125] 4-hydroxybenzoate hexaprenyltransferase [EC:2.5.1.-]; [GO:0016021] integral to membrane; [PTHR11048:SF7] SUBFAMILY NOT NAMED; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family; [KOG1381] Para-hydroxybenzoate-polyprenyl transferase20.490.6476
17 Mapoly0003s0234 [PTHR23139] RNA-BINDING PROTEIN; [K13154] U11/U12 small nuclear ribonucleoprotein 31 kDa protein; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [KOG4206] Spliceosomal protein snRNP-U1A/U2B; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)20.930.6845
18 Mapoly0113s0030 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [K14440] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12]; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [3.6.4.12] DNA helicase.; [KOG1000] Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily; [PF00271] Helicase conserved C-terminal domain; [PTHR10799:SF43] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 121.170.6688
19 Mapoly0080s0043 [PTHR11895] AMIDASE; [GO:0016884] carbon-nitrogen ligase activity, with glutamine as amido-N-donor; [KOG1212] Amidases; [PF01425] Amidase21.210.5517
20 Mapoly0078s0007 [K13983] putative helicase MOV10L1 [EC:3.6.4.13]; [KOG1804] RNA helicase; [3.6.4.13] RNA helicase.; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain21.980.6311
21 Mapoly0091s0004 [1.2.1.16] Succinate-semialdehyde dehydrogenase (NAD(P)(+)).; [K00135] succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]; [GO:0055114] oxidation-reduction process; [KOG2451] Aldehyde dehydrogenase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR11699] ALDEHYDE DEHYDROGENASE-RELATED; [PF00171] Aldehyde dehydrogenase family; [PTHR11699:SF49] SUCCINATE SEMIALDEHYDE DEHYDROGENASE23.960.6733
22 Mapoly0059s0052 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding31.940.6314
23 Mapoly0045s0077 [PTHR11807:SF2] CELL CYCLE PROTEIN MESJ; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PTHR11807] ATPASES OF THE PP SUPERFAMILY-RELATED; [GO:0016879] ligase activity, forming carbon-nitrogen bonds; [PF01171] PP-loop family; [GO:0008033] tRNA processing35.670.6524
24 Mapoly0014s0045 [K13120] protein FAM32A; [PTHR13282] UNCHARACTERIZED; [KOG3410] Conserved alpha-helical protein; [PF08555] Eukaryotic family of unknown function (DUF1754); [PTHR13282:SF6] SUBFAMILY NOT NAMED36.950.5294
25 Mapoly0042s0010 [GO:0008168] methyltransferase activity; [K07056] TatD-related deoxyribonuclease; [PF00590] Tetrapyrrole (Corrin/Porphyrin) Methylases; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [GO:0008152] metabolic process; [PTHR21091:SF18] S-ADENOSYLMETHIONINE-DEPENDENT METHYTRANSFERASE39.190.5763
26 Mapoly0147s0011 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family39.600.4952
27 Mapoly0058s0068 [GO:0003677] DNA binding; [GO:0006284] base-excision repair; [PTHR10359] A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [PTHR10359:SF16] ENDONUCLEASE III; [KOG1921] Endonuclease III; [PF00633] Helix-hairpin-helix motif; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K10773] endonuclease III [EC:4.2.99.18]40.350.5946
28 Mapoly0001s0282 [PTHR20836] DIHYDRODIPICOLINATE REDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0070402] NADPH binding; [PF01113] Dihydrodipicolinate reductase, N-terminus; [K00215] dihydrodipicolinate reductase [EC:1.3.1.26]; [PF05173] Dihydrodipicolinate reductase, C-terminus; [1.3.1.26] Transferred entry: 1.17.1.8.; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0008839] 4-hydroxy-tetrahydrodipicolinate reductase41.580.6369
29 Mapoly0026s0010 [PTHR17614] ZINC FINGER-CONTAINING; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding47.770.6479
30 Mapoly0143s0016 -48.730.6140
31 Mapoly0060s0006 [GO:0016021] integral to membrane; [PF03124] EXS family; [PTHR10783] XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED; [PTHR10783:SF9] EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN52.800.6423
32 Mapoly0001s0029 [PF01979] Amidohydrolase family; [3.5.2.3] Dihydroorotase.; [PTHR11647] AMINOHYDROLASE; [K01465] dihydroorotase [EC:3.5.2.3]; [GO:0016787] hydrolase activity; [KOG2902] Dihydroorotase54.330.5022
33 Mapoly0010s0001 [PF00397] WW domain; [GO:0005515] protein binding; [KOG0144] RNA-binding protein CUGBP1/BRUNO (RRM superfamily); [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)55.500.6547
34 Mapoly0052s0099 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR21428] FAMILY NOT NAMED; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PF05983] MED7 protein; [KOG0570] Transcriptional coactivator58.860.5632
35 Mapoly0054s0054 [KOG3276] Uncharacterized conserved protein, contains YggU domain; [PTHR13420:SF1] gb def: y66d12a.8.p [caenorhabditis elegans]; [K09131] hypothetical protein; [PTHR13420] UNCHARACTERIZED; [PF02594] Uncharacterised ACR, YggU family COG187262.030.5526
36 Mapoly0131s0005 [PF11493] Thylakoid soluble phosphoprotein TSP967.160.6305
37 Mapoly0120s0019 [PF13855] Leucine rich repeat; [GO:0005515] protein binding; [PTHR23155] LEUCINE-RICH REPEAT-CONTAINING PROTEIN; [GO:0043531] ADP binding; [PF00931] NB-ARC domain68.590.5071
38 Mapoly0004s0045 -70.400.5806
39 Mapoly0047s0096 [PTHR24089:SF51] SUBFAMILY NOT NAMED; [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [K03454] mitochondrial carrier protein, MC family; [KOG0760] Mitochondrial carrier protein MRS3/479.370.5979
40 Mapoly0097s0033 [PTHR10870] CELL CYCLE CHECKPOINT PROTEIN RAD1; [KOG3194] Checkpoint 9-1-1 complex, RAD1 component; [PF02144] Repair protein Rad1/Rec1/Rad17; [GO:0005634] nucleus; [K02830] cell cycle checkpoint protein [EC:3.1.11.2]; [GO:0006281] DNA repair; [3.1.11.2] Exodeoxyribonuclease III.80.590.6002
41 Mapoly0123s0035 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [KOG3201] Uncharacterized conserved protein81.720.5712
42 Mapoly0021s0158 [GO:0008168] methyltransferase activity; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [PTHR11006:SF4] PROTEIN ARGININE N-METHYLTRANSFERASE 7; [GO:0006479] protein methylation82.810.5694
43 Mapoly0133s0014 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN84.000.5759
44 Mapoly0156s0014 [GO:0006355] regulation of transcription, DNA-dependent; [PF10483] Elongator subunit Iki1; [PTHR15641] FAMILY NOT NAMED; [PTHR15641:SF1] RETINOIC ACID INDUCED GENE-RELATED84.120.5183
45 Mapoly0053s0043 [PTHR10410:SF2] BRCA1/BRCA2-CONTAINING COMPLEX SUBUNIT 3; [GO:0005515] protein binding; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [K11864] BRCA1/BRCA2-containing complex subunit 3; [KOG1555] 26S proteasome regulatory complex, subunit RPN11; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED84.330.4241
46 Mapoly0063s0009 -88.180.5473
47 Mapoly0139s0008 [PF14929] TAF RNA Polymerase I subunit A88.660.6071
48 Mapoly0062s0042 [GO:0015684] ferrous iron transport; [PF02421] Ferrous iron transport protein B; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [GO:0015093] ferrous iron transmembrane transporter activity; [GO:0016021] integral to membrane; [PTHR11702:SF4] NUCLEOLAR GTP-BINDING PROTEIN 1; [PF06858] Nucleolar GTP-binding protein 1 (NOG1); [GO:0005525] GTP binding89.080.5628
49 Mapoly0001s0348 [KOG1342] Histone deacetylase complex, catalytic component RPD3; [PF00850] Histone deacetylase domain; [PTHR10625] HISTONE DEACETYLASE91.910.6024
50 Mapoly0072s0033 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family92.630.5938
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