Guide Gene

Gene ID
Mapoly0010s0001
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF00397] WW domain; [GO:0005515] protein binding; [KOG0144] RNA-binding protein CUGBP1/BRUNO (RRM superfamily); [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0010s0001 [PF00397] WW domain; [GO:0005515] protein binding; [KOG0144] RNA-binding protein CUGBP1/BRUNO (RRM superfamily); [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00 1.0000
1 Mapoly0021s0162 [PF07969] Amidohydrolase family; [PTHR22642] IMIDAZOLONEPROPIONASE1.000.8933
2 Mapoly0091s0004 [1.2.1.16] Succinate-semialdehyde dehydrogenase (NAD(P)(+)).; [K00135] succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]; [GO:0055114] oxidation-reduction process; [KOG2451] Aldehyde dehydrogenase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR11699] ALDEHYDE DEHYDROGENASE-RELATED; [PF00171] Aldehyde dehydrogenase family; [PTHR11699:SF49] SUCCINATE SEMIALDEHYDE DEHYDROGENASE1.410.8663
3 Mapoly0026s0010 [PTHR17614] ZINC FINGER-CONTAINING; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding1.730.8631
4 Mapoly0101s0034 -2.240.8239
5 Mapoly0096s0012 [PF12937] F-box-like; [GO:0005515] protein binding3.460.8120
6 Mapoly0060s0006 [GO:0016021] integral to membrane; [PF03124] EXS family; [PTHR10783] XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED; [PTHR10783:SF9] EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN5.660.8103
7 Mapoly0048s0015 [K00721] dolichol-phosphate mannosyltransferase [EC:2.4.1.83]; [PTHR10859] GLYCOSYL TRANSFERASE; [2.4.1.83] Dolichyl-phosphate beta-D-mannosyltransferase.; [KOG2978] Dolichol-phosphate mannosyltransferase; [PF00535] Glycosyl transferase family 26.000.8388
8 Mapoly0016s0073 [PTHR13723] ADAMTS (A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS) PROTEASE11.620.8063
9 Mapoly0032s0014 [KOG1529] Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase; [PF00581] Rhodanese-like domain; [PTHR11364] THIOSULFATE SULFERTANSFERASE13.820.6883
10 Mapoly0039s0073 -22.720.7108
11 Mapoly0065s0018 [GO:0009058] biosynthetic process; [PF01467] Cytidylyltransferase; [GO:0003824] catalytic activity; [PTHR10695] DEPHOSPHO-COA KINASE-RELATED24.250.8110
12 Mapoly0137s0015 -26.310.6942
13 Mapoly0134s0007 [PF14108] Domain of unknown function (DUF4281)26.500.8006
14 Mapoly0011s0027 [K01814] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]; [PTHR21169] 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE; [GO:0000105] histidine biosynthetic process; [5.3.1.16] 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase.; [GO:0003949] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; [KOG3055] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; [PF00977] Histidine biosynthesis protein; [PTHR21169:SF0] SUBFAMILY NOT NAMED32.310.7682
15 Mapoly0131s0005 [PF11493] Thylakoid soluble phosphoprotein TSP932.830.7466
16 Mapoly0078s0008 [K03147] thiamine biosynthesis protein ThiC; [PF01964] ThiC family; [GO:0009228] thiamine biosynthetic process; [GO:0051536] iron-sulfur cluster binding; [PTHR30557] THIAMINE BIOSYNTHESIS PROTEIN THIC; [PF13667] ThiC-associated domain36.330.7603
17 Mapoly0216s0009 [PF05542] Protein of unknown function (DUF760)37.080.7572
18 Mapoly0057s0093 [GO:0005515] protein binding; [PTHR12197:SF75] PUTATIVE UNCHARACTERIZED PROTEIN; [PF00856] SET domain; [PTHR12197] SET AND MYND DOMAIN CONTAINING37.600.7275
19 Mapoly0004s0045 -40.250.6971
20 Mapoly0054s0038 [3.4.11.9] Xaa-Pro aminopeptidase.; [GO:0016787] hydrolase activity; [K01262] Xaa-Pro aminopeptidase [EC:3.4.11.9]; [PF00557] Metallopeptidase family M24; [KOG2413] Xaa-Pro aminopeptidase; [PF01321] Creatinase/Prolidase N-terminal domain; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)42.450.7699
21 Mapoly0135s0041 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [KOG1762] 60s acidic ribosomal protein P1; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [K02942] large subunit ribosomal protein LP1; [PF00428] 60s Acidic ribosomal protein43.010.8050
22 Mapoly0011s0077 [PTHR23419:SF0] SUBFAMILY NOT NAMED; [KOG3338] Divalent cation tolerance-related protein; [GO:0010038] response to metal ion; [PF03091] CutA1 divalent ion tolerance protein; [K03926] periplasmic divalent cation tolerance protein; [PTHR23419] DIVALENT CATION TOLERANCE CUTA-RELATED44.400.7784
23 Mapoly0127s0012 [PTHR13557:SF1] gb def: hypothetical protein xp_167260 [homo sapiens]; [PTHR13557] UNCHARACTERIZED44.500.8027
24 Mapoly0174s0020 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain; [KOG1801] tRNA-splicing endonuclease positive effector (SEN1)44.870.7707
25 Mapoly0003s0256 [GO:0005840] ribosome; [K02912] large subunit ribosomal protein L32e; [KOG0878] 60S ribosomal protein L32; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N; [PF01655] Ribosomal protein L3246.310.8047
26 Mapoly0001s0029 [PF01979] Amidohydrolase family; [3.5.2.3] Dihydroorotase.; [PTHR11647] AMINOHYDROLASE; [K01465] dihydroorotase [EC:3.5.2.3]; [GO:0016787] hydrolase activity; [KOG2902] Dihydroorotase48.830.5664
27 Mapoly0059s0023 [PTHR23365] POLY-A BINDING PROTEIN 2; [KOG4208] Nucleolar RNA-binding protein NIFK; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)52.320.7891
28 Mapoly0005s0062 [GO:0005840] ribosome; [PF01158] Ribosomal protein L36e; [GO:0003735] structural constituent of ribosome; [K02920] large subunit ribosomal protein L36e; [GO:0005622] intracellular; [KOG3452] 60S ribosomal protein L36; [PTHR10114] 60S RIBOSOMAL PROTEIN L36; [GO:0006412] translation52.650.7941
29 Mapoly0003s0023 -53.950.7627
30 Mapoly0052s0016 [PF15341] Ribosome biogenesis protein SLX954.220.6653
31 Mapoly0056s0134 [PTHR12197] SET AND MYND DOMAIN CONTAINING; [PF01753] MYND finger55.500.6547
32 Mapoly0009s0032 [PF04278] Tic22-like family56.210.7444
33 Mapoly0028s0122 [PF01979] Amidohydrolase family; [KOG3968] Atrazine chlorohydrolase/guanine deaminase; [GO:0016787] hydrolase activity; [PTHR11271] CHLOROHYDROLASE FAMILY PROTEINS; [PTHR11271:SF7] CHLOROHYDROLASE FAMILY PROTEIN58.740.6318
34 Mapoly0006s0223 [PF01987] Mitochondrial biogenesis AIM24; [PTHR31801] FAMILY NOT NAMED59.160.7782
35 Mapoly0153s0035 [PF01381] Helix-turn-helix; [GO:0043565] sequence-specific DNA binding; [K03627] putative transcription factor; [KOG3398] Transcription factor MBF1; [PTHR10245] ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1); [PF08523] Multiprotein bridging factor 160.750.7938
36 Mapoly0094s0077 -60.830.7497
37 Mapoly0028s0123 [PF01494] FAD binding domain; [KOG2614] Kynurenine 3-monooxygenase and related flavoprotein monooxygenases; [PTHR13789] MONOOXYGENASE61.190.6503
38 Mapoly0028s0141 [GO:0003723] RNA binding; [KOG2523] Predicted RNA-binding protein with PUA domain; [PF01472] PUA domain; [PTHR22798] MCT-1 PROTEIN; [K07575] PUA domain protein61.320.7850
39 Mapoly0026s0131 [GO:0005840] ribosome; [PF01907] Ribosomal protein L37e; [K02922] large subunit ribosomal protein L37e; [PTHR10768] 60S RIBOSOMAL PROTEIN L37; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3475] 60S ribosomal protein L37; [GO:0006412] translation62.990.7892
40 Mapoly0025s0084 -63.170.6795
41 Mapoly0064s0119 [GO:0005840] ribosome; [GO:0005515] protein binding; [K02927] large subunit ribosomal protein L40e; [GO:0003735] structural constituent of ribosome; [KOG0003] Ubiquitin/60s ribosomal protein L40 fusion; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN; [GO:0006412] translation; [PF01020] Ribosomal L40e family63.360.7857
42 Mapoly0011s0080 [KOG2315] Predicted translation initiation factor related to eIF-3a; [PTHR13227] NUCLEASE-RELATED; [PF08662] Eukaryotic translation initiation factor eIF2A63.870.7270
43 Mapoly0014s0052 -64.450.7734
44 Mapoly0021s0158 [GO:0008168] methyltransferase activity; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [PTHR11006:SF4] PROTEIN ARGININE N-METHYLTRANSFERASE 7; [GO:0006479] protein methylation65.760.6884
45 Mapoly0038s0097 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG0397] 60S ribosomal protein L11; [PF00281] Ribosomal protein L5; [GO:0006412] translation; [PTHR11994] 60S RIBOSOMAL PROTEIN L11-RELATED; [PF00673] ribosomal L5P family C-terminus66.830.7838
46 Mapoly0003s0191 [PF04882] Peroxin-3; [GO:0007031] peroxisome organization; [K13336] peroxin-3; [GO:0005779] integral to peroxisomal membrane; [KOG4444] Peroxisomal assembly protein PEX367.040.6780
47 Mapoly0006s0003 -67.750.6618
48 Mapoly0012s0181 [GO:0005840] ribosome; [PTHR12010] 40S RIBOSOMAL PROTEIN S29; [KOG3506] 40S ribosomal protein S29; [K02980] small subunit ribosomal protein S29e; [PF00253] Ribosomal protein S14p/S29e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation68.090.7853
49 Mapoly0095s0001 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation69.040.7839
50 Mapoly0052s0059 [GO:0005801] cis-Golgi network; [PF04099] Sybindin-like family; [KOG3368] Transport protein particle (TRAPP) complex subunit; [PTHR23249] SYNBINDIN; [GO:0006888] ER to Golgi vesicle-mediated transport72.500.7810
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