Guide Gene

Gene ID
Mapoly0040s0028
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR13681] FAMILY NOT NAMED; [PF08585] Domain of unknown function (DUF1767)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0040s0028 [PTHR13681] FAMILY NOT NAMED; [PF08585] Domain of unknown function (DUF1767) 0.00 1.0000
1 Mapoly0075s0087 [PTHR31576] FAMILY NOT NAMED14.900.7281
2 Mapoly0020s0127 [GO:0005515] protein binding; [PTHR14344] WD REPEAT PROTEIN; [KOG0974] WD-repeat protein WDR6, WD repeat superfamily; [PF00400] WD domain, G-beta repeat18.170.6961
3 Mapoly0045s0050 [KOG1881] Anion exchanger adaptor protein Kanadaptin, contains FHA domain; [GO:0005515] protein binding; [PTHR23308:SF2] SMAD NUCLEAR INTERACTING PROTEIN 1; [PF00498] FHA domain; [PTHR23308] NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-118.490.6751
4 Mapoly0100s0030 -23.280.7079
5 Mapoly0023s0060 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0004000] adenosine deaminase activity; [PTHR10910] EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN; [PF02137] Adenosine-deaminase (editase) domain30.890.6659
6 Mapoly0027s0070 [KOG2126] Glycosylphosphatidylinositol anchor synthesis protein; [PF01663] Type I phosphodiesterase / nucleotide pyrophosphatase; [PTHR23071] PHOSPHATIDYLINOSITOL GLYCAN; [GO:0003824] catalytic activity37.110.6529
7 Mapoly0008s0248 [KOG0265] U5 snRNP-specific protein-like factor and related proteins; [GO:0005515] protein binding; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat45.690.6104
8 Mapoly0027s0115 [PF12656] DExH-box splicing factor binding site; [PTHR15818] G PATCH AND KOW-CONTAINING; [PTHR15818:SF2] SUBFAMILY NOT NAMED; [K13101] G patch domain and KOW motifs-containing protein46.050.6682
9 Mapoly0044s0018 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [KOG0926] DEAH-box RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold47.120.6802
10 Mapoly0007s0016 -48.500.6440
11 Mapoly0008s0022 -51.490.6629
12 Mapoly0048s0059 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [KOG1802] RNA helicase nonsense mRNA reducing factor (pNORF1); [PF13086] AAA domain; [PF13087] AAA domain52.310.6087
13 Mapoly0022s0105 [PF00867] XPG I-region; [PF00752] XPG N-terminal domain; [GO:0006281] DNA repair; [KOG2519] 5'-3' exonuclease; [GO:0004518] nuclease activity; [PTHR11081] XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY55.860.6668
14 Mapoly0122s0038 [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis; [PTHR23327:SF0] SUBFAMILY NOT NAMED58.480.6795
15 Mapoly0151s0004 [GO:0008168] methyltransferase activity; [PTHR12176] UNCHARACTERIZED; [KOG1271] Methyltransferases; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process63.970.6463
16 Mapoly0043s0035 [KOG4283] Transcription-coupled repair protein CSA, contains WD40 domain; [GO:0005515] protein binding; [K10570] DNA excision repair protein ERCC-8; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat64.420.6435
17 Mapoly0080s0038 [PTHR14005:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [KOG2072] Translation initiation factor 3, subunit a (eIF-3a); [PF01399] PCI domain; [PTHR14005] EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT; [K03254] translation initiation factor eIF-3 subunit 10; [GO:0005852] eukaryotic translation initiation factor 3 complex68.690.6584
18 Mapoly0034s0125 [PF08243] SPT2 chromatin protein; [PTHR22691] YEAST SPT2-RELATED71.440.6420
19 Mapoly0027s0150 [PF04031] Las1-like; [PTHR15002] UNCHARACTERIZED71.500.5835
20 Mapoly0125s0046 [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [KOG1800] Ferredoxin/adrenodoxin reductase; [1.18.1.2] Ferredoxin--NADP(+) reductase.; [K00528] ferredoxin--NADP+ reductase [EC:1.18.1.2]74.500.6577
21 Mapoly0066s0113 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [K13127] RING finger protein 113A; [KOG1813] Predicted E3 ubiquitin ligase; [PTHR12930] ZINC FINGER PROTEIN 183; [GO:0046872] metal ion binding; [PF13920] Zinc finger, C3HC4 type (RING finger)82.150.6583
22 Mapoly0009s0169 [GO:0006355] regulation of transcription, DNA-dependent; [PF04494] WD40 associated region in TFIID subunit; [GO:0005515] protein binding; [K03130] transcription initiation factor TFIID subunit 5; [GO:0005634] nucleus; [PTHR19879] TRANSCRIPTION INITIATION FACTOR TFIID; [KOG0263] Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA); [PTHR19879:SF1] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat85.560.6653
23 Mapoly0005s0241 [PF05097] Protein of unknown function (DUF688)88.140.5089
24 Mapoly0138s0006 [GO:0070985] TFIIK complex; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016538] cyclin-dependent protein serine/threonine kinase regulator activity; [GO:0019901] protein kinase binding; [PTHR10026:SF8] CYCLIN H; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [KOG2496] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit; [GO:0006351] transcription, DNA-dependent; [K06634] cyclin H; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity89.260.6382
25 Mapoly0007s0068 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [PF02984] Cyclin, C-terminal domain; [GO:0005634] nucleus; [KOG0834] CDK9 kinase-activating protein cyclin T; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity89.330.6605
26 Mapoly0021s0161 [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PF08152] GUCT (NUC152) domain; [GO:0005634] nucleus; [PTHR24031:SF136] PREDICTED PROTEIN (FRAGMENT); [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding93.280.5931
27 Mapoly0059s0089 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR11472:SF1] DNA REPAIR HELICASE RAD3/XP-D; [KOG1131] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, 5'-3' helicase subunit RAD3; [PF06777] Protein of unknown function (DUF1227); [GO:0008026] ATP-dependent helicase activity; [K10844] DNA excision repair protein ERCC-2 [EC:3.6.4.12]; [GO:0016787] hydrolase activity; [PF04851] Type III restriction enzyme, res subunit; [PF13307] Helicase C-terminal domain; [3.6.4.12] DNA helicase.; [PF06733] DEAD_2; [GO:0005634] nucleus; [PTHR11472] DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [GO:0004003] ATP-dependent DNA helicase activity; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides94.490.6564
28 Mapoly0007s0198 [GO:0003677] DNA binding; [GO:0006351] transcription, DNA-dependent; [PTHR10102:SF1] DNA-DIRECTED RNA POLYMERASE; [PTHR10102] DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; [GO:0003899] DNA-directed RNA polymerase activity; [PF14700] DNA-directed RNA polymerase N-terminal; [2.7.7.6] DNA-directed RNA polymerase.; [PF00940] DNA-dependent RNA polymerase; [K10908] DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]; [KOG1038] Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41, provides primers for DNA replication-initiation99.140.6512
29 Mapoly0033s0099 [PF00929] Exonuclease; [KOG2248] 3'-5' exonuclease; [PTHR12801:SF45] EXONUCLEASE; [PTHR12801] EXONUCLEASE100.080.6244
30 Mapoly0069s0045 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0003910] DNA ligase (ATP) activity; [PF04679] ATP dependent DNA ligase C terminal region; [PTHR10459] DNA LIGASE; [PF01068] ATP dependent DNA ligase domain; [GO:0006281] DNA repair; [PF12706] Beta-lactamase superfamily domain; [PF04675] DNA ligase N terminus; [PF07522] DNA repair metallo-beta-lactamase; [GO:0006310] DNA recombination; [KOG0967] ATP-dependent DNA ligase I100.260.6397
31 Mapoly0005s0239 [PF04112] Mak10 subunit, NatC N(alpha)-terminal acetyltransferase; [PTHR21373] GLUCOSE REPRESSIBLE PROTEIN MAK10; [KOG2343] Glucose-repressible protein and related proteins105.070.6506
32 Mapoly0027s0145 [PF01902] ATP-binding region; [KOG2316] Predicted ATPase (PP-loop superfamily); [PTHR12196] DOMAIN OF UNKNOWN FUNCTION 71 (DUF71)-CONTAINING PROTEIN; [PF01042] Endoribonuclease L-PSP105.070.6447
33 Mapoly0054s0116 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [GO:0003676] nucleic acid binding106.130.6375
34 Mapoly0172s0015 [PTHR13471] TETRATRICOPEPTIDE-LIKE HELICAL; [PF08424] NRDE-2, necessary for RNA interference109.120.6489
35 Mapoly0025s0095 [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PTHR11390:SF22] DNA TOPOISOMERASE I; [PF01751] Toprim domain; [PF13368] Topoisomerase C-terminal repeat; [GO:0006265] DNA topological change; [KOG1956] DNA topoisomerase III alpha; [PF01396] Topoisomerase DNA binding C4 zinc finger; [GO:0005694] chromosome; [GO:0003916] DNA topoisomerase activity; [PTHR11390] PROKARYOTIC DNA TOPOISOMERASE; [PF01131] DNA topoisomerase114.020.6259
36 Mapoly0107s0037 [GO:0006260] DNA replication; [PF14520] Helix-hairpin-helix domain; [PF01653] NAD-dependent DNA ligase adenylation domain; [PF03119] NAD-dependent DNA ligase C4 zinc finger domain; [PF00533] BRCA1 C Terminus (BRCT) domain; [PF03120] NAD-dependent DNA ligase OB-fold domain; [PF12826] Helix-hairpin-helix motif; [GO:0006281] DNA repair; [PTHR11107] BRCT DOMAIN-CONTAINING PROTEIN; [PTHR11107:SF11] SUBFAMILY NOT NAMED; [GO:0003911] DNA ligase (NAD+) activity116.960.6511
37 Mapoly0012s0035 [PTHR14150] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14; [K14567] U3 small nucleolar RNA-associated protein 14; [PF04615] Utp14 protein; [KOG2172] Uncharacterized conserved protein; [GO:0006364] rRNA processing; [PTHR14150:SF12] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14; [GO:0032040] small-subunit processome117.240.6389
38 Mapoly0170s0019 [PF07719] Tetratricopeptide repeat; [PTHR22767:SF3] PEPTIDE ALPHA-N-ACETYLTRANSFERASE-RELATED; [KOG2053] Mitochondrial inheritance and actin cytoskeleton organization protein; [PF09797] N-acetyltransferase B complex (NatB) non catalytic subunit; [PTHR22767] N-TERMINAL ACETLYTRANSFERASE-RELATED121.330.6284
39 Mapoly0107s0007 [PF06839] GRF zinc finger; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [K10772] AP endonuclease 2 [EC:4.2.99.18]; [GO:0008270] zinc ion binding; [GO:0006281] DNA repair; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE124.520.6131
40 Mapoly0164s0017 [PTHR12181] LIPIN127.280.5741
41 Mapoly0156s0022 [PTHR11226] UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE; [GO:0006486] protein glycosylation; [PF06427] UDP-glucose:Glycoprotein Glucosyltransferase; [K11718] UDP-glucose:glycoprotein glucosyltransferase [EC:2.4.1.-]; [GO:0003980] UDP-glucose:glycoprotein glucosyltransferase activity; [PTHR11226:SF0] SUBFAMILY NOT NAMED; [KOG1879] UDP-glucose:glycoprotein glucosyltransferase; [2.4.1.-] Hexosyltransferases.127.440.6113
42 Mapoly0012s0095 [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PF02810] SEC-C motif; [PF02338] OTU-like cysteine protease128.120.6264
43 Mapoly0025s0012 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [KOG0058] Peptide exporter, ABC superfamily; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [K02021] putative ABC transport system ATP-binding protein; [PF00005] ABC transporter128.570.5668
44 Mapoly0102s0034 [GO:0008168] methyltransferase activity; [PTHR14741] S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED; [2.1.1.-] Methyltransferases.; [GO:0009452] 7-methylguanosine RNA capping; [KOG2730] Methylase; [K14292] trimethylguanosine synthase [EC:2.1.1.-]; [PF09445] RNA cap guanine-N2 methyltransferase; [GO:0001510] RNA methylation132.950.6357
45 Mapoly0001s0540 [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain; [KOG1230] Protein containing repeated kelch motifs; [PF13422] Domain of unknown function (DUF4110)133.420.6294
46 Mapoly0191s0005 [2.3.1.179] Beta-ketoacyl-[acyl-carrier-protein] synthase II.; [PTHR11712] POLYKETIDE SYNTHASE-RELATED; [PF00109] Beta-ketoacyl synthase, N-terminal domain; [K09458] 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]; [PF02801] Beta-ketoacyl synthase, C-terminal domain; [KOG1394] 3-oxoacyl-(acyl-carrier-protein) synthase (I and II)133.550.6298
47 Mapoly0003s0305 [PF13481] AAA domain; [PF13662] Toprim domain; [GO:0003697] single-stranded DNA binding; [PTHR12873] T7-LIKE MITOCHONDRIAL DNA HELICASE; [KOG2373] Predicted mitochondrial DNA helicase twinkle; [GO:0043139] 5'-3' DNA helicase activity134.090.6177
48 Mapoly0066s0087 [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF09382] RQC domain; [KOG0353] ATP-dependent DNA helicase; [3.6.4.12] DNA helicase.; [K10899] ATP-dependent DNA helicase Q1 [EC:3.6.4.12]; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [GO:0005622] intracellular; [GO:0003676] nucleic acid binding; [GO:0043140] ATP-dependent 3'-5' DNA helicase activity; [PF00570] HRDC domain145.190.6037
49 Mapoly0009s0016 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006370] 7-methylguanosine mRNA capping; [PF01331] mRNA capping enzyme, catalytic domain; [PTHR10367] MRNA-CAPPING ENZYME; [PF03919] mRNA capping enzyme, C-terminal domain; [2.7.7.50] mRNA guanylyltransferase.; [GO:0006470] protein dephosphorylation; [GO:0004484] mRNA guanylyltransferase activity; [GO:0006397] mRNA processing; [KOG2386] mRNA capping enzyme, guanylyltransferase (alpha) subunit; [K13917] mRNA-capping enzyme [EC:2.7.7.50 3.1.3.33]; [PTHR10367:SF0] MRNA CAPPING ENZYME; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity; [3.1.3.33] Polynucleotide 5'-phosphatase.146.500.6295
50 Mapoly0149s0015 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE; [KOG0730] AAA+-type ATPase147.970.6365
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