Guide Gene
- Gene ID
- Mapoly0033s0093
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR10825:SF5] E3 UBIQUITIN-PROTEIN LIGASE RING2; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding; [PTHR10825] RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0033s0093 [PTHR10825:SF5] E3 UBIQUITIN-PROTEIN LIGASE RING2; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding; [PTHR10825] RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT 0.00 1.0000 1 Mapoly0022s0025 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [KOG0595] Serine/threonine-protein kinase involved in autophagy; [K08269] unc51-like kinase [EC:2.7.11.1]; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [PTHR24348] SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8.83 0.5638 2 Mapoly0037s0054 [PTHR13428] INNER NUCLEAR MEMBRANE PROTEIN MAN1 (LEM DOMAIN CONTAINING PROTEIN); [PTHR13428:SF7] SUBFAMILY NOT NAMED; [PF09402] Man1-Src1p-C-terminal domain; [GO:0005639] integral to nuclear inner membrane 10.58 0.6079 3 Mapoly0016s0052 [K10752] histone-binding protein RBBP4; [GO:0005515] protein binding; [KOG0264] Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1; [PTHR22850] WD40 REPEAT FAMILY; [PF12265] Histone-binding protein RBBP4 or subunit C of CAF1 complex; [PF00400] WD domain, G-beta repeat 13.08 0.6065 4 Mapoly0057s0040 [PTHR21493] CGI-141-RELATED/LIPASE CONTAINING PROTEIN; [PF01764] Lipase (class 3); [GO:0006629] lipid metabolic process 16.25 0.5772 5 Mapoly0057s0042 [PTHR31307] FAMILY NOT NAMED; [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [PF13837] Myb/SANT-like DNA-binding domain 18.33 0.5592 6 Mapoly0080s0034 [2.1.1.43] Histone-lysine N-methyltransferase.; [KOG1082] Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [K11419] histone-lysine N-methyltransferase SUV39H [EC:2.1.1.43]; [PF05033] Pre-SET motif; [GO:0005515] protein binding; [PF00856] SET domain; [GO:0008270] zinc ion binding; [GO:0018024] histone-lysine N-methyltransferase activity; [PTHR22884] SET DOMAIN PROTEINS; [GO:0005634] nucleus; [GO:0034968] histone lysine methylation; [PF13771] PHD-like zinc-binding domain 19.31 0.6201 7 Mapoly0087s0031 [GO:0016791] phosphatase activity; [PTHR10807] MYOTUBULARIN-RELATED; [GO:0016311] dephosphorylation; [KOG4471] Phosphatidylinositol 3-phosphate 3-phosphatase myotubularin MTM1; [PF06602] Myotubularin-like phosphatase domain 22.91 0.5286 8 Mapoly0019s0084 [GO:0030001] metal ion transport; [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [3.6.3.3] Cadmium-exporting ATPase.; [3.6.3.5] Zinc-exporting ATPase.; [PTHR24093] FAMILY NOT NAMED; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding; [K01534] Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]; [KOG0207] Cation transport ATPase; [PF00122] E1-E2 ATPase 26.38 0.5663 9 Mapoly0043s0141 [PTHR13366] MALARIA ANTIGEN-RELATED; [KOG4535] HEAT and armadillo repeat-containing protein; [PF13251] Domain of unknown function (DUF4042); [PF13646] HEAT repeats 28.28 0.5949 10 Mapoly0073s0063 [GO:0016020] membrane; [GO:0005524] ATP binding; [GO:0017038] protein import; [PF07516] SecA Wing and Scaffold domain; [PTHR30612] SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM; [PF07517] SecA DEAD-like domain; [PF01043] SecA preprotein cross-linking domain; [K03070] preprotein translocase subunit SecA 32.86 0.5741 11 Mapoly0023s0060 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0004000] adenosine deaminase activity; [PTHR10910] EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN; [PF02137] Adenosine-deaminase (editase) domain 33.70 0.5994 12 Mapoly0147s0035 [PF08007] Cupin superfamily protein; [PTHR13096] MINA53 (MYC INDUCED NUCLEAR ANTIGEN) 40.07 0.5468 13 Mapoly0005s0121 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG0154] RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains; [PF01585] G-patch domain; [K13094] RNA-binding protein 5/10; [PTHR13948] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [PTHR13948:SF3] RNA-BINDING PROTEIN; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 57.86 0.5820 14 Mapoly0226s0007 [PF00817] impB/mucB/samB family; [2.7.7.7] DNA-directed DNA polymerase.; [GO:0006281] DNA repair; [PF11799] impB/mucB/samB family C-terminal domain; [PTHR11076] DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; [PTHR11076:SF11] DNA POLYMERASE ETA; [GO:0003887] DNA-directed DNA polymerase activity; [GO:0003684] damaged DNA binding; [K03509] DNA polymerase eta subunit [EC:2.7.7.7] 58.40 0.5711 15 Mapoly0103s0058 [KOG1978] DNA mismatch repair protein - MLH2/PMS1/Pms2 family; [GO:0005524] ATP binding; [GO:0032300] mismatch repair complex; [PTHR10073] DNA MISMATCH REPAIR PROTEIN (MLH, PMS, MUTL); [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0006298] mismatch repair; [K10858] DNA mismatch repair protein PMS2; [PTHR10073:SF9] DNA MISMATCH REPAIR PROTEIN PMS1; [PF08676] MutL C terminal dimerisation domain; [GO:0030983] mismatched DNA binding; [PF01119] DNA mismatch repair protein, C-terminal domain 58.50 0.5096 16 Mapoly0104s0010 [PTHR17204:SF5] PRE-MRNA PROCESSING PROTEIN PRP39-RELATED; [K13217] pre-mRNA-processing factor 39; [KOG1258] mRNA processing protein; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF05843] Suppressor of forked protein (Suf); [PTHR17204] PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 61.37 0.5809 17 Mapoly0029s0009 [PF12313] NPR1/NIM1 like defence protein C terminal; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 63.02 0.5529 18 Mapoly0197s0019 [PTHR10751] GUANYLATE BINDING PROTEIN; [PTHR10751:SF2] GUANYLATE BINDING PROTEIN; [PF02263] Guanylate-binding protein, N-terminal domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding; [PF02841] Guanylate-binding protein, C-terminal domain 69.33 0.5665 19 Mapoly0113s0020 [GO:0003677] DNA binding; [PTHR12604:SF2] KU P70 DNA HELICASE; [K10884] ATP-dependent DNA helicase 2 subunit 1; [GO:0042162] telomeric DNA binding; [PF03730] Ku70/Ku80 C-terminal arm; [PF02735] Ku70/Ku80 beta-barrel domain; [PF03731] Ku70/Ku80 N-terminal alpha/beta domain; [GO:0043564] Ku70:Ku80 complex; [GO:0005634] nucleus; [GO:0004003] ATP-dependent DNA helicase activity; [GO:0003676] nucleic acid binding; [KOG2327] DNA-binding subunit of a DNA-dependent protein kinase (Ku70 autoantigen); [PTHR12604] KU AUTOANTIGEN DNA HELICASE; [GO:0003684] damaged DNA binding; [GO:0006303] double-strand break repair via nonhomologous end joining; [PF02037] SAP domain; [GO:0000723] telomere maintenance 71.52 0.5606 20 Mapoly0043s0117 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 72.50 0.5444 21 Mapoly0005s0093 [KOG1883] Cofactor required for Sp1 transcriptional activation, subunit 3; [PF11573] Mediator complex subunit 23; [PTHR12691] FAMILY NOT NAMED 82.91 0.5613 22 Mapoly0015s0190 - 96.23 0.5515 23 Mapoly0052s0068 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 97.34 0.5388 24 Mapoly0086s0067 [GO:0005524] ATP binding; [GO:0032300] mismatch repair complex; [KOG1979] DNA mismatch repair protein - MLH1 family; [PTHR10073] DNA MISMATCH REPAIR PROTEIN (MLH, PMS, MUTL); [PTHR10073:SF12] DNA MISMATCH REPAIR PROTEIN MUTL; [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [K08734] DNA mismatch repair protein MLH1; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [PF01119] DNA mismatch repair protein, C-terminal domain 100.22 0.5377 25 Mapoly0038s0063 [GO:0030904] retromer complex; [GO:0015031] protein transport; [PF03635] Vacuolar protein sorting-associated protein 35; [GO:0042147] retrograde transport, endosome to Golgi; [PTHR13673:SF0] SUBFAMILY NOT NAMED; [PTHR13673] ESOPHAGEAL CANCER ASSOCIATED PROTEIN; [KOG3682] Predicted membrane protein (associated with esophageal cancer in humans) 101.20 0.5534 26 Mapoly0138s0027 [PTHR14845] FAMILY NOT NAMED; [GO:0036064] cilium basal body; [PTHR14845:SF0] SUBFAMILY NOT NAMED 104.00 0.5305 27 Mapoly0070s0037 [PTHR10044] INHIBITOR OF APOPTOSIS; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [K10586] baculoviral IAP repeat-containing protein 6 (apollon) [EC:6.3.2.19]; [KOG0417] Ubiquitin-protein ligase; [GO:0046872] metal ion binding; [PF00179] Ubiquitin-conjugating enzyme 107.47 0.5015 28 Mapoly0021s0014 [PF07719] Tetratricopeptide repeat; [PTHR15502] CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED; [PTHR15502:SF7] SUBFAMILY NOT NAMED 108.23 0.5578 29 Mapoly0061s0069 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PF00249] Myb-like DNA-binding domain; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [GO:0003682] chromatin binding; [PF13921] Myb-like DNA-binding domain 112.16 0.5469 30 Mapoly0122s0014 - 113.14 0.4912 31 Mapoly0063s0058 [PF02170] PAZ domain; [PF08699] Domain of unknown function (DUF1785); [PTHR22891] EUKARYOTIC TRANSLATION INITIATION FACTOR 2C; [PF02171] Piwi domain; [GO:0005515] protein binding; [KOG1041] Translation initiation factor 2C (eIF-2C) and related proteins 116.91 0.4373 32 Mapoly0079s0039 [PF00782] Dual specificity phosphatase, catalytic domain; [K06639] cell division cycle 14 [EC:3.1.3.48]; [PF14671] Dual specificity protein phosphatase, N-terminal half; [GO:0004721] phosphoprotein phosphatase activity; [GO:0006470] protein dephosphorylation; [PTHR23339] TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity; [GO:0007096] regulation of exit from mitosis; [3.1.3.48] Protein-tyrosine-phosphatase.; [KOG1720] Protein tyrosine phosphatase CDC14; [PTHR23339:SF27] DUAL SPECIFICITY PROTEIN PHOSPHATASE CDC14 118.85 0.4872 33 Mapoly0070s0005 [KOG0286] G-protein beta subunit; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat 125.33 0.5249 34 Mapoly0003s0174 - 130.64 0.4889 35 Mapoly0054s0071 - 134.62 0.5385 36 Mapoly0001s0127 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PF13923] Zinc finger, C3HC4 type (RING finger); [PTHR15242] SPLICING FACTOR, ARGININE/SERINE-RICH 2,RNAP C-TERM INTERACTING PROTEIN; [PF00628] PHD-finger; [GO:0005515] protein binding 138.06 0.5195 37 Mapoly0001s0284 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0005515] protein binding; [GO:0000160] phosphorelay signal transduction system; [KOG0519] Sensory transduction histidine kinase; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity; [PF01590] GAF domain 138.25 0.5031 38 Mapoly0001s0391 [GO:0005634] nucleus; [PF05965] F/Y rich C-terminus 139.40 0.5359 39 Mapoly0039s0014 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN 140.18 0.5253 40 Mapoly0037s0008 [PF10250] GDP-fucose protein O-fucosyltransferase; [PTHR31741] FAMILY NOT NAMED 145.77 0.5191 41 Mapoly0043s0041 [PTHR21737] POLYGLUTAMINE BINDING PROTEIN 1/MARVEL (MEMBRANE-ASSOCIATING) DOMAIN CONTAINING 3; [K12865] polyglutamine-binding protein 1; [PF00397] WW domain; [GO:0005515] protein binding; [PTHR21737:SF3] POLYGLUTAMINE BINDING PROTEIN 1 147.66 0.5462 42 Mapoly0039s0088 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation 148.36 0.5297 43 Mapoly0048s0100 [PTHR18937:SF8] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC3; [GO:0005524] ATP binding; [KOG0964] Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3); [GO:0008280] cohesin core heterodimer; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [GO:0007064] mitotic sister chromatid cohesion; [PTHR18937] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; [PF02463] RecF/RecN/SMC N terminal domain; [GO:0006281] DNA repair; [GO:0051276] chromosome organization; [GO:0005694] chromosome; [PF06470] SMC proteins Flexible Hinge Domain; [K06669] structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) 148.36 0.5339 44 Mapoly0044s0016 - 148.79 0.4778 45 Mapoly0005s0056 [GO:0005524] ATP binding; [PTHR11752] HELICASE SKI2W; [KOG0947] Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF08148] DSHCT (NUC185) domain; [3.6.4.-] Acting on acid anhydrides; involved in cellular and subcellular movement.; [PF13234] rRNA-processing arch domain; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; [K12599] antiviral helicase SKI2 [EC:3.6.4.-] 148.88 0.5334 46 Mapoly0066s0087 [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF09382] RQC domain; [KOG0353] ATP-dependent DNA helicase; [3.6.4.12] DNA helicase.; [K10899] ATP-dependent DNA helicase Q1 [EC:3.6.4.12]; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [GO:0005622] intracellular; [GO:0003676] nucleic acid binding; [GO:0043140] ATP-dependent 3'-5' DNA helicase activity; [PF00570] HRDC domain 152.84 0.5264 47 Mapoly0009s0010 [PTHR21677] CRAMPED PROTEIN 153.95 0.5334 48 Mapoly0013s0109 [PF00514] Armadillo/beta-catenin-like repeat; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING 154.26 0.5277 49 Mapoly0003s0185 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [K00914] phosphatidylinositol 3-kinase [EC:2.7.1.137]; [GO:0046854] phosphatidylinositol phosphorylation; [KOG0906] Phosphatidylinositol 3-kinase VPS34, involved in signal transduction; [PTHR10048] PHOSPHATIDYLINOSITOL KINASE; [PF00613] Phosphoinositide 3-kinase family, accessory domain (PIK domain); [2.7.1.137] Phosphatidylinositol 3-kinase.; [PF00454] Phosphatidylinositol 3- and 4-kinase; [GO:0048015] phosphatidylinositol-mediated signaling; [PF00792] Phosphoinositide 3-kinase C2 155.56 0.5021 50 Mapoly0008s0039 [PTHR23120:SF0] SUBFAMILY NOT NAMED; [PTHR23120] MAESTRO-RELATED HEAT DOMAIN-CONTAINING; [KOG2032] Uncharacterized conserved protein 161.39 0.5080