Guide Gene
- Gene ID
- Mapoly0038s0063
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0030904] retromer complex; [GO:0015031] protein transport; [PF03635] Vacuolar protein sorting-associated protein 35; [GO:0042147] retrograde transport, endosome to Golgi; [PTHR13673:SF0] SUBFAMILY NOT NAMED; [PTHR13673] ESOPHAGEAL CANCER ASSOCIATED PROTEIN; [KOG3682] Predicted membrane protein (associated with esophageal cancer in humans)
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0038s0063 [GO:0030904] retromer complex; [GO:0015031] protein transport; [PF03635] Vacuolar protein sorting-associated protein 35; [GO:0042147] retrograde transport, endosome to Golgi; [PTHR13673:SF0] SUBFAMILY NOT NAMED; [PTHR13673] ESOPHAGEAL CANCER ASSOCIATED PROTEIN; [KOG3682] Predicted membrane protein (associated with esophageal cancer in humans) 0.00 1.0000 1 Mapoly0001s0516 [KOG2428] Uncharacterized conserved protein; [PF04004] Leo1-like protein; [PTHR23146] LEO1 PROTEIN; [PTHR23146:SF0] SUBFAMILY NOT NAMED 4.00 0.7895 2 Mapoly0096s0053 - 4.58 0.8216 3 Mapoly0140s0030 [PF00773] RNB domain; [PTHR23355] RIBONUCLEASE; [KOG2102] Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 5.66 0.8036 4 Mapoly0080s0034 [2.1.1.43] Histone-lysine N-methyltransferase.; [KOG1082] Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [K11419] histone-lysine N-methyltransferase SUV39H [EC:2.1.1.43]; [PF05033] Pre-SET motif; [GO:0005515] protein binding; [PF00856] SET domain; [GO:0008270] zinc ion binding; [GO:0018024] histone-lysine N-methyltransferase activity; [PTHR22884] SET DOMAIN PROTEINS; [GO:0005634] nucleus; [GO:0034968] histone lysine methylation; [PF13771] PHD-like zinc-binding domain 6.93 0.8041 5 Mapoly0024s0108 [PF13371] Tetratricopeptide repeat; [PTHR23082] TRANSCRIPTION INITIATION FACTOR IIIC (TFIIIC), POLYPEPTIDE 3-RELATED; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF13174] Tetratricopeptide repeat; [KOG2076] RNA polymerase III transcription factor TFIIIC 7.42 0.7858 6 Mapoly0010s0103 - 8.31 0.7632 7 Mapoly0001s0012 [PF10266] Hereditary spastic paraplegia protein strumpellin; [GO:0071203] WASH complex; [PTHR15691:SF6] PROTEIN KIAA0196; [KOG3666] Uncharacterized conserved protein; [PTHR15691] PROTEIN KIAA0196 9.17 0.7927 8 Mapoly0043s0035 [KOG4283] Transcription-coupled repair protein CSA, contains WD40 domain; [GO:0005515] protein binding; [K10570] DNA excision repair protein ERCC-8; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat 9.17 0.7794 9 Mapoly0066s0087 [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF09382] RQC domain; [KOG0353] ATP-dependent DNA helicase; [3.6.4.12] DNA helicase.; [K10899] ATP-dependent DNA helicase Q1 [EC:3.6.4.12]; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [GO:0005622] intracellular; [GO:0003676] nucleic acid binding; [GO:0043140] ATP-dependent 3'-5' DNA helicase activity; [PF00570] HRDC domain 9.80 0.7776 10 Mapoly0011s0219 - 10.20 0.7806 11 Mapoly0043s0012 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [K13123] G patch domain-containing protein 1; [PTHR13384] FAMILY NOT NAMED; [KOG2138] Predicted RNA binding protein, contains G-patch domain; [PF07713] Protein of unknown function (DUF1604); [PF01805] Surp module 10.30 0.8068 12 Mapoly0005s0111 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 11.40 0.7883 13 Mapoly0015s0191 [PTHR14270:SF0] SUBFAMILY NOT NAMED; [PTHR14270] UNCHARACTERIZED; [KOG4181] Uncharacterized conserved protein 13.42 0.7785 14 Mapoly0005s0227 [PF01663] Type I phosphodiesterase / nucleotide pyrophosphatase; [GO:0003824] catalytic activity; [KOG2125] Glycosylphosphatidylinositol anchor synthesis protein; [2.7.-.-] Transferring phosphorous-containing groups.; [K05310] ethanolaminephosphotransferase [EC:2.7.-.-]; [PTHR23072:SF0] SUBFAMILY NOT NAMED; [PTHR23072] PHOSPHATIDYLINOSITOL GLYCAN-RELATED 13.56 0.7401 15 Mapoly0251s0001 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0663] Protein kinase PITSLRE and related kinases; [K08818] cell division cycle 2-like [EC:2.7.11.22]; [PTHR24056:SF107] CELL DIVISION PROTEIN KINASE 2 (CDC2-RELATED KINASE); [2.7.11.22] Cyclin-dependent kinase.; [PTHR24056] CELL DIVISION PROTEIN KINASE 13.60 0.8011 16 Mapoly0122s0032 [PF14695] Lines C-terminus 14.56 0.7342 17 Mapoly0079s0042 [GO:0003723] RNA binding; [KOG2202] U2 snRNP splicing factor, small subunit, and related proteins; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12620] U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT; [GO:0005634] nucleus; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [GO:0046872] metal ion binding 16.25 0.7856 18 Mapoly0005s0121 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG0154] RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains; [PF01585] G-patch domain; [K13094] RNA-binding protein 5/10; [PTHR13948] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [PTHR13948:SF3] RNA-BINDING PROTEIN; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18.00 0.7890 19 Mapoly0048s0088 [PF00397] WW domain; [GO:0005515] protein binding; [K12824] transcription elongation regulator 1; [PTHR15377:SF3] SUBFAMILY NOT NAMED; [PTHR15377] TRANSCRIPTION FACTOR CA150B RELATEDTCERG1; [PF01846] FF domain; [KOG0155] Transcription factor CA150 19.44 0.7903 20 Mapoly0054s0029 [3.1.26.11] Ribonuclease Z.; [PTHR12553] RIBONUCLEASE Z; [K00784] ribonuclease Z [EC:3.1.26.11]; [PF12706] Beta-lactamase superfamily domain 25.38 0.7592 21 Mapoly0063s0002 [PF01480] PWI domain; [K13171] serine/arginine repetitive matrix protein 1; [PTHR23148] SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN; [GO:0006397] mRNA processing; [KOG2146] Splicing coactivator SRm160/300, subunit SRm160 (contains PWI domain) 28.28 0.7701 22 Mapoly0069s0045 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0003910] DNA ligase (ATP) activity; [PF04679] ATP dependent DNA ligase C terminal region; [PTHR10459] DNA LIGASE; [PF01068] ATP dependent DNA ligase domain; [GO:0006281] DNA repair; [PF12706] Beta-lactamase superfamily domain; [PF04675] DNA ligase N terminus; [PF07522] DNA repair metallo-beta-lactamase; [GO:0006310] DNA recombination; [KOG0967] ATP-dependent DNA ligase I 31.81 0.7654 23 Mapoly0045s0077 [PTHR11807:SF2] CELL CYCLE PROTEIN MESJ; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PTHR11807] ATPASES OF THE PP SUPERFAMILY-RELATED; [GO:0016879] ligase activity, forming carbon-nitrogen bonds; [PF01171] PP-loop family; [GO:0008033] tRNA processing 32.50 0.7410 24 Mapoly0051s0020 [PTHR12785:SF6] SUBFAMILY NOT NAMED; [K12829] splicing factor 3B subunit 2; [GO:0005634] nucleus; [PF04046] PSP; [KOG2330] Splicing factor 3b, subunit 2; [PTHR12785] FAMILY NOT NAMED; [PF04037] Domain of unknown function (DUF382) 34.50 0.7767 25 Mapoly0005s0056 [GO:0005524] ATP binding; [PTHR11752] HELICASE SKI2W; [KOG0947] Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF08148] DSHCT (NUC185) domain; [3.6.4.-] Acting on acid anhydrides; involved in cellular and subcellular movement.; [PF13234] rRNA-processing arch domain; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; [K12599] antiviral helicase SKI2 [EC:3.6.4.-] 35.31 0.7584 26 Mapoly0021s0150 [PF00226] DnaJ domain 36.95 0.6350 27 Mapoly0072s0016 [GO:0005515] protein binding; [PTHR15398] BROMODOMAIN-CONTAINING PROTEIN 8; [PF00439] Bromodomain; [K11321] bromodomain-containing protein 8; [PTHR15398:SF0] SUBFAMILY NOT NAMED 40.80 0.7403 28 Mapoly0153s0011 [PF13871] Helicase_C-like; [GO:0006355] regulation of transcription, DNA-dependent; [KOG1513] Nuclear helicase MOP-3/SNO (DEAD-box superfamily); [PTHR12706] STRAWBERRY NOTCH-RELATED; [PF13872] P-loop containing NTP hydrolase pore-1 41.13 0.7753 29 Mapoly0006s0121 - 45.73 0.7430 30 Mapoly0148s0032 [PF01480] PWI domain; [PTHR18806:SF4] SUBFAMILY NOT NAMED; [GO:0006397] mRNA processing; [PTHR18806] RBM25 PROTEIN; [GO:0003676] nucleic acid binding; [K12822] RNA-binding protein 25; [KOG2253] U1 snRNP complex, subunit SNU71 and related PWI-motif proteins; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46.90 0.7618 31 Mapoly0002s0195 [PTHR15180] GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1; [PF04182] B-block binding subunit of TFIIIC 47.24 0.7627 32 Mapoly0009s0010 [PTHR21677] CRAMPED PROTEIN 49.96 0.7515 33 Mapoly0001s0493 [GO:0005524] ATP binding; [3.6.4.13] RNA helicase.; [K12858] ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0333] U5 snRNP-like RNA helicase subunit; [PTHR24031:SF23] SUBFAMILY NOT NAMED 50.91 0.7466 34 Mapoly0089s0002 [PF12850] Calcineurin-like phosphoesterase superfamily domain; [PF02463] RecF/RecN/SMC N terminal domain; [PTHR32114] FAMILY NOT NAMED; [GO:0006281] DNA repair; [GO:0004518] nuclease activity 50.95 0.6467 35 Mapoly0043s0041 [PTHR21737] POLYGLUTAMINE BINDING PROTEIN 1/MARVEL (MEMBRANE-ASSOCIATING) DOMAIN CONTAINING 3; [K12865] polyglutamine-binding protein 1; [PF00397] WW domain; [GO:0005515] protein binding; [PTHR21737:SF3] POLYGLUTAMINE BINDING PROTEIN 1 51.18 0.7604 36 Mapoly0047s0094 [PF12710] haloacid dehalogenase-like hydrolase; [K01552] arsenite-transporting ATPase [EC:3.6.3.16]; [GO:0000166] nucleotide binding; [GO:0016021] integral to membrane; [PF12409] P5-type ATPase cation transporter; [GO:0016887] ATPase activity; [3.6.3.-] Acting on acid anhydrides; catalyzing transmembrane movement of substances.; [GO:0006812] cation transport; [PTHR24093] FAMILY NOT NAMED; [GO:0046872] metal ion binding; [KOG0208] Cation transport ATPase; [PF00122] E1-E2 ATPase; [PTHR24093:SF84] CATION-TRANSPORTING P-TYPE ATPASE 52.76 0.6688 37 Mapoly0058s0081 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG0387] Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); [PF00271] Helicase conserved C-terminal domain 52.85 0.7743 38 Mapoly0005s0105 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 54.04 0.7172 39 Mapoly0043s0067 [GO:0005524] ATP binding; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0334] RNA helicase; [K12811] ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]; [PTHR24031:SF25] SUBFAMILY NOT NAMED 55.40 0.7508 40 Mapoly0007s0016 - 55.75 0.6975 41 Mapoly0121s0014 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR23329] TUFTELIN-INTERACTING PROTEIN 11-RELATED; [PF07842] GC-rich sequence DNA-binding factor-like protein; [KOG2184] Tuftelin-interacting protein TIP39, contains G-patch domain; [PF01585] G-patch domain; [PF12457] Tuftelin interacting protein N terminal; [GO:0005634] nucleus; [GO:0003676] nucleic acid binding; [PTHR23329:SF1] TUFTELIN INTERACTING PROTEIN 11; [K13103] tuftelin-interacting protein 11 55.86 0.7605 42 Mapoly0042s0017 [PF12689] Acid Phosphatase; [GO:0016791] phosphatase activity; [PTHR17901] FAMILY NOT NAMED 56.12 0.6113 43 Mapoly0046s0104 [PF00628] PHD-finger; [GO:0005515] protein binding 58.33 0.7428 44 Mapoly0011s0138 [PF12717] non-SMC mitotic condensation complex subunit 1; [K13141] integrator complex subunit 4; [PTHR20938] UNCHARACTERIZED; [PTHR20938:SF0] SUBFAMILY NOT NAMED 59.04 0.7687 45 Mapoly0026s0069 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 59.37 0.7388 46 Mapoly0048s0100 [PTHR18937:SF8] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC3; [GO:0005524] ATP binding; [KOG0964] Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3); [GO:0008280] cohesin core heterodimer; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [GO:0007064] mitotic sister chromatid cohesion; [PTHR18937] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; [PF02463] RecF/RecN/SMC N terminal domain; [GO:0006281] DNA repair; [GO:0051276] chromosome organization; [GO:0005694] chromosome; [PF06470] SMC proteins Flexible Hinge Domain; [K06669] structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) 62.03 0.7465 47 Mapoly4108s0001 [PTHR23140] RNA PROCESSING PROTEIN LD23810P 62.21 0.7092 48 Mapoly0099s0003 [GO:0000922] spindle pole; [PF04130] Spc97 / Spc98 family; [GO:0005815] microtubule organizing center; [GO:0000226] microtubule cytoskeleton organization; [PTHR19302] GAMMA TUBULIN COMPLEX PROTEIN 63.28 0.7345 49 Mapoly0043s0141 [PTHR13366] MALARIA ANTIGEN-RELATED; [KOG4535] HEAT and armadillo repeat-containing protein; [PF13251] Domain of unknown function (DUF4042); [PF13646] HEAT repeats 63.44 0.6726 50 Mapoly0010s0036 [KOG2002] TPR-containing nuclear phosphoprotein that regulates K(+) uptake; [PF07719] Tetratricopeptide repeat; [PTHR14027:SF2] TPR REPEAT NUCLEAR PHOSPHOPROTEIN; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF13174] Tetratricopeptide repeat; [PF13181] Tetratricopeptide repeat; [PF13424] Tetratricopeptide repeat; [PTHR14027] TPR REPEAT NUCLEAR PHOSPHOPROTEIN/CTR9; [PF00515] Tetratricopeptide repeat 63.97 0.7551