Guide Gene

Gene ID
Mapoly0013s0086
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG0452] RNA-binding translational regulator IRP (aconitase superfamily); [4.2.1.3] Aconitate hydratase.; [PF00694] Aconitase C-terminal domain; [K01681] aconitate hydratase 1 [EC:4.2.1.3]; [GO:0008152] metabolic process; [PTHR11670] ACONITASE; [PTHR11670:SF1] ACONITASE; [PF00330] Aconitase family (aconitate hydratase)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0013s0086 [KOG0452] RNA-binding translational regulator IRP (aconitase superfamily); [4.2.1.3] Aconitate hydratase.; [PF00694] Aconitase C-terminal domain; [K01681] aconitate hydratase 1 [EC:4.2.1.3]; [GO:0008152] metabolic process; [PTHR11670] ACONITASE; [PTHR11670:SF1] ACONITASE; [PF00330] Aconitase family (aconitate hydratase) 0.00 1.0000
1 Mapoly0179s0022 [PTHR10857] COPINE; [PF10539] Development and cell death domain5.740.7252
2 Mapoly0074s0068 [GO:0000287] magnesium ion binding; [GO:0004743] pyruvate kinase activity; [GO:0006096] glycolysis; [GO:0030955] potassium ion binding; [PF02887] Pyruvate kinase, alpha/beta domain; [PF00224] Pyruvate kinase, barrel domain; [K00873] pyruvate kinase [EC:2.7.1.40]; [KOG2323] Pyruvate kinase; [PTHR11817] PYRUVATE KINASE; [2.7.1.40] Pyruvate kinase.6.240.7210
3 Mapoly0002s0273 [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF06813] Nodulin-like7.750.7228
4 Mapoly0003s0258 [PF02204] Vacuolar sorting protein 9 (VPS9) domain; [KOG2319] Vacuolar assembly/sorting protein VPS9; [PTHR23101] RAB GDP/GTP EXCHANGE FACTOR7.940.6981
5 Mapoly0001s0327 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [2.3.1.12] Dihydrolipoyllysine-residue acetyltransferase.; [PF00364] Biotin-requiring enzyme; [KOG0557] Dihydrolipoamide acetyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [K00627] pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [PF02817] e3 binding domain11.660.6963
6 Mapoly0099s0031 [PTHR12742] RNA-BINDING PROTEIN; [KOG1457] RNA binding protein (contains RRM repeats); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)13.420.7013
7 Mapoly0076s0039 [PF00096] Zinc finger, C2H2 type; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO; [GO:0046872] metal ion binding14.280.6835
8 Mapoly0113s0032 [GO:0006396] RNA processing; [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF02170] PAZ domain; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [GO:0005515] protein binding; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [PF03368] Dicer dimerisation domain; [PF00270] DEAD/DEAH box helicase; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [GO:0003676] nucleic acid binding18.220.7040
9 Mapoly0003s0222 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [K11592] endoribonuclease Dicer [EC:3.1.26.-]; [PF02170] PAZ domain; [3.1.26.-] Endoribonucleases producing 5'-phosphomonoesters.; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [GO:0005515] protein binding; [PF03368] Dicer dimerisation domain; [PF00636] Ribonuclease III domain; [PF00270] DEAD/DEAH box helicase; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1; [GO:0003676] nucleic acid binding; [KOG0701] dsRNA-specific nuclease Dicer and related ribonucleases19.750.6854
10 Mapoly0112s0020 -20.780.6087
11 Mapoly0075s0069 [GO:0030130] clathrin coat of trans-Golgi network vesicle; [GO:0016192] vesicle-mediated transport; [PTHR10639] CLATHRIN LIGHT CHAIN; [PF01086] Clathrin light chain; [GO:0006886] intracellular protein transport; [GO:0030132] clathrin coat of coated pit; [GO:0005198] structural molecule activity21.330.6696
12 Mapoly0102s0002 [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046961] proton-transporting ATPase activity, rotational mechanism; [K02144] V-type H+-transporting ATPase 54 kD subunit [EC:3.6.3.14]; [PF11698] V-ATPase subunit H; [PTHR10698:SF0] V-TYPE PROTON ATPASE SUBUNIT H; [GO:0000221] vacuolar proton-transporting V-type ATPase, V1 domain; [KOG2759] Vacuolar H+-ATPase V1 sector, subunit H; [GO:0015991] ATP hydrolysis coupled proton transport; [GO:0016820] hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; [PF03224] V-ATPase subunit H; [PTHR10698] V-TYPE PROTON ATPASE SUBUNIT H22.850.6939
13 Mapoly0130s0022 [GO:0008565] protein transporter activity; [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [GO:0015031] protein transport; [PTHR22780:SF5] ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA SUBUNIT (GAMMA-ADAPTIN); [PF02883] Adaptin C-terminal domain; [KOG1062] Vesicle coat complex AP-1, gamma subunit; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [K12391] AP-1 complex subunit gamma-1; [GO:0005794] Golgi apparatus24.250.6657
14 Mapoly0055s0098 [PTHR12363] TRANSPORTIN 3 AND IMPORTIN 13; [KOG2081] Nuclear transport regulator; [PF08389] Exportin 1-like protein25.480.6844
15 Mapoly0172s0014 [PF00569] Zinc finger, ZZ type; [GO:0008270] zinc ion binding26.850.5640
16 Mapoly0104s0038 [PF14648] FAM91 C-terminus; [PF14647] FAM91 N-terminus; [KOG3707] Uncharacterized conserved protein27.280.5943
17 Mapoly0052s0125 [PF00637] Region in Clathrin and VPS; [PTHR12616] VACUOLAR PROTEIN SORTING VPS41; [GO:0016192] vesicle-mediated transport; [KOG2066] Vacuolar assembly/sorting protein VPS41; [GO:0005515] protein binding; [GO:0006886] intracellular protein transport; [PF00400] WD domain, G-beta repeat30.400.6293
18 Mapoly0011s0005 [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [K12400] AP-4 complex subunit epsilon-1; [KOG1062] Vesicle coat complex AP-1, gamma subunit; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [PTHR22780:SF13] SUBFAMILY NOT NAMED33.880.6144
19 Mapoly0088s0024 [PF04873] Ethylene insensitive 3; [K14514] ethylene-insensitive protein 335.000.7017
20 Mapoly0009s0021 [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [KOG1984] Vesicle coat complex COPII, subunit SFB3; [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [K14007] protein transport protein SEC24; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport; [PF00626] Gelsolin repeat35.750.6568
21 Mapoly0141s0013 [PF00682] HMGL-like; [K01640] hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]; [PTHR10277:SF1] HYDROXYMETHYLGLUTARYL-COA LYASE; [PTHR10277] HOMOCITRATE SYNTHASE-RELATED; [4.1.3.4] Hydroxymethylglutaryl-CoA lyase.; [KOG2368] Hydroxymethylglutaryl-CoA lyase; [GO:0003824] catalytic activity43.010.6322
22 Mapoly0004s0112 -44.790.6595
23 Mapoly0082s0049 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [GO:0000166] nucleotide binding; [2.7.7.7] DNA-directed DNA polymerase.; [K02350] DNA polymerase zeta subunit [EC:2.7.7.7]; [PTHR10322:SF5] DNA POLYMERASE ZETA CATALYTIC SUBUNIT; [PF00136] DNA polymerase family B; [KOG0968] DNA polymerase zeta, catalytic subunit; [GO:0003887] DNA-directed DNA polymerase activity; [PF03104] DNA polymerase family B, exonuclease domain; [PF14260] C4-type zinc-finger of DNA polymerase delta; [PTHR10322] DNA POLYMERASE CATALYTIC SUBUNIT45.830.6280
24 Mapoly0029s0137 -46.250.5711
25 Mapoly0072s0094 [KOG0251] Clathrin assembly protein AP180 and related proteins, contain ENTH domain; [GO:0005543] phospholipid binding; [PF07651] ANTH domain; [PTHR22951] CLATHRIN ASSEMBLY PROTEIN47.050.6051
26 Mapoly0007s0002 [PTHR22774] UNCHARACTERIZED; [PF12624] N-terminal region of Chorein, a TM vesicle-mediated sorter; [PTHR22774:SF11] UHRF1-BINDING PROTEIN 1 UBIQUITIN-LIKE CONTAINING PHD AND RING FINGER DOMAINS 148.670.6327
27 Mapoly0117s0031 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0749] Mitochondrial ADP/ATP carrier proteins; [K05863] solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator)49.640.6118
28 Mapoly0027s0048 -51.220.6121
29 Mapoly0002s0192 -52.960.6631
30 Mapoly0069s0006 [PF05221] S-adenosyl-L-homocysteine hydrolase; [3.3.1.1] Adenosylhomocysteinase.; [GO:0004013] adenosylhomocysteinase activity; [KOG1370] S-adenosylhomocysteine hydrolase; [PTHR23420] ADENOSYLHOMOCYSTEINASE; [GO:0006730] one-carbon metabolic process; [K01251] adenosylhomocysteinase [EC:3.3.1.1]; [PF00670] S-adenosyl-L-homocysteine hydrolase, NAD binding domain54.670.6085
31 Mapoly0002s0106 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE54.990.6126
32 Mapoly0082s0081 [PF05383] La domain; [KOG2590] RNA-binding protein LARP/SRO9 and related La domain proteins; [PTHR22792] LUPUS LA PROTEIN-RELATED54.990.6432
33 Mapoly0032s0133 [PF12432] Protein of unknown function (DUF3677); [PTHR21224:SF1] SUBFAMILY NOT NAMED; [K13138] integrator complex subunit 1; [PTHR21224] UNCHARACTERIZED56.500.6512
34 Mapoly0014s0171 [KOG1339] Aspartyl protease; [PF14543] Xylanase inhibitor N-terminal; [PTHR13683] ASPARTYL PROTEASES; [PF14541] Xylanase inhibitor C-terminal; [GO:0004190] aspartic-type endopeptidase activity; [GO:0006508] proteolysis56.920.6324
35 Mapoly0001s0408 [KOG1375] Beta tubulin; [PF00091] Tubulin/FtsZ family, GTPase domain; [GO:0005874] microtubule; [K07375] tubulin beta; [PTHR11588] TUBULIN; [GO:0007017] microtubule-based process; [PF03953] Tubulin C-terminal domain; [GO:0006184] GTP catabolic process; [GO:0003924] GTPase activity; [GO:0051258] protein polymerization; [GO:0043234] protein complex; [GO:0005525] GTP binding58.090.6116
36 Mapoly0019s0051 [GO:0003723] RNA binding; [PTHR23270] PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5); [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF00575] S1 RNA binding domain; [KOG1070] rRNA processing protein Rrp5; [PF05843] Suppressor of forked protein (Suf)62.050.6392
37 Mapoly0107s0053 [GO:0008601] protein phosphatase type 2A regulator activity; [PTHR10257] SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B; [GO:0000159] protein phosphatase type 2A complex; [KOG2085] Serine/threonine protein phosphatase 2A, regulatory subunit; [GO:0007165] signal transduction; [K11584] protein phosphatase 2 (formerly 2A), regulatory subunit B'; [PF01603] Protein phosphatase 2A regulatory B subunit (B56 family)62.930.6433
38 Mapoly0034s0016 [KOG1439] RAB proteins geranylgeranyltransferase component A (RAB escort protein); [PTHR11787] RAB GDP-DISSOCIATION INHIBITOR; [PF00996] GDP dissociation inhibitor63.730.6272
39 Mapoly0032s0168 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24058:SF17] DUAL SPECIFICITY PROTEIN KINASE YAK1; [PTHR24058] DUAL SPECIFICITY PROTEIN KINASE; [KOG0667] Dual-specificity tyrosine-phosphorylation regulated kinase; [GO:0006468] protein phosphorylation63.980.6113
40 Mapoly0008s0135 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE; [KOG0582] Ste20-like serine/threonine protein kinase65.350.5886
41 Mapoly0070s0077 [PTHR21551] TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1; [PTHR21551:SF1] gb def: ENSANGP00000010369 (Fragment); [K12617] DNA topoisomerase 2-associated protein PAT166.180.5974
42 Mapoly0078s0009 [K03146] thiamine biosynthetic enzyme; [KOG2960] Protein involved in thiamine biosynthesis and DNA damage tolerance; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE; [PF01946] Thi4 family70.500.6251
43 Mapoly0047s0113 -71.520.6264
44 Mapoly0012s0024 -72.750.6300
45 Mapoly0060s0028 [PTHR24412] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding72.750.5209
46 Mapoly0012s0074 [GO:0005524] ATP binding; [K01610] phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]; [PTHR30031:SF0] PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP]; [GO:0004612] phosphoenolpyruvate carboxykinase (ATP) activity; [PTHR30031] PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP]; [PF01293] Phosphoenolpyruvate carboxykinase; [GO:0006094] gluconeogenesis; [4.1.1.49] Phosphoenolpyruvate carboxykinase (ATP).74.590.6313
47 Mapoly0094s0073 [PF03092] BT1 family; [PTHR31585] FAMILY NOT NAMED75.300.5355
48 Mapoly0029s0048 [GO:0000287] magnesium ion binding; [K00030] isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]; [GO:0055114] oxidation-reduction process; [PF00180] Isocitrate/isopropylmalate dehydrogenase; [KOG0784] Isocitrate dehydrogenase, gamma subunit; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR11835] DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE; [GO:0051287] NAD binding; [1.1.1.41] Isocitrate dehydrogenase (NAD(+)).75.580.6262
49 Mapoly0046s0118 [PF00395] S-layer homology domain76.910.5921
50 Mapoly0043s0096 [2.7.1.4] Fructokinase.; [K00847] fructokinase [EC:2.7.1.4]; [KOG2855] Ribokinase; [PF00294] pfkB family carbohydrate kinase; [PTHR10584] SUGAR KINASE77.050.6624
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