Guide Gene

Gene ID
Mapoly0004s0203
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0004s0203 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain 0.00 1.0000
1 Mapoly0033s0043 [GO:0055114] oxidation-reduction process; [1.1.1.284] S-(hydroxymethyl)glutathione dehydrogenase.; [KOG0022] Alcohol dehydrogenase, class III; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [1.1.1.1] Alcohol dehydrogenase.; [PTHR11695:SF269] PUTATIVE OXIDOREDUCTASE; [K00121] S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED4.470.7705
2 Mapoly0034s0012 [GO:0003723] RNA binding; [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG1669] Predicted mRNA cap-binding protein related to eIF-4E; [K03259] translation initiation factor eIF-4E; [PF01652] Eukaryotic initiation factor 4E; [GO:0006413] translational initiation; [PTHR11960] EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED8.370.7525
3 Mapoly0001s0236 [KOG4527] Cytochrome c oxidase, subunit VIIc/COX89.800.7090
4 Mapoly0071s0067 [GO:0004789] thiamine-phosphate diphosphorylase activity; [PF02581] Thiamine monophosphate synthase/TENI; [2.5.1.3] Thiamine-phosphate diphosphorylase.; [2.7.1.49] Hydroxymethylpyrimidine kinase.; [GO:0009228] thiamine biosynthetic process; [K14153] hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]; [KOG2598] Phosphomethylpyrimidine kinase; [2.7.4.7] Phosphomethylpyrimidine kinase.; [PTHR20858] PHOSPHOMETHYLPYRIMIDINE KINASE; [PF08543] Phosphomethylpyrimidine kinase10.580.7304
5 Mapoly0002s0035 -16.700.7411
6 Mapoly0041s0078 [GO:0045454] cell redox homeostasis; [5.3.4.1] Protein disulfide-isomerase.; [KOG0191] Thioredoxin/protein disulfide isomerase; [PTHR18929:SF38] PREDICTED: SIMILAR TO PROTEIN DISULFIDE ISOMERASE-ASSOCIATED 6; [K09584] protein disulfide-isomerase A6 [EC:5.3.4.1]; [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE21.170.7365
7 Mapoly0036s0103 [KOG2854] Possible pfkB family carbohydrate kinase; [GO:0006166] purine ribonucleoside salvage; [K00856] adenosine kinase [EC:2.7.1.20]; [PTHR10584:SF24] ADENOSINE KINASE; [PF00294] pfkB family carbohydrate kinase; [2.7.1.20] Adenosine kinase.; [GO:0004001] adenosine kinase activity; [PTHR10584] SUGAR KINASE25.590.7330
8 Mapoly0015s0104 -25.920.6841
9 Mapoly0036s0111 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity; [KOG2506] SpoU rRNA Methylase family protein26.380.6827
10 Mapoly0056s0047 -26.500.6445
11 Mapoly0014s0028 [PTHR22942:SF8] DNA REPAIR PROTEIN RAD51 HOMOLOG 4 (R51H4); [KOG1434] Meiotic recombination protein Dmc1; [PTHR22942] RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER; [PF08423] Rad5127.500.6696
12 Mapoly0035s0038 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding28.980.6842
13 Mapoly0020s0109 [K01759] lactoylglutathione lyase [EC:4.4.1.5]; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [4.4.1.5] Lactoylglutathione lyase.; [KOG2943] Predicted glyoxalase; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily32.000.6952
14 Mapoly0149s0014 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [GO:0005515] protein binding; [PTHR10410:SF3] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [K03247] translation initiation factor eIF-3 subunit 3; [KOG1560] Translation initiation factor 3, subunit h (eIF-3h); [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [GO:0005852] eukaryotic translation initiation factor 3 complex32.090.7109
15 Mapoly0177s0008 [GO:0006260] DNA replication; [PF13191] AAA ATPase domain; [GO:0005634] nucleus; [KOG2543] Origin recognition complex, subunit 5; [PF14630] Origin recognition complex (ORC) subunit 5 C-terminus; [PTHR12705] ORIGIN RECOGNITION COMPLEX SUBUNIT 5; [GO:0000808] origin recognition complex; [K02607] origin recognition complex subunit 532.220.7320
16 Mapoly0133s0052 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [K08851] TP53 regulating kinase [EC:2.7.11.1]; [PTHR12209] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [GO:0006468] protein phosphorylation; [KOG3087] Serine/threonine protein kinase; [GO:0004674] protein serine/threonine kinase activity34.760.7239
17 Mapoly0022s0038 [4.2.1.-] Hydro-lyases.; [K02372] 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; [PTHR30272] (3R)-HYDROXYMYRISTOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE; [PF07977] FabA-like domain39.820.7051
18 Mapoly0029s0121 [K11550] kinetochore protein Spc25, animal type; [PF08234] Chromosome segregation protein Spc25; [PTHR14281] FAMILY NOT NAMED43.270.7159
19 Mapoly0053s0099 [PF02225] PA domain; [GO:0004252] serine-type endopeptidase activity; [PF00082] Subtilase family; [PF05922] Peptidase inhibitor I9; [GO:0006508] proteolysis; [PTHR10795] PROPROTEIN CONVERTASE SUBTILISIN/KEXIN48.280.6679
20 Mapoly0037s0119 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain50.910.6892
21 Mapoly0151s0030 [PF00557] Metallopeptidase family M24; [PTHR10804:SF11] PROLIFERATION-ASSOCIATED PROTEIN 2G4; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P); [KOG2776] Metallopeptidase52.150.6898
22 Mapoly0179s0014 [PTHR11586:SF1] SUBFAMILY NOT NAMED; [KOG2241] tRNA-binding protein; [PF01588] Putative tRNA binding domain; [GO:0000049] tRNA binding; [PTHR11586] FAMILY NOT NAMED53.270.6829
23 Mapoly0020s0099 [GO:0005840] ribosome; [K02949] small subunit ribosomal protein S11e; [KOG1728] 40S ribosomal protein S11; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER56.280.7106
24 Mapoly0054s0063 [PTHR24012] FAMILY NOT NAMED; [KOG0107] Alternative splicing factor SRp20/9G8 (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)56.440.6554
25 Mapoly0083s0082 [PTHR15840] CGI-121 FAMILY MEMBER; [KOG4066] Cell growth regulatory protein CGR11; [PF08617] Kinase binding protein CGI-12159.130.6828
26 Mapoly0109s0034 [K03246] translation initiation factor eIF-3 subunit 2; [GO:0005515] protein binding; [PTHR19877] WD40 REPEAT PROTEIN; [KOG0643] Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1); [PF00400] WD domain, G-beta repeat62.480.6745
27 Mapoly0012s0119 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PF00467] KOW motif; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG0378] 40S ribosomal protein S4; [PTHR11581] 30S/40S RIBOSOMAL PROTEIN S4; [PF08071] RS4NT (NUC023) domain; [GO:0006412] translation; [PF01479] S4 domain; [PF00900] Ribosomal family S4e; [K02987] small subunit ribosomal protein S4e63.170.6856
28 Mapoly0109s0044 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [PF04057] Replication factor-A protein 1, N-terminal domain; [GO:0005634] nucleus; [KOG0851] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins; [PF08646] Replication factor-A C terminal domain; [GO:0003676] nucleic acid binding; [K07466] replication factor A1; [PTHR23273] REPLICATION FACTOR A 1, RFA1; [PF01336] OB-fold nucleic acid binding domain63.480.6804
29 Mapoly0036s0008 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain65.000.5680
30 Mapoly0112s0010 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF07983] X8 domain; [PF00332] Glycosyl hydrolases family 1765.970.6504
31 Mapoly0084s0025 [GO:0008565] protein transporter activity; [PTHR10527:SF1] IMPORTIN SUBUNIT BETA-1 (KARYOPHERIN SUBUNIT BETA-1); [GO:0006913] nucleocytoplasmic transport; [PTHR10527] IMPORTIN BETA68.500.6491
32 Mapoly0007s0275 [GO:0006801] superoxide metabolic process; [PF00080] Copper/zinc superoxide dismutase (SODC); [GO:0055114] oxidation-reduction process; [K04565] Cu/Zn superoxide dismutase [EC:1.15.1.1]; [PTHR10003] SUPEROXIDE DISMUTASE [CU-ZN]-RELATED; [KOG0441] Cu2+/Zn2+ superoxide dismutase SOD1; [GO:0046872] metal ion binding; [1.15.1.1] Superoxide dismutase.71.090.7048
33 Mapoly0126s0039 [PF11209] Protein of unknown function (DUF2993)71.220.6523
34 Mapoly0007s0188 [PTHR10317] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E; [KOG2758] Translation initiation factor 3, subunit e (eIF-3e); [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [GO:0005515] protein binding; [K03250] translation initiation factor eIF-3 subunit 6; [PF09440] eIF3 subunit 6 N terminal domain; [PF01399] PCI domain; [GO:0005852] eukaryotic translation initiation factor 3 complex72.660.6603
35 Mapoly0137s0029 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR10742:SF30] AMINE OXIDASE; [KOG0029] Amine oxidase73.140.6592
36 Mapoly0043s0120 [K01527] nascent polypeptide-associated complex subunit beta; [PTHR10351] TRANSCRIPTION FACTOR BTF3; [KOG2240] RNA polymerase II general transcription factor BTF3 and related proteins; [PF01849] NAC domain73.180.7033
37 Mapoly0046s0082 [GO:0000287] magnesium ion binding; [GO:0004743] pyruvate kinase activity; [GO:0006096] glycolysis; [GO:0030955] potassium ion binding; [PF02887] Pyruvate kinase, alpha/beta domain; [PF00224] Pyruvate kinase, barrel domain; [K00873] pyruvate kinase [EC:2.7.1.40]; [KOG2323] Pyruvate kinase; [PTHR11817] PYRUVATE KINASE; [2.7.1.40] Pyruvate kinase.73.890.5992
38 Mapoly0220s0002 [PF00264] Common central domain of tyrosinase; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process77.140.6063
39 Mapoly0119s0032 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process80.010.5993
40 Mapoly0043s0009 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0042254] ribosome biogenesis; [GO:0003735] structural constituent of ribosome; [PTHR21141:SF3] 60S ACIDIC RIBOSOMAL PROTEIN P0; [KOG0815] 60S acidic ribosomal protein P0; [GO:0005622] intracellular; [K02941] large subunit ribosomal protein LP0; [PF00466] Ribosomal protein L10; [PF00428] 60s Acidic ribosomal protein86.020.6662
41 Mapoly0005s0203 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF00313] 'Cold-shock' DNA-binding domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [PTHR11544] COLD SHOCK DOMAIN CONTAINING PROTEINS; [K09250] cellular nucleic acid-binding protein; [GO:0003676] nucleic acid binding; [KOG3070] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing86.140.6783
42 Mapoly0023s0066 [PF10185] Chaperone for wingless signalling and trafficking of LDL receptor86.310.5734
43 Mapoly0035s0099 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [K02321] DNA polymerase alpha subunit B; [PTHR23061:SF12] SUBFAMILY NOT NAMED; [KOG1625] DNA polymerase alpha-primase complex, polymerase-associated subunit B; [PF04042] DNA polymerase alpha/epsilon subunit B; [PTHR23061] DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT; [GO:0003887] DNA-directed DNA polymerase activity; [PF08418] DNA polymerase alpha subunit B N-terminal88.330.6790
44 Mapoly0003s0086 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H489.580.6820
45 Mapoly0014s0105 -90.390.6644
46 Mapoly0081s0019 [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [KOG0255] Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily); [PTHR24064] FAMILY NOT NAMED; [GO:0022857] transmembrane transporter activity91.670.5996
47 Mapoly0061s0010 [GO:0006269] DNA replication, synthesis of RNA primer; [GO:0003896] DNA primase activity; [PTHR10536] DNA PRIMASE SMALL SUBUNIT; [KOG2851] Eukaryotic-type DNA primase, catalytic (small) subunit; [K02684] DNA primase small subunit [EC:2.7.7.-]; [2.7.7.-] Nucleotidyltransferases.; [PF01896] Eukaryotic and archaeal DNA primase small subunit94.390.6760
48 Mapoly0097s0065 [PTHR15350:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 7; [GO:0005515] protein binding; [PF01399] PCI domain; [PTHR15350] COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17; [KOG2753] Uncharacterized conserved protein, contains PCI domain95.190.6660
49 Mapoly0033s0031 [GO:0005524] ATP binding; [GO:0050515] 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; [PTHR20861] HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE; [PF00288] GHMP kinases N terminal domain; [PTHR20861:SF2] 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE; [2.7.1.148] 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase.; [GO:0016114] terpenoid biosynthetic process; [K00919] 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]95.940.6519
50 Mapoly0073s0076 [KOG0409] Predicted dehydrogenase; [GO:0055114] oxidation-reduction process; [PF03446] NAD binding domain of 6-phosphogluconate dehydrogenase; [PTHR22981] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [GO:0004616] phosphogluconate dehydrogenase (decarboxylating) activity; [GO:0051287] NAD binding; [GO:0006098] pentose-phosphate shunt; [PF14833] NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase97.130.6338
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