Guide Gene

Gene ID
Mapoly0034s0012
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003723] RNA binding; [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG1669] Predicted mRNA cap-binding protein related to eIF-4E; [K03259] translation initiation factor eIF-4E; [PF01652] Eukaryotic initiation factor 4E; [GO:0006413] translational initiation; [PTHR11960] EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0034s0012 [GO:0003723] RNA binding; [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG1669] Predicted mRNA cap-binding protein related to eIF-4E; [K03259] translation initiation factor eIF-4E; [PF01652] Eukaryotic initiation factor 4E; [GO:0006413] translational initiation; [PTHR11960] EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 0.00 1.0000
1 Mapoly0073s0076 [KOG0409] Predicted dehydrogenase; [GO:0055114] oxidation-reduction process; [PF03446] NAD binding domain of 6-phosphogluconate dehydrogenase; [PTHR22981] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [GO:0004616] phosphogluconate dehydrogenase (decarboxylating) activity; [GO:0051287] NAD binding; [GO:0006098] pentose-phosphate shunt; [PF14833] NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase4.240.7868
2 Mapoly0179s0002 [GO:0005840] ribosome; [PTHR21011] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6; [PF01250] Ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [K02990] small subunit ribosomal protein S6; [GO:0019843] rRNA binding; [GO:0006412] translation4.470.8223
3 Mapoly0133s0052 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [K08851] TP53 regulating kinase [EC:2.7.11.1]; [PTHR12209] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [GO:0006468] protein phosphorylation; [KOG3087] Serine/threonine protein kinase; [GO:0004674] protein serine/threonine kinase activity4.690.8403
4 Mapoly0181s0002 [PTHR10772] 10 KDA HEAT SHOCK PROTEIN; [KOG1641] Mitochondrial chaperonin; [GO:0005737] cytoplasm; [PF00166] Chaperonin 10 Kd subunit; [GO:0006457] protein folding6.400.8457
5 Mapoly0071s0067 [GO:0004789] thiamine-phosphate diphosphorylase activity; [PF02581] Thiamine monophosphate synthase/TENI; [2.5.1.3] Thiamine-phosphate diphosphorylase.; [2.7.1.49] Hydroxymethylpyrimidine kinase.; [GO:0009228] thiamine biosynthetic process; [K14153] hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]; [KOG2598] Phosphomethylpyrimidine kinase; [2.7.4.7] Phosphomethylpyrimidine kinase.; [PTHR20858] PHOSPHOMETHYLPYRIMIDINE KINASE; [PF08543] Phosphomethylpyrimidine kinase8.120.7805
6 Mapoly0004s0203 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain8.370.7525
7 Mapoly0083s0082 [PTHR15840] CGI-121 FAMILY MEMBER; [KOG4066] Cell growth regulatory protein CGR11; [PF08617] Kinase binding protein CGI-1218.370.8216
8 Mapoly0078s0003 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity10.100.8100
9 Mapoly0005s0217 [KOG3428] Small nuclear ribonucleoprotein SMD1 and related snRNPs; [K11087] small nuclear ribonucleoprotein D1; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain10.250.8227
10 Mapoly0126s0039 [PF11209] Protein of unknown function (DUF2993)15.680.7453
11 Mapoly0151s0030 [PF00557] Metallopeptidase family M24; [PTHR10804:SF11] PROLIFERATION-ASSOCIATED PROTEIN 2G4; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P); [KOG2776] Metallopeptidase16.160.7985
12 Mapoly0043s0090 [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)17.000.7872
13 Mapoly0036s0103 [KOG2854] Possible pfkB family carbohydrate kinase; [GO:0006166] purine ribonucleoside salvage; [K00856] adenosine kinase [EC:2.7.1.20]; [PTHR10584:SF24] ADENOSINE KINASE; [PF00294] pfkB family carbohydrate kinase; [2.7.1.20] Adenosine kinase.; [GO:0004001] adenosine kinase activity; [PTHR10584] SUGAR KINASE17.610.7984
14 Mapoly0056s0020 [PF04548] AIG1 family; [PTHR10903] GTPASE, IMAP FAMILY MEMBER-RELATED; [GO:0005525] GTP binding17.750.7884
15 Mapoly0007s0163 [PTHR22055] 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN (PDGF-ASSOCIATED PROTEIN); [PF10252] Casein kinase substrate phosphoprotein PP28; [KOG3375] Phosphoprotein/predicted coiled-coil protein18.140.8023
16 Mapoly0053s0026 -20.490.7922
17 Mapoly0030s0108 [GO:0006378] mRNA polyadenylation; [K14397] cleavage and polyadenylation specificity factor subunit 5; [GO:0005849] mRNA cleavage factor complex; [PF13869] Nucleotide hydrolase; [GO:0003729] mRNA binding; [PTHR13047] PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT; [KOG1689] mRNA cleavage factor I subunit24.980.7903
18 Mapoly0007s0079 [KOG1308] Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein; [PTHR22904] TPR REPEAT CONTAINING PROTEIN27.150.7967
19 Mapoly0087s0005 [PF08186] Wound-inducible basic protein family27.420.7875
20 Mapoly0001s0201 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [K02943] large subunit ribosomal protein LP2; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein27.570.7827
21 Mapoly0060s0048 [GO:0003743] translation initiation factor activity; [PF01253] Translation initiation factor SUI1; [GO:0006413] translational initiation; [PTHR12789] DENSITY-REGULATED PROTEIN HOMOLOG; [KOG3239] Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1)29.500.7659
22 Mapoly0019s0016 [PF00574] Clp protease; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit30.720.7991
23 Mapoly0022s0038 [4.2.1.-] Hydro-lyases.; [K02372] 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; [PTHR30272] (3R)-HYDROXYMYRISTOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE; [PF07977] FabA-like domain31.220.7754
24 Mapoly0002s0035 -31.750.7820
25 Mapoly0126s0032 -33.470.7268
26 Mapoly0046s0116 [PF11326] Protein of unknown function (DUF3128)34.810.6715
27 Mapoly0005s0006 [GO:0003723] RNA binding; [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG1670] Translation initiation factor 4F, cap-binding subunit (eIF-4E) and related cap-binding proteins; [K03259] translation initiation factor eIF-4E; [PF01652] Eukaryotic initiation factor 4E; [GO:0006413] translational initiation; [PTHR11960] EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED35.870.7562
28 Mapoly0007s0188 [PTHR10317] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E; [KOG2758] Translation initiation factor 3, subunit e (eIF-3e); [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [GO:0005515] protein binding; [K03250] translation initiation factor eIF-3 subunit 6; [PF09440] eIF3 subunit 6 N terminal domain; [PF01399] PCI domain; [GO:0005852] eukaryotic translation initiation factor 3 complex35.920.7439
29 Mapoly0041s0078 [GO:0045454] cell redox homeostasis; [5.3.4.1] Protein disulfide-isomerase.; [KOG0191] Thioredoxin/protein disulfide isomerase; [PTHR18929:SF38] PREDICTED: SIMILAR TO PROTEIN DISULFIDE ISOMERASE-ASSOCIATED 6; [K09584] protein disulfide-isomerase A6 [EC:5.3.4.1]; [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE38.180.7683
30 Mapoly0029s0092 [GO:0006561] proline biosynthetic process; [PF03807] NADP oxidoreductase coenzyme F420-dependent; [K00286] pyrroline-5-carboxylate reductase [EC:1.5.1.2]; [GO:0055114] oxidation-reduction process; [GO:0004735] pyrroline-5-carboxylate reductase activity; [KOG3124] Pyrroline-5-carboxylate reductase; [1.5.1.2] Pyrroline-5-carboxylate reductase.; [PTHR11645] PYRROLINE-5-CARBOXYLATE REDUCTASE; [PF14748] Pyrroline-5-carboxylate reductase dimerisation38.500.7859
31 Mapoly0026s0057 [PTHR23417] 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; [PF02390] Putative methyltransferase; [GO:0008176] tRNA (guanine-N7-)-methyltransferase activity; [K03439] tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]; [2.1.1.33] tRNA (guanine(46)-N(7))-methyltransferase.; [KOG3115] Methyltransferase-like protein; [GO:0006400] tRNA modification38.830.7353
32 Mapoly0075s0047 [GO:0006807] nitrogen compound metabolic process; [GO:0016151] nickel cation binding; [PF01730] UreF39.190.6584
33 Mapoly0049s0045 [PF13301] Protein of unknown function (DUF4079)44.740.6852
34 Mapoly0028s0045 -45.000.7173
35 Mapoly0035s0038 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding45.480.7110
36 Mapoly0045s0080 [GO:0004659] prenyltransferase activity; [GO:0016021] integral to membrane; [2.5.1.62] Chlorophyll synthase.; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family; [K04040] chlorophyll synthase [EC:2.5.1.62]; [KOG1381] Para-hydroxybenzoate-polyprenyl transferase48.740.7780
37 Mapoly0027s0067 [GO:0005840] ribosome; [PF00238] Ribosomal protein L14p/L23e; [GO:0003735] structural constituent of ribosome; [KOG0901] 60S ribosomal protein L14/L17/L23; [PTHR11761] 50S/60S RIBOSOMAL PROTEIN L14/L23; [GO:0006412] translation; [K02894] large subunit ribosomal protein L23e49.780.7901
38 Mapoly0162s0019 [GO:0005840] ribosome; [KOG1624] Mitochondrial/chloroplast ribosomal protein L4; [GO:0003735] structural constituent of ribosome; [K02926] large subunit ribosomal protein L4; [PF00573] Ribosomal protein L4/L1 family; [PTHR10746] 50S RIBOSOMAL PROTEIN L4; [GO:0006412] translation51.440.7372
39 Mapoly0005s0203 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF00313] 'Cold-shock' DNA-binding domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [PTHR11544] COLD SHOCK DOMAIN CONTAINING PROTEINS; [K09250] cellular nucleic acid-binding protein; [GO:0003676] nucleic acid binding; [KOG3070] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing54.390.7540
40 Mapoly0005s0125 [PF05383] La domain; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PF08777] RNA binding motif; [K11090] lupus La protein; [KOG4213] RNA-binding protein La; [PTHR22792] LUPUS LA PROTEIN-RELATED55.230.7402
41 Mapoly0010s0189 [PF07160] Protein of unknown function (DUF1395); [KOG4832] Uncharacterized conserved protein56.750.6823
42 Mapoly0001s0296 [GO:0008565] protein transporter activity; [PTHR11753] CLATHRIN COAT ASSEMBLY PROTEIN; [K11827] AP-2 complex subunit sigma-1; [KOG0935] Clathrin adaptor complex, small subunit; [PTHR11753:SF6] CLATHRIN COAT ASSEMBLY PROTEIN AP17; [GO:0015031] protein transport; [GO:0030122] AP-2 adaptor complex; [PF01217] Clathrin adaptor complex small chain56.850.7082
43 Mapoly0051s0054 -57.130.7397
44 Mapoly0179s0014 [PTHR11586:SF1] SUBFAMILY NOT NAMED; [KOG2241] tRNA-binding protein; [PF01588] Putative tRNA binding domain; [GO:0000049] tRNA binding; [PTHR11586] FAMILY NOT NAMED57.990.7352
45 Mapoly0039s0008 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PTHR11702:SF26] GTP-BINDING PROTEIN-RELATED; [KOG1486] GTP-binding protein DRG2 (ODN superfamily); [PF02824] TGS domain; [GO:0005525] GTP binding58.860.7052
46 Mapoly0019s0147 [GO:0005840] ribosome; [PF01165] Ribosomal protein S21; [PTHR21109:SF0] SUBFAMILY NOT NAMED; [PTHR21109] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation59.500.6776
47 Mapoly0001s0330 [PTHR11210] RING BOX; [PF12861] Anaphase-promoting complex subunit 11 RING-H2 finger; [K03358] anaphase-promoting complex subunit 11; [GO:0004842] ubiquitin-protein ligase activity; [GO:0005680] anaphase-promoting complex60.220.7422
48 Mapoly0010s0076 [2.3.1.181] Lipoyl(octanoyl) transferase.; [PTHR10993] OCTANOYLTRANSFERASE; [K03801] lipoyl(octanoyl) transferase [EC:2.3.1.181]; [KOG0325] Lipoyltransferase; [GO:0006464] cellular protein modification process; [PF03099] Biotin/lipoate A/B protein ligase family61.110.7152
49 Mapoly0096s0074 [KOG2702] Predicted panthothenate kinase/uridine kinase-related protein; [PTHR10285] URIDINE KINASE; [PF13238] AAA domain62.310.6323
50 Mapoly0109s0044 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [PF04057] Replication factor-A protein 1, N-terminal domain; [GO:0005634] nucleus; [KOG0851] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins; [PF08646] Replication factor-A C terminal domain; [GO:0003676] nucleic acid binding; [K07466] replication factor A1; [PTHR23273] REPLICATION FACTOR A 1, RFA1; [PF01336] OB-fold nucleic acid binding domain65.670.7365
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