Guide Gene
- Gene ID
- Mapoly0078s0003
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0078s0003 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity 0.00 1.0000 1 Mapoly0011s0027 [K01814] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]; [PTHR21169] 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE; [GO:0000105] histidine biosynthetic process; [5.3.1.16] 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase.; [GO:0003949] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; [KOG3055] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; [PF00977] Histidine biosynthesis protein; [PTHR21169:SF0] SUBFAMILY NOT NAMED 1.00 0.8618 2 Mapoly0053s0026 - 5.92 0.8262 3 Mapoly0011s0080 [KOG2315] Predicted translation initiation factor related to eIF-3a; [PTHR13227] NUCLEASE-RELATED; [PF08662] Eukaryotic translation initiation factor eIF2A 9.27 0.7899 4 Mapoly0034s0012 [GO:0003723] RNA binding; [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG1669] Predicted mRNA cap-binding protein related to eIF-4E; [K03259] translation initiation factor eIF-4E; [PF01652] Eukaryotic initiation factor 4E; [GO:0006413] translational initiation; [PTHR11960] EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 10.10 0.8100 5 Mapoly0003s0236 [PTHR11746] O-METHYLTRANSFERASE; [GO:0005737] cytoplasm; [PF02545] Maf-like protein; [KOG1509] Predicted nucleic acid-binding protein ASMTL; [K06287] septum formation protein 11.22 0.8437 6 Mapoly0007s0013 [PF01466] Skp1 family, dimerisation domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [K03094] S-phase kinase-associated protein 1; [KOG1724] SCF ubiquitin ligase, Skp1 component; [PTHR11165] SKP1; [PF03931] Skp1 family, tetramerisation domain 11.87 0.7886 7 Mapoly0046s0031 [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [GO:0016491] oxidoreductase activity; [KOG1971] Lysyl hydroxylase; [PTHR24014] FAMILY NOT NAMED; [PF03171] 2OG-Fe(II) oxygenase superfamily 13.75 0.7757 8 Mapoly0048s0104 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0005634] nucleus; [PF04689] DNA binding protein S1FA 13.86 0.8137 9 Mapoly0131s0005 [PF11493] Thylakoid soluble phosphoprotein TSP9 14.49 0.7900 10 Mapoly0086s0038 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation 15.94 0.8569 11 Mapoly0075s0047 [GO:0006807] nitrogen compound metabolic process; [GO:0016151] nickel cation binding; [PF01730] UreF 17.20 0.6807 12 Mapoly0019s0137 [PF03908] Sec20; [K08497] protein transport protein SEC20; [PTHR12825] BNIP1-RELATED; [PTHR12825:SF0] SUBFAMILY NOT NAMED 18.49 0.8250 13 Mapoly0005s0075 [GO:0055114] oxidation-reduction process; [GO:0009073] aromatic amino acid family biosynthetic process; [PF01959] 3-dehydroquinate synthase (EC 4.6.1.3); [GO:0016491] oxidoreductase activity; [GO:0003856] 3-dehydroquinate synthase activity 18.57 0.7467 14 Mapoly0041s0078 [GO:0045454] cell redox homeostasis; [5.3.4.1] Protein disulfide-isomerase.; [KOG0191] Thioredoxin/protein disulfide isomerase; [PTHR18929:SF38] PREDICTED: SIMILAR TO PROTEIN DISULFIDE ISOMERASE-ASSOCIATED 6; [K09584] protein disulfide-isomerase A6 [EC:5.3.4.1]; [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE 19.08 0.8019 15 Mapoly0001s0330 [PTHR11210] RING BOX; [PF12861] Anaphase-promoting complex subunit 11 RING-H2 finger; [K03358] anaphase-promoting complex subunit 11; [GO:0004842] ubiquitin-protein ligase activity; [GO:0005680] anaphase-promoting complex 19.75 0.8006 16 Mapoly0016s0044 [PF00742] Homoserine dehydrogenase; [PTHR21499] ASPARTATE KINASE; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [GO:0006520] cellular amino acid metabolic process; [KOG0455] Homoserine dehydrogenase; [GO:0050661] NADP binding; [PF03447] Homoserine dehydrogenase, NAD binding domain; [PTHR21499:SF1] ASPARTATE KINASE 20.71 0.8157 17 Mapoly0020s0099 [GO:0005840] ribosome; [K02949] small subunit ribosomal protein S11e; [KOG1728] 40S ribosomal protein S11; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 21.54 0.8262 18 Mapoly0096s0012 [PF12937] F-box-like; [GO:0005515] protein binding 22.80 0.7749 19 Mapoly0133s0052 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [K08851] TP53 regulating kinase [EC:2.7.11.1]; [PTHR12209] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [GO:0006468] protein phosphorylation; [KOG3087] Serine/threonine protein kinase; [GO:0004674] protein serine/threonine kinase activity 23.66 0.8104 20 Mapoly0055s0060 [GO:0003743] translation initiation factor activity; [PF01253] Translation initiation factor SUI1; [GO:0006413] translational initiation 28.77 0.8186 21 Mapoly0099s0054 [GO:0035064] methylated histone residue binding; [PTHR10333] INHIBITOR OF GROWTH PROTEIN; [PF12998] Inhibitor of growth proteins N-terminal histone-binding; [PF00628] PHD-finger; [GO:0005515] protein binding; [KOG1973] Chromatin remodeling protein, contains PHD Zn-finger; [GO:0016568] chromatin modification; [GO:0005634] nucleus 29.24 0.7573 22 Mapoly0007s0006 [PTHR21068] FAMILY NOT NAMED; [PTHR21068:SF3] GB DEF: HYPOTHETICAL PROTEIN 31.56 0.7280 23 Mapoly0003s0086 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H4 33.67 0.8062 24 Mapoly0005s0116 [GO:0005840] ribosome; [PF01294] Ribosomal protein L13e; [GO:0003735] structural constituent of ribosome; [PTHR11722] 60S RIBOSOMAL PROTEIN L13; [GO:0005622] intracellular; [PTHR11722:SF0] SUBFAMILY NOT NAMED; [K02873] large subunit ribosomal protein L13e; [KOG3295] 60S Ribosomal protein L13; [GO:0006412] translation 34.99 0.8190 25 Mapoly0063s0011 [GO:0005840] ribosome; [PF04758] Ribosomal protein S30; [K02983] small subunit ribosomal protein S30e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12650] 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI; [GO:0006412] translation; [KOG0009] Ubiquitin-like/40S ribosomal S30 protein fusion 36.08 0.8224 26 Mapoly0159s0014 - 37.55 0.8184 27 Mapoly0133s0010 [PF00692] dUTPase; [GO:0046080] dUTP metabolic process; [3.6.1.23] dUTP diphosphatase.; [GO:0016787] hydrolase activity; [PTHR11241] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE; [K01520] dUTP pyrophosphatase [EC:3.6.1.23]; [KOG3370] dUTPase 37.83 0.8013 28 Mapoly0010s0076 [2.3.1.181] Lipoyl(octanoyl) transferase.; [PTHR10993] OCTANOYLTRANSFERASE; [K03801] lipoyl(octanoyl) transferase [EC:2.3.1.181]; [KOG0325] Lipoyltransferase; [GO:0006464] cellular protein modification process; [PF03099] Biotin/lipoate A/B protein ligase family 38.52 0.7521 29 Mapoly0007s0163 [PTHR22055] 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN (PDGF-ASSOCIATED PROTEIN); [PF10252] Casein kinase substrate phosphoprotein PP28; [KOG3375] Phosphoprotein/predicted coiled-coil protein 43.37 0.7962 30 Mapoly0124s0012 [KOG2518] 5'-3' exonuclease; [PF00752] XPG N-terminal domain; [PF00867] XPG I-region; [K10746] exonuclease 1 [EC:3.1.-.-]; [GO:0006281] DNA repair; [GO:0004518] nuclease activity; [PTHR11081:SF8] EXONUCLEASE 1; [3.1.-.-] Acting on ester bonds.; [PTHR11081] XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY 45.79 0.7011 31 Mapoly0237s0001 [PTHR10687:SF2] SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN; [GO:0016021] integral to membrane; [GO:0015031] protein transport; [PF04144] SCAMP family; [PTHR10687] SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN (SCAMP) 46.73 0.6602 32 Mapoly0054s0044 [GO:0005840] ribosome; [K02872] large subunit ribosomal protein L13Ae; [PTHR11545:SF3] 60S RIBOSOMAL PROTEIN L13A; [KOG3204] 60S ribosomal protein L13a; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13 49.57 0.8133 33 Mapoly0023s0029 [KOG3138] Predicted N-acetyltransferase; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE 49.75 0.8110 34 Mapoly0002s0184 [GO:0005840] ribosome; [PTHR10544:SF0] 60S RIBOSOMAL PROTEIN L28; [KOG3412] 60S ribosomal protein L28; [PTHR10544] 60S RIBOSOMAL PROTEIN L28; [GO:0003735] structural constituent of ribosome; [K02903] large subunit ribosomal protein L28e; [GO:0005622] intracellular; [PF01778] Ribosomal L28e protein family; [GO:0006412] translation 50.48 0.8112 35 Mapoly0179s0002 [GO:0005840] ribosome; [PTHR21011] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6; [PF01250] Ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [K02990] small subunit ribosomal protein S6; [GO:0019843] rRNA binding; [GO:0006412] translation 52.25 0.7723 36 Mapoly0014s0043 [PF13450] NAD(P)-binding Rossmann-like domain; [PTHR10668] PHYTOENE DEHYDROGENASE; [KOG4254] Phytoene desaturase 52.42 0.6404 37 Mapoly0158s0015 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [K02969] small subunit ribosomal protein S20e; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e 55.48 0.8096 38 Mapoly0181s0002 [PTHR10772] 10 KDA HEAT SHOCK PROTEIN; [KOG1641] Mitochondrial chaperonin; [GO:0005737] cytoplasm; [PF00166] Chaperonin 10 Kd subunit; [GO:0006457] protein folding 55.71 0.7989 39 Mapoly0006s0309 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [PTHR10293] GLUTAREDOXIN-RELATED PROTEIN 56.09 0.8060 40 Mapoly0029s0092 [GO:0006561] proline biosynthetic process; [PF03807] NADP oxidoreductase coenzyme F420-dependent; [K00286] pyrroline-5-carboxylate reductase [EC:1.5.1.2]; [GO:0055114] oxidation-reduction process; [GO:0004735] pyrroline-5-carboxylate reductase activity; [KOG3124] Pyrroline-5-carboxylate reductase; [1.5.1.2] Pyrroline-5-carboxylate reductase.; [PTHR11645] PYRROLINE-5-CARBOXYLATE REDUCTASE; [PF14748] Pyrroline-5-carboxylate reductase dimerisation 56.52 0.7890 41 Mapoly0007s0011 [PTHR21139] TRIOSEPHOSPHATE ISOMERASE; [KOG1643] Triosephosphate isomerase; [5.3.1.1] Triose-phosphate isomerase.; [GO:0008152] metabolic process; [GO:0004807] triose-phosphate isomerase activity; [PF00121] Triosephosphate isomerase; [K01803] triosephosphate isomerase (TIM) [EC:5.3.1.1] 57.01 0.7421 42 Mapoly0147s0018 [KOG2239] Transcription factor containing NAC and TS-N domains; [PTHR21713] NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED; [PF01849] NAC domain; [K03626] nascent polypeptide-associated complex subunit alpha 59.63 0.8010 43 Mapoly0038s0097 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG0397] 60S ribosomal protein L11; [PF00281] Ribosomal protein L5; [GO:0006412] translation; [PTHR11994] 60S RIBOSOMAL PROTEIN L11-RELATED; [PF00673] ribosomal L5P family C-terminus 61.23 0.8053 44 Mapoly0030s0108 [GO:0006378] mRNA polyadenylation; [K14397] cleavage and polyadenylation specificity factor subunit 5; [GO:0005849] mRNA cleavage factor complex; [PF13869] Nucleotide hydrolase; [GO:0003729] mRNA binding; [PTHR13047] PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT; [KOG1689] mRNA cleavage factor I subunit 62.40 0.7806 45 Mapoly0013s0139 [GO:0005840] ribosome; [KOG1754] 40S ribosomal protein S15/S22; [PTHR11758] 30S RIBOSOMAL PROTEIN S8; [GO:0003735] structural constituent of ribosome; [K02957] small subunit ribosomal protein S15Ae; [PF00410] Ribosomal protein S8; [GO:0006412] translation 62.86 0.8085 46 Mapoly0001s0114 [PF03629] Domain of unknown function (DUF303); [PTHR31988] FAMILY NOT NAMED 66.67 0.7951 47 Mapoly0073s0056 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG3252] Uncharacterized conserved protein; [PTHR13022] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family 67.97 0.8066 48 Mapoly0015s0046 [PTHR19338] TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG; [KOG1733] Mitochondrial import inner membrane translocase, subunit TIM13; [PF02953] Tim10/DDP family zinc finger 68.07 0.7900 49 Mapoly0007s0048 [GO:0003723] RNA binding; [KOG3301] Ribosomal protein S4; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K02997] small subunit ribosomal protein S9e; [PF01479] S4 domain 69.46 0.8045 50 Mapoly0063s0098 [PF04770] ZF-HD protein dimerisation region; [PTHR31948] FAMILY NOT NAMED 70.65 0.7305