Guide Gene

Gene ID
Mapoly0046s0031
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [GO:0016491] oxidoreductase activity; [KOG1971] Lysyl hydroxylase; [PTHR24014] FAMILY NOT NAMED; [PF03171] 2OG-Fe(II) oxygenase superfamily

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0046s0031 [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [GO:0016491] oxidoreductase activity; [KOG1971] Lysyl hydroxylase; [PTHR24014] FAMILY NOT NAMED; [PF03171] 2OG-Fe(II) oxygenase superfamily 0.00 1.0000
1 Mapoly0096s0012 [PF12937] F-box-like; [GO:0005515] protein binding8.490.7570
2 Mapoly0003s0301 [PTHR21091:SF6] HOMOCYSTEINE S-METHYLTRANSFERASE; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [PF02574] Homocysteine S-methyltransferase; [K00547] homocysteine S-methyltransferase [EC:2.1.1.10]; [KOG1579] Homocysteine S-methyltransferase; [GO:0008898] homocysteine S-methyltransferase activity; [2.1.1.10] Homocysteine S-methyltransferase.9.000.7984
3 Mapoly0039s0073 -10.390.7174
4 Mapoly0078s0003 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity13.750.7757
5 Mapoly0160s0023 [PF00571] CBS domain; [PTHR11911] INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED; [GO:0030554] adenyl nucleotide binding13.780.7809
6 Mapoly0131s0005 [PF11493] Thylakoid soluble phosphoprotein TSP920.490.7313
7 Mapoly0011s0101 -24.000.7672
8 Mapoly0025s0122 [3.4.13.9] Xaa-Pro dipeptidase.; [PF05195] Aminopeptidase P, N-terminal domain; [GO:0004177] aminopeptidase activity; [K14213] Xaa-Pro dipeptidase [EC:3.4.13.9]; [GO:0030145] manganese ion binding; [PF00557] Metallopeptidase family M24; [PTHR10804:SF17] XAA-PRO DIPEPTIDASE; [KOG2737] Putative metallopeptidase; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)25.590.7594
9 Mapoly0086s0039 [PTHR12145:SF11] SUBFAMILY NOT NAMED; [PF03190] Protein of unknown function, DUF255; [KOG2244] Highly conserved protein containing a thioredoxin domain; [PTHR12145] UNCHARACTERIZED25.770.6539
10 Mapoly0016s0087 [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [K03885] NADH dehydrogenase [EC:1.6.99.3]; [1.6.99.3] NADH dehydrogenase.; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [GO:0016491] oxidoreductase activity; [KOG2495] NADH-dehydrogenase (ubiquinone); [PF07992] Pyridine nucleotide-disulphide oxidoreductase; [PTHR22915] NADH DEHYDROGENASE-RELATED29.930.7489
11 Mapoly0011s0083 [PTHR10997] IMPORTIN-7, 8, 1132.730.7482
12 Mapoly0009s0136 [PTHR24012] FAMILY NOT NAMED; [KOG0126] Predicted RNA-binding protein (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)33.540.7395
13 Mapoly0005s0152 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016602] CCAAT-binding factor complex; [KOG1657] CCAAT-binding factor, subunit C (HAP5); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR10252:SF8] TRANSCRIPTIONAL ACTIVATOR HAP5; [GO:0005622] intracellular; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED33.760.7221
14 Mapoly0011s0027 [K01814] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]; [PTHR21169] 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE; [GO:0000105] histidine biosynthetic process; [5.3.1.16] 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase.; [GO:0003949] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; [KOG3055] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; [PF00977] Histidine biosynthesis protein; [PTHR21169:SF0] SUBFAMILY NOT NAMED38.680.7382
15 Mapoly0158s0015 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [K02969] small subunit ribosomal protein S20e; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e42.580.7570
16 Mapoly0063s0035 -47.410.6209
17 Mapoly0001s0114 [PF03629] Domain of unknown function (DUF303); [PTHR31988] FAMILY NOT NAMED53.170.7423
18 Mapoly0063s0011 [GO:0005840] ribosome; [PF04758] Ribosomal protein S30; [K02983] small subunit ribosomal protein S30e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12650] 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI; [GO:0006412] translation; [KOG0009] Ubiquitin-like/40S ribosomal S30 protein fusion60.420.7481
19 Mapoly0005s0116 [GO:0005840] ribosome; [PF01294] Ribosomal protein L13e; [GO:0003735] structural constituent of ribosome; [PTHR11722] 60S RIBOSOMAL PROTEIN L13; [GO:0005622] intracellular; [PTHR11722:SF0] SUBFAMILY NOT NAMED; [K02873] large subunit ribosomal protein L13e; [KOG3295] 60S Ribosomal protein L13; [GO:0006412] translation61.190.7403
20 Mapoly0071s0101 [KOG1379] Serine/threonine protein phosphatase; [PF13672] Protein phosphatase 2C; [PTHR12320] PROTEIN PHOSPHATASE 2C63.770.6903
21 Mapoly0002s0184 [GO:0005840] ribosome; [PTHR10544:SF0] 60S RIBOSOMAL PROTEIN L28; [KOG3412] 60S ribosomal protein L28; [PTHR10544] 60S RIBOSOMAL PROTEIN L28; [GO:0003735] structural constituent of ribosome; [K02903] large subunit ribosomal protein L28e; [GO:0005622] intracellular; [PF01778] Ribosomal L28e protein family; [GO:0006412] translation63.870.7418
22 Mapoly0169s0007 -68.120.6923
23 Mapoly0007s0048 [GO:0003723] RNA binding; [KOG3301] Ribosomal protein S4; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K02997] small subunit ribosomal protein S9e; [PF01479] S4 domain69.900.7402
24 Mapoly0016s0044 [PF00742] Homoserine dehydrogenase; [PTHR21499] ASPARTATE KINASE; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [GO:0006520] cellular amino acid metabolic process; [KOG0455] Homoserine dehydrogenase; [GO:0050661] NADP binding; [PF03447] Homoserine dehydrogenase, NAD binding domain; [PTHR21499:SF1] ASPARTATE KINASE69.970.7381
25 Mapoly0084s0018 -70.000.7371
26 Mapoly0084s0003 [PTHR10792:SF1] 60S RIBOSOMAL PROTEIN L24; [KOG1722] 60s ribosomal protein L24; [K02896] large subunit ribosomal protein L24e; [PF01246] Ribosomal protein L24e; [PTHR10792] 60S RIBOSOMAL PROTEIN L2475.050.7297
27 Mapoly0015s0154 [GO:0005840] ribosome; [K02872] large subunit ribosomal protein L13Ae; [PTHR11545:SF3] 60S RIBOSOMAL PROTEIN L13A; [KOG3204] 60S ribosomal protein L13a; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L1377.730.7380
28 Mapoly0058s0097 [GO:0016020] membrane; [PF01148] Cytidylyltransferase family; [PTHR32523] FAMILY NOT NAMED; [KOG4453] Predicted ER membrane protein; [GO:0016772] transferase activity, transferring phosphorus-containing groups78.420.7141
29 Mapoly0006s0174 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein78.890.7393
30 Mapoly0171s0007 [PF14009] Domain of unknown function (DUF4228)81.490.5879
31 Mapoly0020s0099 [GO:0005840] ribosome; [K02949] small subunit ribosomal protein S11e; [KOG1728] 40S ribosomal protein S11; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER82.220.7241
32 Mapoly0078s0034 [PTHR31152] FAMILY NOT NAMED; [PF04749] PLAC8 family82.250.7047
33 Mapoly0133s0010 [PF00692] dUTPase; [GO:0046080] dUTP metabolic process; [3.6.1.23] dUTP diphosphatase.; [GO:0016787] hydrolase activity; [PTHR11241] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE; [K01520] dUTP pyrophosphatase [EC:3.6.1.23]; [KOG3370] dUTPase84.290.7175
34 Mapoly0014s0132 -85.080.6710
35 Mapoly0159s0014 -87.250.7266
36 Mapoly0087s0081 -89.530.6538
37 Mapoly0005s0062 [GO:0005840] ribosome; [PF01158] Ribosomal protein L36e; [GO:0003735] structural constituent of ribosome; [K02920] large subunit ribosomal protein L36e; [GO:0005622] intracellular; [KOG3452] 60S ribosomal protein L36; [PTHR10114] 60S RIBOSOMAL PROTEIN L36; [GO:0006412] translation91.520.7254
38 Mapoly0009s0106 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE92.090.6813
39 Mapoly0013s0048 [KOG0381] HMG box-containing protein; [PF00505] HMG (high mobility group) box; [PTHR13711] SWI/SNF-RELATED CHROMATIN BINDING PROTEIN93.160.7199
40 Mapoly0024s0037 [K13151] snurportin-1; [KOG3132] m3G-cap-specific nuclear import receptor (Snurportin1); [PTHR13403:SF6] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1); [PTHR13403] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1)94.490.6212
41 Mapoly0168s0016 [PF04068] Possible Fer4-like domain in RNase L inhibitor, RLI; [PF04034] Domain of unknown function (DUF367); [PTHR20426] FAMILY NOT NAMED; [PTHR20426:SF0] UPF0293 PROTEIN C16ORF42; [K09140] pre-rRNA-processing protein TSR3; [KOG3154] Uncharacterized conserved protein100.820.6330
42 Mapoly0057s0093 [GO:0005515] protein binding; [PTHR12197:SF75] PUTATIVE UNCHARACTERIZED PROTEIN; [PF00856] SET domain; [PTHR12197] SET AND MYND DOMAIN CONTAINING101.320.6756
43 Mapoly0069s0046 [K13035] beta-cyano-L-alanine hydratase/nitrilase [EC:3.5.5.1 3.5.5.4]; [GO:0006807] nitrogen compound metabolic process; [KOG0805] Carbon-nitrogen hydrolase; [3.5.5.4] Cyanoalanine nitrilase.; [PF00795] Carbon-nitrogen hydrolase; [PTHR23088] NITRILASE-RELATED; [GO:0016810] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; [3.5.5.1] Nitrilase.101.510.5809
44 Mapoly0013s0139 [GO:0005840] ribosome; [KOG1754] 40S ribosomal protein S15/S22; [PTHR11758] 30S RIBOSOMAL PROTEIN S8; [GO:0003735] structural constituent of ribosome; [K02957] small subunit ribosomal protein S15Ae; [PF00410] Ribosomal protein S8; [GO:0006412] translation102.100.7248
45 Mapoly0043s0043 [GO:0005840] ribosome; [KOG1678] 60s ribosomal protein L15; [GO:0003735] structural constituent of ribosome; [PTHR11847] RIBOSOMAL PROTEIN L15; [PF00827] Ribosomal L15; [K02877] large subunit ribosomal protein L15e; [GO:0006412] translation105.050.7206
46 Mapoly0001s0330 [PTHR11210] RING BOX; [PF12861] Anaphase-promoting complex subunit 11 RING-H2 finger; [K03358] anaphase-promoting complex subunit 11; [GO:0004842] ubiquitin-protein ligase activity; [GO:0005680] anaphase-promoting complex105.280.6991
47 Mapoly0003s0256 [GO:0005840] ribosome; [K02912] large subunit ribosomal protein L32e; [KOG0878] 60S ribosomal protein L32; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N; [PF01655] Ribosomal protein L32105.570.7231
48 Mapoly0086s0038 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation105.730.7240
49 Mapoly0063s0098 [PF04770] ZF-HD protein dimerisation region; [PTHR31948] FAMILY NOT NAMED109.310.6823
50 Mapoly0054s0044 [GO:0005840] ribosome; [K02872] large subunit ribosomal protein L13Ae; [PTHR11545:SF3] 60S RIBOSOMAL PROTEIN L13A; [KOG3204] 60S ribosomal protein L13a; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13109.700.7226
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