Guide Gene

Gene ID
Mapoly0048s0104
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0005634] nucleus; [PF04689] DNA binding protein S1FA

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0048s0104 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0005634] nucleus; [PF04689] DNA binding protein S1FA 0.00 1.0000
1 Mapoly0027s0067 [GO:0005840] ribosome; [PF00238] Ribosomal protein L14p/L23e; [GO:0003735] structural constituent of ribosome; [KOG0901] 60S ribosomal protein L14/L17/L23; [PTHR11761] 50S/60S RIBOSOMAL PROTEIN L14/L23; [GO:0006412] translation; [K02894] large subunit ribosomal protein L23e6.400.8524
2 Mapoly0159s0021 [PTHR13509] SEC61BETA-PROV PROTEIN; [KOG3457] Sec61 protein translocation complex, beta subunit; [PF03911] Sec61beta family; [K09481] protein transport protein SEC61 subunit beta13.420.8146
3 Mapoly0015s0046 [PTHR19338] TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG; [KOG1733] Mitochondrial import inner membrane translocase, subunit TIM13; [PF02953] Tim10/DDP family zinc finger13.780.8300
4 Mapoly0078s0003 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity13.860.8137
5 Mapoly0007s0082 -14.970.8395
6 Mapoly0053s0096 -17.200.8446
7 Mapoly0066s0080 [GO:0004452] isopentenyl-diphosphate delta-isomerase activity; [PTHR10885] ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE; [PTHR10885:SF0] ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE 1; [GO:0016787] hydrolase activity; [5.3.3.2] Isopentenyl-diphosphate Delta-isomerase.; [GO:0008299] isoprenoid biosynthetic process; [K01823] isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]; [KOG0142] Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase; [PF00293] NUDIX domain19.080.7824
8 Mapoly0086s0038 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation20.640.8408
9 Mapoly0019s0070 [PTHR13193] CGI-140; [PTHR13193:SF0] SUBFAMILY NOT NAMED; [KOG3462] Predicted membrane protein; [PF03669] Uncharacterised protein family (UPF0139)29.850.8203
10 Mapoly0007s0072 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [GO:0006457] protein folding; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [K09569] FK506-binding protein 2 [EC:5.2.1.8]; [KOG0549] FKBP-type peptidyl-prolyl cis-trans isomerase33.260.8279
11 Mapoly0158s0031 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [K02969] small subunit ribosomal protein S20e; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e33.320.8288
12 Mapoly0019s0055 -33.410.8220
13 Mapoly0085s0067 [PF02238] Cytochrome c oxidase subunit VIIa; [GO:0005746] mitochondrial respiratory chain; [GO:0009055] electron carrier activity; [GO:0004129] cytochrome-c oxidase activity33.940.8244
14 Mapoly0087s0005 [PF08186] Wound-inducible basic protein family34.470.7963
15 Mapoly0002s0129 [GO:0008565] protein transporter activity; [PTHR11753] CLATHRIN COAT ASSEMBLY PROTEIN; [KOG0934] Clathrin adaptor complex, small subunit; [GO:0015031] protein transport; [PTHR11753:SF5] CLATHRIN ASSEMBLY PROTEIN AP19; [PF01217] Clathrin adaptor complex small chain37.310.8042
16 Mapoly0030s0108 [GO:0006378] mRNA polyadenylation; [K14397] cleavage and polyadenylation specificity factor subunit 5; [GO:0005849] mRNA cleavage factor complex; [PF13869] Nucleotide hydrolase; [GO:0003729] mRNA binding; [PTHR13047] PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT; [KOG1689] mRNA cleavage factor I subunit37.340.7961
17 Mapoly0075s0047 [GO:0006807] nitrogen compound metabolic process; [GO:0016151] nickel cation binding; [PF01730] UreF37.790.6645
18 Mapoly0006s0067 [PTHR31339] FAMILY NOT NAMED; [PF10183] ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)39.950.8150
19 Mapoly0148s0030 [K03945] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 1 [EC:1.6.5.3 1.6.99.3]; [1.6.99.3] NADH dehydrogenase.; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [PTHR17098] NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNIT40.620.8216
20 Mapoly0024s0031 [PTHR11525:SF0] SUBFAMILY NOT NAMED; [PTHR11525] FARNESYL-PYROPHOSPHATE SYNTHETASE; [2.5.1.1] Dimethylallyltranstransferase.; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [KOG0711] Polyprenyl synthetase; [2.5.1.10] (2E,6E)-farnesyl diphosphate synthase.; [K00787] farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]44.720.7039
21 Mapoly0001s0018 [GO:0004175] endopeptidase activity; [K02728] 20S proteasome subunit alpha 3 [EC:3.4.25.1]; [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0004298] threonine-type endopeptidase activity; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [KOG0178] 20S proteasome, regulatory subunit alpha type PSMA4/PRE9; [PF00227] Proteasome subunit; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR11599:SF13] PROTEASOME SUBUNIT ALPHA TYPE 4; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA45.830.8067
22 Mapoly0013s0139 [GO:0005840] ribosome; [KOG1754] 40S ribosomal protein S15/S22; [PTHR11758] 30S RIBOSOMAL PROTEIN S8; [GO:0003735] structural constituent of ribosome; [K02957] small subunit ribosomal protein S15Ae; [PF00410] Ribosomal protein S8; [GO:0006412] translation46.730.8195
23 Mapoly0007s0078 [GO:0016020] membrane; [PTHR12309] SEC61 GAMMA SUBUNIT; [PF00584] SecE/Sec61-gamma subunits of protein translocation complex; [GO:0006605] protein targeting; [KOG3498] Preprotein translocase, gamma subunit; [GO:0006886] intracellular protein transport; [K07342] protein transport protein SEC61 subunit gamma and related proteins49.140.8056
24 Mapoly0005s0013 [PTHR11043:SF0] SUBFAMILY NOT NAMED; [PTHR11043] ZETA-COAT PROTEIN; [KOG3343] Vesicle coat complex COPI, zeta subunit; [PF01217] Clathrin adaptor complex small chain50.280.7973
25 Mapoly0063s0011 [GO:0005840] ribosome; [PF04758] Ribosomal protein S30; [K02983] small subunit ribosomal protein S30e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12650] 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI; [GO:0006412] translation; [KOG0009] Ubiquitin-like/40S ribosomal S30 protein fusion50.610.8175
26 Mapoly0023s0029 [KOG3138] Predicted N-acetyltransferase; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE52.480.8116
27 Mapoly0142s0011 -53.740.8093
28 Mapoly0085s0036 [KOG3309] Ferredoxin; [PTHR23426] FERREDOXIN/ADRENODOXIN57.250.7997
29 Mapoly0007s0275 [GO:0006801] superoxide metabolic process; [PF00080] Copper/zinc superoxide dismutase (SODC); [GO:0055114] oxidation-reduction process; [K04565] Cu/Zn superoxide dismutase [EC:1.15.1.1]; [PTHR10003] SUPEROXIDE DISMUTASE [CU-ZN]-RELATED; [KOG0441] Cu2+/Zn2+ superoxide dismutase SOD1; [GO:0046872] metal ion binding; [1.15.1.1] Superoxide dismutase.60.280.8045
30 Mapoly0006s0174 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein60.600.8109
31 Mapoly0102s0018 [PF06825] Heat shock factor binding protein 1; [KOG4117] Heat shock factor binding protein; [PTHR19424] HEAT SHOCK FACTOR BINDING PROTEIN 162.570.8007
32 Mapoly0015s0101 [PTHR31134] FAMILY NOT NAMED63.380.7926
33 Mapoly0001s0230 [3.6.3.14] H(+)-transporting two-sector ATPase.; [PF04627] Mitochondrial ATP synthase epsilon chain; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [GO:0046961] proton-transporting ATPase activity, rotational mechanism; [KOG3495] Mitochondrial F1F0-ATP synthase, subunit epsilon/ATP15; [GO:0015986] ATP synthesis coupled proton transport; [PTHR12448] ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIAL; [K02135] F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]; [GO:0000275] mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); [PTHR12448:SF0] SUBFAMILY NOT NAMED68.600.8011
34 Mapoly0002s0184 [GO:0005840] ribosome; [PTHR10544:SF0] 60S RIBOSOMAL PROTEIN L28; [KOG3412] 60S ribosomal protein L28; [PTHR10544] 60S RIBOSOMAL PROTEIN L28; [GO:0003735] structural constituent of ribosome; [K02903] large subunit ribosomal protein L28e; [GO:0005622] intracellular; [PF01778] Ribosomal L28e protein family; [GO:0006412] translation69.460.8041
35 Mapoly0019s0102 [PTHR23359] NUCLEOTIDE KINASE; [GO:0005524] ATP binding; [K00939] adenylate kinase [EC:2.7.4.3]; [GO:0004017] adenylate kinase activity; [GO:0019205] nucleobase-containing compound kinase activity; [KOG3078] Adenylate kinase; [GO:0006139] nucleobase-containing compound metabolic process; [PF00406] Adenylate kinase; [2.7.4.3] Adenylate kinase.; [PF05191] Adenylate kinase, active site lid70.630.7909
36 Mapoly0073s0056 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG3252] Uncharacterized conserved protein; [PTHR13022] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family71.900.8052
37 Mapoly0003s0257 [GO:0005840] ribosome; [GO:0005515] protein binding; [K02927] large subunit ribosomal protein L40e; [GO:0003735] structural constituent of ribosome; [KOG0003] Ubiquitin/60s ribosomal protein L40 fusion; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN; [GO:0006412] translation; [PF01020] Ribosomal L40e family73.890.8002
38 Mapoly0111s0029 [GO:0016651] oxidoreductase activity, acting on NAD(P)H; [PF04716] ETC complex I subunit conserved region; [GO:0022904] respiratory electron transport chain; [1.6.99.3] NADH dehydrogenase.; [PTHR12653] NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT; [KOG3365] NADH:ubiquinone oxidoreductase, NDUFA5/B13 subunit; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [K03949] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 5 [EC:1.6.5.3 1.6.99.3]; [GO:0005743] mitochondrial inner membrane77.630.7884
39 Mapoly0074s0034 [PTHR12980:SF0] SUBFAMILY NOT NAMED; [PTHR12980] UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX, SUBUNIT X; [GO:0006122] mitochondrial electron transport, ubiquinol to cytochrome c; [GO:0005740] mitochondrial envelope; [K00419] ubiquinol-cytochrome c reductase subunit 9 [EC:1.10.2.2]; [GO:0005750] mitochondrial respiratory chain complex III; [1.10.2.2] Ubiquinol--cytochrome-c reductase.; [PF05365] Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; [KOG3494] Ubiquinol cytochrome c oxidoreductase, subunit QCR978.370.7945
40 Mapoly0100s0051 [GO:0009058] biosynthetic process; [PTHR31285:SF0] SUBFAMILY NOT NAMED; [PF01467] Cytidylyltransferase; [GO:0003824] catalytic activity; [PTHR31285] FAMILY NOT NAMED78.460.7552
41 Mapoly0046s0003 [GO:0004579] dolichyl-diphosphooligosaccharide-protein glycotransferase activity; [PF02109] DAD family; [GO:0008250] oligosaccharyltransferase complex; [GO:0016021] integral to membrane; [KOG1746] Defender against cell death protein/oligosaccharyltransferase, epsilon subunit; [PTHR10705] DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1; [K12668] oligosaccharyltransferase complex subunit epsilon78.560.7843
42 Mapoly0007s0048 [GO:0003723] RNA binding; [KOG3301] Ribosomal protein S4; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K02997] small subunit ribosomal protein S9e; [PF01479] S4 domain78.990.7994
43 Mapoly0033s0117 [PTHR11721:SF3] SUBFAMILY NOT NAMED; [PF00828] Ribosomal protein L18e/L15; [PTHR11721] 60S RIBOSOMAL PROTEIN L27A; [K02900] large subunit ribosomal protein L27Ae; [KOG1742] 60s ribosomal protein L15/L2779.520.7978
44 Mapoly0086s0019 -81.200.7911
45 Mapoly0008s0274 [GO:0005783] endoplasmic reticulum; [PTHR20994] UNCHARACTERIZED; [GO:0016021] integral to membrane; [GO:0072546] ER membrane protein complex; [KOG4455] Uncharacterized conserved protein; [PF07019] Rab5-interacting protein (Rab5ip); [PTHR20994:SF0] SUBFAMILY NOT NAMED81.720.7775
46 Mapoly0090s0007 [PTHR14154] UPF0041 BRAIN PROTEIN 44-RELATED; [GO:0006850] mitochondrial pyruvate transport; [GO:0005743] mitochondrial inner membrane; [KOG1589] Uncharacterized conserved protein; [PTHR14154:SF3] BRAIN PROTEIN 44-LIKE; [PF03650] Uncharacterised protein family (UPF0041)83.390.7780
47 Mapoly0014s0113 -84.500.7953
48 Mapoly0007s0277 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [KOG1762] 60s acidic ribosomal protein P1; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [K02942] large subunit ribosomal protein LP1; [PF00428] 60s Acidic ribosomal protein84.850.7952
49 Mapoly0159s0014 -84.850.7922
50 Mapoly0052s0059 [GO:0005801] cis-Golgi network; [PF04099] Sybindin-like family; [KOG3368] Transport protein particle (TRAPP) complex subunit; [PTHR23249] SYNBINDIN; [GO:0006888] ER to Golgi vesicle-mediated transport86.520.7936
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