Guide Gene
- Gene ID
- Mapoly0003s0262
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Coexpressed Gene List
Search : Show :Showing 1 to 50 of 200 records
Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0003s0262 [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00 1.0000 1 Mapoly0094s0032 [PF08576] Eukaryotic protein of unknown function (DUF1764) 1.73 0.8017 2 Mapoly0084s0068 [PTHR10971] MRNA EXPORT FACTOR AND BUB3; [GO:0005515] protein binding; [K14298] mRNA export factor; [PTHR10971:SF11] MRNA EXPORT FACTOR; [PF00400] WD domain, G-beta repeat; [KOG0647] mRNA export protein (contains WD40 repeats) 7.87 0.7817 3 Mapoly0112s0059 [GO:0005524] ATP binding; [KOG0328] Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily; [PTHR24031:SF57] SUBFAMILY NOT NAMED; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [K13025] ATP-dependent RNA helicase [EC:3.6.4.13]; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 12.85 0.7468 4 Mapoly0091s0022 [KOG1521] RNA polymerase I and III, subunit RPA40/RPC40; [GO:0046983] protein dimerization activity; [PTHR11800:SF13] DNA-DIRECTED RNA POLYMERASE I; [PF01000] RNA polymerase Rpb3/RpoA insert domain; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11800] DNA-DIRECTED RNA POLYMERASE; [PF01193] RNA polymerase Rpb3/Rpb11 dimerisation domain 13.19 0.7595 5 Mapoly0023s0164 [GO:0003723] RNA binding; [GO:0004523] ribonuclease H activity; [PF01351] Ribonuclease HII; [PTHR10954] RIBONUCLEASE H2 SUBUNIT A 13.64 0.7444 6 Mapoly0078s0032 [PF06325] Ribosomal protein L11 methyltransferase (PrmA); [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [GO:0005737] cytoplasm; [K11434] protein arginine N-methyltransferase 1 [EC:2.1.1.-]; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [GO:0008276] protein methyltransferase activity; [GO:0006479] protein methylation; [KOG1499] Protein arginine N-methyltransferase PRMT1 and related enzymes 19.80 0.7515 7 Mapoly0011s0012 [GO:0016020] membrane; [KOG2620] Prohibitins and stomatins of the PID superfamily; [PTHR10264] BAND 7 PROTEIN-RELATED; [PTHR10264:SF27] UNCHARACTERIZED; [PF01145] SPFH domain / Band 7 family 22.05 0.7373 8 Mapoly0197s0012 [GO:0005515] protein binding; [K03030] 26S proteasome regulatory subunit N11; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1555] 26S proteasome regulatory complex, subunit RPN11; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [PTHR10410:SF5] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 14 28.98 0.6744 9 Mapoly0074s0056 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PF03948] Ribosomal protein L9, C-terminal domain; [PF01281] Ribosomal protein L9, N-terminal domain; [PTHR21368] 50S RIBOSOMAL PROTEIN L9; [GO:0005622] intracellular; [GO:0006412] translation 30.46 0.7383 10 Mapoly0014s0124 [PTHR12849] RNA LARIAT DEBRANCHING ENZYME; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [GO:0006397] mRNA processing; [GO:0016788] hydrolase activity, acting on ester bonds; [PF05011] Lariat debranching enzyme, C-terminal domain; [KOG2863] RNA lariat debranching enzyme 31.29 0.7232 11 Mapoly0055s0093 [PF03725] 3' exoribonuclease family, domain 2; [KOG1068] Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases; [PTHR11953] RIBONUCLEASE PH RELATED; [PF01138] 3' exoribonuclease family, domain 1 32.25 0.7058 12 Mapoly0090s0067 [GO:0005515] protein binding; [KOG0302] Ribosome Assembly protein; [PTHR22850] WD40 REPEAT FAMILY; [PF12265] Histone-binding protein RBBP4 or subunit C of CAF1 complex; [PTHR22850:SF6] GLUTAMATE RICH WD REPEAT PROTEIN (GRWD); [PF00400] WD domain, G-beta repeat 35.64 0.7334 13 Mapoly0063s0053 [GO:0003723] RNA binding; [PTHR12686] 3'-5' EXORIBONUCLEASE CSL4-RELATED; [PF14382] Exosome complex exonuclease RRP4 N-terminal region; [KOG3409] Exosomal 3'-5' exoribonuclease complex, subunit ski4 (Csl4); [K07573] exosome complex component CSL4; [PF10447] Exosome component EXOSC1/CSL4; [PTHR12686:SF8] SUBFAMILY NOT NAMED; [GO:0000178] exosome (RNase complex) 36.21 0.7011 14 Mapoly0063s0069 [PTHR32379] FAMILY NOT NAMED; [KOG1709] Guanidinoacetate methyltransferase and related proteins; [PF12796] Ankyrin repeats (3 copies) 36.57 0.7413 15 Mapoly0007s0029 [KOG3165] Predicted nucleic-acid-binding protein, contains PIN domain; [PF04900] Fcf1; [PTHR12416] UNCHARACTERIZED; [GO:0032040] small-subunit processome; [K14566] U3 small nucleolar RNA-associated protein 24 38.92 0.7092 16 Mapoly0152s0013 [PTHR11601] CYSTEINE DESULFURYLASE; [GO:0008152] metabolic process; [KOG1549] Cysteine desulfurase NFS1; [PF00266] Aminotransferase class-V 40.25 0.6611 17 Mapoly0033s0011 [GO:0003723] RNA binding; [PTHR21321] PNAS-3 RELATED; [KOG1004] Exosomal 3'-5' exoribonuclease complex subunit Rrp40; [GO:0000178] exosome (RNase complex) 42.21 0.6884 18 Mapoly0003s0233 - 47.75 0.6769 19 Mapoly0037s0098 [KOG3089] Predicted DEAD-box-containing helicase; [PTHR24030] FAMILY NOT NAMED; [PF14617] U3-containing 90S pre-ribosomal complex subunit 50.99 0.7207 20 Mapoly0013s0064 [KOG1401] Acetylornithine aminotransferase; [PTHR11986] AMINOTRANSFERASE CLASS III; [GO:0030170] pyridoxal phosphate binding; [PTHR11986:SF23] ALANINE-GLYOXYLATE AMINOTRANSFERASE 2; [2.6.1.11] Acetylornithine transaminase.; [GO:0008483] transaminase activity; [PF00202] Aminotransferase class-III; [K00818] acetylornithine aminotransferase [EC:2.6.1.11] 60.28 0.6903 21 Mapoly0066s0109 [K01887] arginyl-tRNA synthetase [EC:6.1.1.19]; [GO:0005524] ATP binding; [PTHR11956] ARGINYL-TRNA SYNTHETASE; [GO:0005737] cytoplasm; [PF05746] DALR anticodon binding domain; [GO:0000166] nucleotide binding; [PF03485] Arginyl tRNA synthetase N terminal domain; [GO:0006420] arginyl-tRNA aminoacylation; [6.1.1.19] Arginine--tRNA ligase.; [KOG4426] Arginyl-tRNA synthetase; [GO:0004814] arginine-tRNA ligase activity; [PTHR11956:SF1] ARGINYL-TRNA SYNTHETASE; [PF00750] tRNA synthetases class I (R) 60.33 0.7160 22 Mapoly0064s0021 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 60.40 0.7229 23 Mapoly0003s0263 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0884] Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K12734] peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8] 60.79 0.6925 24 Mapoly0001s0278 [PF03690] Uncharacterised protein family (UPF0160); [PTHR11215:SF0] SUBFAMILY NOT NAMED; [KOG2948] Predicted metal-binding protein; [PTHR11215] METAL DEPENDENT HYDROLASE - RELATED 61.57 0.7048 25 Mapoly0067s0012 - 64.03 0.6687 26 Mapoly0082s0028 [K00620] glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]; [GO:0006526] arginine biosynthetic process; [2.3.1.1] Amino-acid N-acetyltransferase.; [PTHR23100:SF0] SUBFAMILY NOT NAMED; [GO:0004358] glutamate N-acetyltransferase activity; [PTHR23100] ARGININE BIOSYNTHESIS BIFUNCTIONAL PROTEIN ARGJ; [PF01960] ArgJ family; [2.3.1.35] Glutamate N-acetyltransferase.; [KOG2786] Putative glutamate/ornithine acetyltransferase 65.95 0.6858 27 Mapoly0002s0300 [PTHR21162:SF0] SUBFAMILY NOT NAMED; [PTHR21162] P53 AND DNA DAMAGE-REGULATED PROTEIN 66.51 0.5640 28 Mapoly0049s0058 [GO:0005515] protein binding; [K12880] THO complex subunit 3; [KOG1407] WD40 repeat protein; [PF00400] WD domain, G-beta repeat; [PTHR22839] THO COMPLEX SUBUNIT 3 (THO3) 70.00 0.6202 29 Mapoly0096s0059 - 71.55 0.6834 30 Mapoly0102s0005 [PF06962] Putative rRNA methylase 76.72 0.6653 31 Mapoly0049s0075 [KOG3925] Uncharacterized conserved protein; [PTHR12150:SF13] UNCHARACTERIZED; [PF02598] Putative RNA methyltransferase; [PTHR12150] UNCHARACTERIZED 77.36 0.6989 32 Mapoly0053s0094 [K07442] tRNA (adenine-N1-)-methyltransferase catalytic subunit [EC:2.1.1.36]; [GO:0031515] tRNA (m1A) methyltransferase complex; [GO:0030488] tRNA methylation; [PTHR12133] UNCHARACTERIZED METHYLTRANSFERASE; [PTHR12133:SF2] UNCHARACTERIZED METHYLTRANSFERASE; [2.1.1.36] Transferred entry: 2.1.1.217, 2.1.1.218, 2.1.1.219 and 2.1.1.220.; [PF08704] tRNA methyltransferase complex GCD14 subunit; [GO:0016429] tRNA (adenine-N1-)-methyltransferase activity; [KOG2915] tRNA(1-methyladenosine) methyltransferase, subunit GCD14 79.90 0.6864 33 Mapoly0110s0002 [PTHR13296:SF0] SUBFAMILY NOT NAMED; [K12861] pre-mRNA-splicing factor SPF27; [KOG3096] Spliceosome-associated coiled-coil protein; [PTHR13296] BCAS2 PROTEIN; [GO:0006397] mRNA processing; [PF05700] Breast carcinoma amplified sequence 2 (BCAS2) 81.68 0.6901 34 Mapoly0041s0094 [3.1.26.5] Ribonuclease P.; [PTHR13031] RIBONUCLEASE P-RELATED; [K03539] ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]; [KOG2363] Protein subunit of nuclear ribonuclease P (RNase P); [GO:0008033] tRNA processing; [PF01876] RNase P subunit p30; [GO:0004540] ribonuclease activity 81.72 0.7020 35 Mapoly0051s0055 [PTHR18359] WD-REPEAT PROTEIN-RELATED; [GO:0005515] protein binding; [KOG2055] WD40 repeat protein; [K14553] U3 small nucleolar RNA-associated protein 18; [PF00400] WD domain, G-beta repeat 86.02 0.6989 36 Mapoly0137s0028 - 87.83 0.5945 37 Mapoly0001s0200 [K01778] diaminopimelate epimerase [EC:5.1.1.7]; [PF01678] Diaminopimelate epimerase; [5.1.1.7] Diaminopimelate epimerase.; [GO:0008837] diaminopimelate epimerase activity; [GO:0009089] lysine biosynthetic process via diaminopimelate; [PTHR31689] FAMILY NOT NAMED; [PTHR31689:SF0] SUBFAMILY NOT NAMED 87.99 0.6476 38 Mapoly0047s0093 [PTHR11079] CYTOSINE DEAMINASE; [GO:0016787] hydrolase activity; [PF00383] Cytidine and deoxycytidylate deaminase zinc-binding region; [GO:0008270] zinc ion binding; [KOG1018] Cytosine deaminase FCY1 and related enzymes 90.28 0.6805 39 Mapoly0007s0273 [PTHR30239:SF0] ACETOLACTATE SYNTHASE III, REGULATORY SUBUNIT; [2.2.1.6] Acetolactate synthase.; [PTHR30239] ACETOLACTATE SYNTHASE III, REGULATORY SUBUNIT; [K01653] acetolactate synthase I/III small subunit [EC:2.2.1.6]; [PF13710] ACT domain; [KOG2663] Acetolactate synthase, small subunit; [PF10369] Small subunit of acetolactate synthase 90.55 0.6760 40 Mapoly0098s0036 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation; [PF03719] Ribosomal protein S5, C-terminal domain 90.99 0.6764 41 Mapoly0103s0024 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [PTHR14614:SF6] UNCHARACTERIZED 92.56 0.6577 42 Mapoly0006s0099 [PTHR13261] CDK INHIBITOR P21 BINDING PROTEIN; [KOG3034] Isoamyl acetate-hydrolyzing esterase and related enzymes; [PF13862] p21-C-terminal region-binding protein 97.49 0.6781 43 Mapoly0053s0064 [GO:0016020] membrane; [PTHR12383] PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED; [GO:0008236] serine-type peptidase activity; [KOG1568] Mitochondrial inner membrane protease, subunit IMP2; [K09648] mitochondrial inner membrane protease subunit 2 [EC:3.4.99.-]; [3.4.99.-] Endopeptidases of unknown catalytic mechanism.; [PF00717] Peptidase S24-like; [GO:0006508] proteolysis 99.14 0.6303 44 Mapoly0010s0155 [PF08213] Mitochondrial domain of unknown function (DUF1713) 100.05 0.6567 45 Mapoly0090s0077 [PTHR12049] UNCHARACTERIZED; [PF02636] Putative S-adenosyl-L-methionine-dependent methyltransferase; [PTHR12049:SF6] gb def: duf185, uncharacterized acr, cog1565 [bacillus anthracis a2012] 100.53 0.6603 46 Mapoly0091s0003 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [GO:0030071] regulation of mitotic metaphase/anaphase transition; [KOG1155] Anaphase-promoting complex (APC), Cdc23 subunit; [PF13181] Tetratricopeptide repeat; [PF04049] Anaphase promoting complex subunit 8 / Cdc23; [GO:0005680] anaphase-promoting complex; [PF00515] Tetratricopeptide repeat; [K03355] anaphase-promoting complex subunit 8; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF10] CELL DIVISION CYCLE 23 101.45 0.6717 47 Mapoly0009s0093 [GO:0006289] nucleotide-excision repair; [K03141] transcription initiation factor TFIIH subunit 1; [PF03909] BSD domain; [PTHR12856] TRANSCRIPTION INITIATION FACTOR IIH-RELATED; [GO:0006351] transcription, DNA-dependent; [GO:0000439] core TFIIH complex; [KOG2074] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB1 102.10 0.6889 48 Mapoly0153s0027 [PTHR22889] UNCHARACTERIZED; [KOG1188] WD40 repeat protein; [GO:0005515] protein binding; [PF00400] WD domain, G-beta repeat 104.51 0.6732 49 Mapoly0118s0031 [PTHR13068:SF8] gb def: riken cdna 2410017i18 [mus musculus]; [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED 104.79 0.6721 50 Mapoly0031s0129 [K14561] U3 small nucleolar ribonucleoprotein protein IMP4; [KOG2781] U3 small nucleolar ribonucleoprotein (snoRNP) component; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain 104.83 0.6781