Guide Gene

Gene ID
Mapoly0003s0046
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0016020] membrane; [PTHR12961] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2; [GO:0015031] protein transport; [KOG2307] Low density lipoprotein receptor; [GO:0007030] Golgi organization; [PF06148] COG (conserved oligomeric Golgi) complex component, COG2; [PF12022] Domain of unknown function (DUF3510)

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0292 [KOG1913] Regucalcin gene promoter region-related protein (RGPR); [GO:0048208] COPII vesicle coating; [PF12932] Vesicle coat trafficking protein Sec16 mid-region; [PTHR13402] RGPR-RELATED; [PF12931] Sec23-binding domain of Sec16
Mapoly0003s0046 [GO:0016020] membrane; [PTHR12961] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2; [GO:0015031] protein transport; [KOG2307] Low density lipoprotein receptor; [GO:0007030] Golgi organization; [PF06148] COG (conserved oligomeric Golgi) complex component, COG2; [PF12022] Domain of unknown function (DUF3510)
Mapoly0006s0304 [KOG2033] Low density lipoprotein B-like protein; [PTHR31658:SF0] SUBFAMILY NOT NAMED; [PF08700] Vps51/Vps67; [PTHR31658] FAMILY NOT NAMED
Mapoly0009s0042 [KOG1985] Vesicle coat complex COPII, subunit SEC24/subunit SFB2; [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [PTHR13803:SF4] gb def: SED5-binding protein 3 (SEC24-related protein 3) (Lethal with SEC13 protein 1); [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [K14007] protein transport protein SEC24; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport
Mapoly0013s0180 [PF12329] TATA element modulatory factor 1 DNA binding; [PTHR13140] MYOSIN; [KOG4673] Transcription factor TMF, TATA element modulatory factor; [PF12325] TATA element modulatory factor 1 TATA binding
Mapoly0014s0145 [GO:0008060] ARF GTPase activator activity; [GO:0005737] cytoplasm; [PTHR23180] CENTAURIN/ARF; [GO:0005515] protein binding; [GO:0008270] zinc ion binding; [KOG0521] Putative GTPase activating proteins (GAPs); [GO:0032312] regulation of ARF GTPase activity; [PF00169] PH domain; [PF01412] Putative GTPase activating protein for Arf; [PF03114] BAR domain; [PF12796] Ankyrin repeats (3 copies)
Mapoly0031s0138 [KOG1931] Putative transmembrane protein; [PTHR13251] EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1; [PF11817] Foie gras liver health family 1; [PF12584] Trafficking protein particle complex subunit 10, TRAPPC10
Mapoly0035s0061 [KOG2056] Equilibrative nucleoside transporter protein; [PF01417] ENTH domain; [PTHR12276] EPSIN/ENT-RELATED
Mapoly0036s0102 [PTHR11216] EH DOMAIN; [GO:0005509] calcium ion binding; [PF13202] EF hand; [PF12763] Cytoskeletal-regulatory complex EF hand
Mapoly0038s0024 [PTHR19878] AUTOPHAGY PROTEIN 16-LIKE
Mapoly0053s0042 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PTHR18921] MYOSIN HEAVY CHAIN - RELATED
Mapoly0058s0070 [PF00168] C2 domain; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING
Mapoly0059s0021 [PTHR24012] FAMILY NOT NAMED; [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Mapoly0088s0018 [GO:0008060] ARF GTPase activator activity; [PTHR23180:SF35] PREDICTED: SIMILAR TO G PROTEIN-COUPLED RECEPTOR KINASE INTERACTOR 1, PARTIAL; [KOG0704] ADP-ribosylation factor GTPase activator; [PTHR23180] CENTAURIN/ARF; [GO:0008270] zinc ion binding; [GO:0032312] regulation of ARF GTPase activity; [PF01412] Putative GTPase activating protein for Arf; [K12492] ADP-ribosylation factor GTPase-activating protein 1
Mapoly0095s0011 [PF10475] Protein of unknown function N-terminal domain (DUF2450); [PTHR12965] VACUOLAR PROTEIN SORTING 54; [KOG2115] Vacuolar sorting protein VPS45; [PTHR12965:SF0] SUBFAMILY NOT NAMED; [GO:0042147] retrograde transport, endosome to Golgi; [PF07928] Vps54-like protein
Mapoly0100s0023 [GO:0005086] ARF guanyl-nucleotide exchange factor activity; [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [PF01369] Sec7 domain; [GO:0032012] regulation of ARF protein signal transduction; [KOG0928] Pattern-formation protein/guanine nucleotide exchange factor
Mapoly0102s0039 [GO:0005524] ATP binding; [KOG0576] Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE
Mapoly0112s0026 [PF11987] Translation-initiation factor 2; [KOG1144] Translation initiation factor 5B (eIF-5B); [PF00009] Elongation factor Tu GTP binding domain; [GO:0003924] GTPase activity; [PF14578] Elongation factor Tu domain 4; [PTHR23115] TRANSLATION FACTOR; [K03243] translation initiation factor eIF-5B; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2
Mapoly0113s0011 [K03165] DNA topoisomerase III [EC:5.99.1.2]; [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PF06839] GRF zinc finger; [PF01751] Toprim domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0006265] DNA topological change; [KOG1956] DNA topoisomerase III alpha; [PF01396] Topoisomerase DNA binding C4 zinc finger; [GO:0005694] chromosome; [GO:0003916] DNA topoisomerase activity; [GO:0003676] nucleic acid binding; [PTHR11390:SF23] DNA TOPOISOMERASE I-RELATED; [PTHR11390] PROKARYOTIC DNA TOPOISOMERASE; [5.99.1.2] DNA topoisomerase.; [PF01131] DNA topoisomerase
Mapoly0167s0007 [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [GO:0015031] protein transport; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [KOG1848] Uncharacterized conserved protein
Mapoly0224s0002 -