Guide Gene

Gene ID
Mapoly0009s0042
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG1985] Vesicle coat complex COPII, subunit SEC24/subunit SFB2; [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [PTHR13803:SF4] gb def: SED5-binding protein 3 (SEC24-related protein 3) (Lethal with SEC13 protein 1); [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [K14007] protein transport protein SEC24; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0045 [GO:0072546] ER membrane protein complex; [PTHR21573:SF0] SUBFAMILY NOT NAMED; [PF13360] PQQ-like domain; [KOG2103] Uncharacterized conserved protein; [PF07774] Protein of unknown function (DUF1620); [PTHR21573] UNCHARACTERIZED
Mapoly0001s0131 [K00813] aspartate aminotransferase [EC:2.6.1.1]; [2.6.1.1] Aspartate transaminase.; [GO:0006520] cellular amino acid metabolic process; [PTHR11879:SF1] gb def: aspartate/aromatic aminotransferase fusobacterium nucleatum subsp. nucleatum at; [PTHR11879] ASPARTATE AMINOTRANSFERASE; [PF00155] Aminotransferase class I and II; [GO:0009058] biosynthetic process; [GO:0008483] transaminase activity; [GO:0030170] pyridoxal phosphate binding; [KOG1411] Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2
Mapoly0002s0320 [PF13620] Carboxypeptidase regulatory-like domain; [PTHR23303] CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING; [KOG1948] Metalloproteinase-related collagenase pM5
Mapoly0002s0327 [K01552] arsenite-transporting ATPase [EC:3.6.3.16]; [KOG0209] P-type ATPase; [GO:0000166] nucleotide binding; [GO:0016021] integral to membrane; [PF00702] haloacid dehalogenase-like hydrolase; [GO:0016887] ATPase activity; [3.6.3.-] Acting on acid anhydrides; catalyzing transmembrane movement of substances.; [GO:0006812] cation transport; [PTHR24093] FAMILY NOT NAMED; [PTHR24093:SF82] ATPASE, P-TYPE, HAD SUPERFAMILY, SUBFAMILY IC, PUTATIVE; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase
Mapoly0003s0046 [GO:0016020] membrane; [PTHR12961] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2; [GO:0015031] protein transport; [KOG2307] Low density lipoprotein receptor; [GO:0007030] Golgi organization; [PF06148] COG (conserved oligomeric Golgi) complex component, COG2; [PF12022] Domain of unknown function (DUF3510)
Mapoly0003s0171 [GO:0005086] ARF guanyl-nucleotide exchange factor activity; [PF09324] Domain of unknown function (DUF1981); [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [KOG0929] Guanine nucleotide exchange factor; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [K13462] guanine nucleotide-exchange factor; [PF01369] Sec7 domain; [GO:0032012] regulation of ARF protein signal transduction
Mapoly0005s0083 [PF01602] Adaptin N terminal region; [GO:0016192] vesicle-mediated transport; [GO:0030126] COPI vesicle coat; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [KOG1078] Vesicle coat complex COPI, gamma subunit; [PF08752] Coatomer gamma subunit appendage platform subdomain; [GO:0005198] structural molecule activity; [PTHR10261] COATOMER SUBUNIT GAMMA
Mapoly0005s0185 [PTHR10811] FRINGE-RELATED; [KOG2246] Galactosyltransferases; [PF04646] Protein of unknown function, DUF604
Mapoly0009s0042 [KOG1985] Vesicle coat complex COPII, subunit SEC24/subunit SFB2; [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [PTHR13803:SF4] gb def: SED5-binding protein 3 (SEC24-related protein 3) (Lethal with SEC13 protein 1); [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [K14007] protein transport protein SEC24; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport
Mapoly0013s0180 [PF12329] TATA element modulatory factor 1 DNA binding; [PTHR13140] MYOSIN; [KOG4673] Transcription factor TMF, TATA element modulatory factor; [PF12325] TATA element modulatory factor 1 TATA binding
Mapoly0022s0045 [PTHR10121:SF0] COATOMER SUBUNIT DELTA; [GO:0016192] vesicle-mediated transport; [GO:0005515] protein binding; [GO:0030126] COPI vesicle coat; [PF00928] Adaptor complexes medium subunit family; [KOG2635] Medium subunit of clathrin adaptor complex; [GO:0006890] retrograde vesicle-mediated transport, Golgi to ER; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [PTHR10121] COATOMER SUBUNIT DELTA
Mapoly0022s0125 [PTHR19876:SF2] COATOMER BETA SUBUNIT; [GO:0016192] vesicle-mediated transport; [KOG0276] Vesicle coat complex COPI, beta' subunit; [GO:0005515] protein binding; [PTHR19876] COATOMER; [PF04053] Coatomer WD associated region; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [GO:0005198] structural molecule activity; [PF00400] WD domain, G-beta repeat
Mapoly0022s0165 [GO:0003714] transcription corepressor activity; [PF12070] Protein of unknown function (DUF3550/UPF0682); [PTHR21243] FAMILY NOT NAMED; [GO:0006351] transcription, DNA-dependent
Mapoly0045s0097 [GO:0030130] clathrin coat of trans-Golgi network vesicle; [PF00637] Region in Clathrin and VPS; [GO:0016192] vesicle-mediated transport; [PF09268] Clathrin, heavy-chain linker; [PF13838] Clathrin-H-link; [K04646] clathrin heavy chain; [GO:0006886] intracellular protein transport; [GO:0030132] clathrin coat of coated pit; [KOG0985] Vesicle coat protein clathrin, heavy chain; [PF01394] Clathrin propeller repeat; [GO:0005198] structural molecule activity; [PTHR10292] CLATHRIN HEAVY CHAIN
Mapoly0086s0049 [PF01602] Adaptin N terminal region; [GO:0005737] cytoplasm; [GO:0016192] vesicle-mediated transport; [PF07718] Coatomer beta C-terminal region; [PF14806] Coatomer beta subunit appendage platform; [GO:0030126] COPI vesicle coat; [KOG1058] Vesicle coat complex COPI, beta subunit; [PTHR10635] COATOMER SUBUNIT BETA; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [GO:0005198] structural molecule activity
Mapoly0095s0011 [PF10475] Protein of unknown function N-terminal domain (DUF2450); [PTHR12965] VACUOLAR PROTEIN SORTING 54; [KOG2115] Vacuolar sorting protein VPS45; [PTHR12965:SF0] SUBFAMILY NOT NAMED; [GO:0042147] retrograde transport, endosome to Golgi; [PF07928] Vps54-like protein
Mapoly0101s0033 [PTHR21663] HYPOTHETICAL HEAT DOMAIN-CONTAINING; [KOG1822] Uncharacterized conserved protein; [PTHR21663:SF0] SUBFAMILY NOT NAMED
Mapoly0112s0026 [PF11987] Translation-initiation factor 2; [KOG1144] Translation initiation factor 5B (eIF-5B); [PF00009] Elongation factor Tu GTP binding domain; [GO:0003924] GTPase activity; [PF14578] Elongation factor Tu domain 4; [PTHR23115] TRANSLATION FACTOR; [K03243] translation initiation factor eIF-5B; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2
Mapoly0125s0045 [PF05664] Protein of unknown function (DUF810); [PTHR31280] FAMILY NOT NAMED
Mapoly0146s0008 [GO:0008641] small protein activating enzyme activity; [GO:0005524] ATP binding; [PF09358] Ubiquitin-activating enzyme e1 C-terminal domain; [PF00899] ThiF family; [PF02134] Repeat in ubiquitin-activating (UBA) protein; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [KOG2012] Ubiquitin activating enzyme UBA1; [PF10585] Ubiquitin-activating enzyme active site; [GO:0006464] cellular protein modification process; [K03178] ubiquitin-activating enzyme E1 [EC:6.3.2.19]; [PTHR10953:SF4] UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 1 (UBIQUITIN-ACTIVATING ENZYME E1)
Mapoly0224s0002 -