Guide Gene

Gene ID
Mapoly0001s0065
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0019867] outer membrane; [PF07244] Surface antigen variable number repeat; [PF01103] Surface antigen; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0065 [GO:0019867] outer membrane; [PF07244] Surface antigen variable number repeat; [PF01103] Surface antigen; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN 0.00 1.0000
1 Mapoly0011s0194 [PF02897] Prolyl oligopeptidase, N-terminal beta-propeller domain; [GO:0008236] serine-type peptidase activity; [PTHR11757:SF3] OLIGOPEPTIDASE B (LYSYL AND ARGININYL OLIGOPEPTIDASE); [3.4.21.83] Oligopeptidase B.; [GO:0070008] serine-type exopeptidase activity; [K01354] oligopeptidase B [EC:3.4.21.83]; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis; [PTHR11757] PROTEASE FAMILY S9A OLIGOPEPTIDASE; [PF00326] Prolyl oligopeptidase family; [KOG2237] Predicted serine protease1.410.8339
2 Mapoly0043s0090 [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)3.870.8101
3 Mapoly0002s0007 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PTHR21600] RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B; [PF01479] S4 domain4.240.7853
4 Mapoly0067s0015 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [PF09273] Rubisco LSMT substrate-binding4.240.7899
5 Mapoly0045s0080 [GO:0004659] prenyltransferase activity; [GO:0016021] integral to membrane; [2.5.1.62] Chlorophyll synthase.; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family; [K04040] chlorophyll synthase [EC:2.5.1.62]; [KOG1381] Para-hydroxybenzoate-polyprenyl transferase5.390.8383
6 Mapoly0083s0034 -8.250.7996
7 Mapoly0001s0238 [PF02978] Signal peptide binding domain; [GO:0048500] signal recognition particle; [PF00448] SRP54-type protein, GTPase domain; [GO:0008312] 7S RNA binding; [K03106] signal recognition particle subunit SRP54; [KOG0780] Signal recognition particle, subunit Srp54; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564:SF5] SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS10.250.7501
8 Mapoly0060s0013 [6.3.4.14] Biotin carboxylase.; [GO:0005524] ATP binding; [GO:0016874] ligase activity; [PF02785] Biotin carboxylase C-terminal domain; [PF00289] Carbamoyl-phosphate synthase L chain, N-terminal domain; [6.4.1.2] Acetyl-CoA carboxylase.; [GO:0008152] metabolic process; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE; [GO:0003824] catalytic activity; [K01961] acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]; [PF02786] Carbamoyl-phosphate synthase L chain, ATP binding domain10.580.7899
9 Mapoly0069s0029 [PTHR10795:SF157] UNCHARACTERIZED; [KOG1114] Tripeptidyl peptidase II; [K01280] tripeptidyl-peptidase II [EC:3.4.14.10]; [GO:0004252] serine-type endopeptidase activity; [3.4.14.10] Tripeptidyl-peptidase II.; [PF00082] Subtilase family; [PF12580] Tripeptidyl peptidase II; [GO:0006508] proteolysis; [PTHR10795] PROPROTEIN CONVERTASE SUBTILISIN/KEXIN12.250.7830
10 Mapoly0004s0122 [PF07498] Rho termination factor, N-terminal domain; [GO:0006353] DNA-dependent transcription, termination15.490.7968
11 Mapoly0001s0497 -16.250.7729
12 Mapoly0013s0072 [PTHR16092] SEC3/SYNTAXIN-RELATED; [PF09763] Exocyst complex component Sec3; [KOG2148] Exocyst protein Sec3; [PF15277] Exocyst complex component SEC3 N-terminal PIP2 binding PH17.890.7220
13 Mapoly0038s0048 [GO:0005737] cytoplasm; [PF08597] Translation initiation factor eIF3 subunit; [GO:0003743] translation initiation factor activity; [K03245] translation initiation factor eIF-3 subunit 1; [PTHR21681] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 1; [GO:0005852] eukaryotic translation initiation factor 3 complex; [KOG4813] Translation initiation factor eIF3, p35 subunit21.170.7323
14 Mapoly0066s0055 [PF04278] Tic22-like family22.090.7889
15 Mapoly0002s0035 -27.060.7693
16 Mapoly0086s0041 [GO:0050660] flavin adenine dinucleotide binding; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [1.8.1.4] Dihydrolipoyl dehydrogenase.; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [K00382] dihydrolipoamide dehydrogenase [EC:1.8.1.4]; [GO:0016491] oxidoreductase activity; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [KOG1335] Dihydrolipoamide dehydrogenase; [PF07992] Pyridine nucleotide-disulphide oxidoreductase27.390.7631
17 Mapoly0038s0098 [K03351] anaphase-promoting complex subunit 4; [PF12896] Anaphase-promoting complex, cyclosome, subunit 4; [KOG4640] Anaphase-promoting complex (APC), subunit 4; [GO:0030071] regulation of mitotic metaphase/anaphase transition; [PF12894] Anaphase-promoting complex subunit 4 WD40 domain; [PTHR13260] ANAPHASE PROMOTING COMPLEX SUBUNIT 4 (APC4) (CYCLOSOME SUBUNIT 4); [GO:0005680] anaphase-promoting complex; [GO:0031145] anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process27.840.7328
18 Mapoly0035s0045 [GO:0005524] ATP binding; [KOG0332] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K01529] dynamin GTPase [EC:3.6.5.5]; [3.6.1.-] In phosphorous-containing anhydrides.28.500.7354
19 Mapoly0016s0043 [2.7.2.4] Aspartate kinase.; [PF00742] Homoserine dehydrogenase; [GO:0016597] amino acid binding; [PTHR21499] ASPARTATE KINASE; [PF01842] ACT domain; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PF00696] Amino acid kinase family; [GO:0008152] metabolic process; [GO:0006520] cellular amino acid metabolic process; [K12524] bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]; [KOG0455] Homoserine dehydrogenase; [GO:0050661] NADP binding; [PF03447] Homoserine dehydrogenase, NAD binding domain; [1.1.1.3] Homoserine dehydrogenase.28.570.7561
20 Mapoly0033s0134 [PTHR20836] DIHYDRODIPICOLINATE REDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0070402] NADPH binding; [PF01113] Dihydrodipicolinate reductase, N-terminus; [K00215] dihydrodipicolinate reductase [EC:1.3.1.26]; [PF05173] Dihydrodipicolinate reductase, C-terminus; [1.3.1.26] Transferred entry: 1.17.1.8.; [PTHR20836:SF0] SUBFAMILY NOT NAMED; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0008839] 4-hydroxy-tetrahydrodipicolinate reductase29.700.7539
21 Mapoly0112s0033 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PTHR13140] MYOSIN31.500.6955
22 Mapoly0033s0031 [GO:0005524] ATP binding; [GO:0050515] 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; [PTHR20861] HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE; [PF00288] GHMP kinases N terminal domain; [PTHR20861:SF2] 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE; [2.7.1.148] 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase.; [GO:0016114] terpenoid biosynthetic process; [K00919] 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]31.750.7277
23 Mapoly0049s0045 [PF13301] Protein of unknown function (DUF4079)33.050.6814
24 Mapoly0030s0106 [GO:0031072] heat shock protein binding; [KOG0715] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24076] FAMILY NOT NAMED; [PF00684] DnaJ central domain; [GO:0051082] unfolded protein binding34.090.7632
25 Mapoly0029s0077 [KOG1211] Amidases; [PTHR11895] AMIDASE; [GO:0016884] carbon-nitrogen ligase activity, with glutamine as amido-N-donor; [PTHR11895:SF7] GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A; [PF01425] Amidase34.640.7458
26 Mapoly0008s0217 [GO:0000287] magnesium ion binding; [PF00719] Inorganic pyrophosphatase; [3.6.1.1] Inorganic diphosphatase.; [GO:0004427] inorganic diphosphatase activity; [GO:0005737] cytoplasm; [K01507] inorganic pyrophosphatase [EC:3.6.1.1]; [GO:0006796] phosphate-containing compound metabolic process; [KOG1626] Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38; [PTHR10286] INORGANIC PYROPHOSPHATASE36.440.7616
27 Mapoly0033s0016 [PTHR30523:SF0] PHOSPHOENOLPYRUVATE CARBOXYLASE; [GO:0006099] tricarboxylic acid cycle; [PTHR30523] PHOSPHOENOLPYRUVATE CARBOXYLASE; [PF00311] Phosphoenolpyruvate carboxylase; [GO:0008964] phosphoenolpyruvate carboxylase activity; [4.1.1.31] Phosphoenolpyruvate carboxylase.; [GO:0015977] carbon fixation; [K01595] phosphoenolpyruvate carboxylase [EC:4.1.1.31]38.240.7298
28 Mapoly0024s0126 [GO:0004471] malate dehydrogenase (decarboxylating) activity; [PF00390] Malic enzyme, N-terminal domain; [GO:0055114] oxidation-reduction process; [PTHR23406] MALIC ENZYME-RELATED; [PF03949] Malic enzyme, NAD binding domain; [KOG1257] NADP+-dependent malic enzyme; [GO:0051287] NAD binding; [PTHR23406:SF2] MALIC ENZYME40.800.7091
29 Mapoly0014s0048 [1.11.1.15] Peroxiredoxin.; [GO:0055114] oxidation-reduction process; [GO:0016209] antioxidant activity; [KOG0852] Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes; [PTHR10681] THIOREDOXIN PEROXIDASE; [PF00578] AhpC/TSA family; [GO:0016491] oxidoreductase activity; [K03386] peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]; [GO:0051920] peroxiredoxin activity; [PF10417] C-terminal domain of 1-Cys peroxiredoxin40.950.7660
30 Mapoly0029s0091 [PF13855] Leucine rich repeat; [GO:0005515] protein binding; [PTHR23155] LEUCINE-RICH REPEAT-CONTAINING PROTEIN; [PF12799] Leucine Rich repeats (2 copies); [KOG0472] Leucine-rich repeat protein43.590.6691
31 Mapoly0056s0020 [PF04548] AIG1 family; [PTHR10903] GTPASE, IMAP FAMILY MEMBER-RELATED; [GO:0005525] GTP binding44.500.7321
32 Mapoly0031s0052 -48.990.6693
33 Mapoly0151s0030 [PF00557] Metallopeptidase family M24; [PTHR10804:SF11] PROLIFERATION-ASSOCIATED PROTEIN 2G4; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P); [KOG2776] Metallopeptidase50.200.7342
34 Mapoly0006s0179 [PF00773] RNB domain; [PTHR23355] RIBONUCLEASE; [KOG2102] Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis353.150.7437
35 Mapoly0024s0038 [GO:0002161] aminoacyl-tRNA editing activity; [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [6.1.1.4] Leucine--tRNA ligase.; [KOG0435] Leucyl-tRNA synthetase; [PF13603] Leucyl-tRNA synthetase, Domain 2; [PTHR11946:SF7] LEUCYL-TRNA SYNTHETASE; [GO:0004823] leucine-tRNA ligase activity; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0006429] leucyl-tRNA aminoacylation; [K01869] leucyl-tRNA synthetase [EC:6.1.1.4]; [PF09334] tRNA synthetases class I (M); [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity54.200.7417
36 Mapoly0030s0078 [GO:0016597] amino acid binding; [PF01842] ACT domain; [GO:0006099] tricarboxylic acid cycle; [PTHR30523] PHOSPHOENOLPYRUVATE CARBOXYLASE; [PF00311] Phosphoenolpyruvate carboxylase; [GO:0008152] metabolic process; [GO:0008964] phosphoenolpyruvate carboxylase activity; [GO:0015977] carbon fixation54.260.6724
37 Mapoly0125s0012 [GO:0016020] membrane; [GO:0005524] ATP binding; [PF08370] Plant PDR ABC transporter associated; [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF14510] ABC-transporter extracellular N-terminal; [KOG0065] Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily; [PF00005] ABC transporter57.500.6978
38 Mapoly0044s0089 [PF13578] Methyltransferase domain57.620.6373
39 Mapoly0153s0017 [PTHR12860] SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN; [KOG2460] Signal recognition particle, subunit Srp68; [K03107] signal recognition particle subunit SRP6857.880.6925
40 Mapoly0071s0016 [PF00183] Hsp90 protein; [GO:0005524] ATP binding; [GO:0006950] response to stress; [PTHR11528:SF41] SUBFAMILY NOT NAMED; [GO:0006457] protein folding; [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PTHR11528] HEAT SHOCK PROTEIN 90; [KOG0019] Molecular chaperone (HSP90 family); [GO:0051082] unfolded protein binding57.920.6956
41 Mapoly0157s0018 [GO:0000287] magnesium ion binding; [GO:0005737] cytoplasm; [PTHR21403:SF1] ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE); [GO:0000105] histidine biosynthetic process; [K00765] ATP phosphoribosyltransferase [EC:2.4.2.17]; [PF01634] ATP phosphoribosyltransferase; [PF08029] HisG, C-terminal domain; [GO:0003879] ATP phosphoribosyltransferase activity; [2.4.2.17] ATP phosphoribosyltransferase.; [KOG2831] ATP phosphoribosyltransferase; [PTHR21403] ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE)61.700.7071
42 Mapoly0005s0054 [GO:0003913] DNA photolyase activity; [PTHR11455] CRYPTOCHROME; [PF00875] DNA photolyase; [PF03441] FAD binding domain of DNA photolyase; [GO:0006281] DNA repair63.320.7513
43 Mapoly0022s0090 [KOG0959] N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily; [PTHR11851:SF34] PITRILYSIN; [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16)64.810.6660
44 Mapoly0174s0005 [3.4.11.1] Leucyl aminopeptidase.; [GO:0004177] aminopeptidase activity; [KOG2597] Predicted aminopeptidase of the M17 family; [PTHR11963:SF11] CYTOSOL AMINOPEPTIDASE; [GO:0005622] intracellular; [PTHR11963] LEUCINE AMINOPEPTIDASE-RELATED; [GO:0006508] proteolysis; [PF00883] Cytosol aminopeptidase family, catalytic domain; [PF02789] Cytosol aminopeptidase family, N-terminal domain; [K01255] leucyl aminopeptidase [EC:3.4.11.1]66.870.7129
45 Mapoly0012s0037 [PTHR11751:SF22] AMINOTRANSFERASE RELATED; [GO:0009058] biosynthetic process; [K10206] LL-diaminopimelate aminotransferase [EC:2.6.1.83]; [GO:0030170] pyridoxal phosphate binding; [2.6.1.83] LL-diaminopimelate aminotransferase.; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0010285] L,L-diaminopimelate aminotransferase activity; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED67.040.7160
46 Mapoly0019s0083 [PTHR20854] INOSITOL MONOPHOSPHATASE; [GO:0046854] phosphatidylinositol phosphorylation; [PF00459] Inositol monophosphatase family; [PTHR20854:SF4] MYO INOSITOL MONOPHOSPHATASE; [KOG2951] Inositol monophosphatase70.100.6322
47 Mapoly0021s0145 [PF02493] MORN repeat72.660.7003
48 Mapoly0019s0016 [PF00574] Clp protease; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit74.300.7477
49 Mapoly0005s0203 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF00313] 'Cold-shock' DNA-binding domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [PTHR11544] COLD SHOCK DOMAIN CONTAINING PROTEINS; [K09250] cellular nucleic acid-binding protein; [GO:0003676] nucleic acid binding; [KOG3070] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing74.480.7252
50 Mapoly0008s0037 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding74.570.7511
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