Guide Gene

Gene ID
Mapoly0060s0013
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[6.3.4.14] Biotin carboxylase.; [GO:0005524] ATP binding; [GO:0016874] ligase activity; [PF02785] Biotin carboxylase C-terminal domain; [PF00289] Carbamoyl-phosphate synthase L chain, N-terminal domain; [6.4.1.2] Acetyl-CoA carboxylase.; [GO:0008152] metabolic process; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE; [GO:0003824] catalytic activity; [K01961] acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]; [PF02786] Carbamoyl-phosphate synthase L chain, ATP binding domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0060s0013 [6.3.4.14] Biotin carboxylase.; [GO:0005524] ATP binding; [GO:0016874] ligase activity; [PF02785] Biotin carboxylase C-terminal domain; [PF00289] Carbamoyl-phosphate synthase L chain, N-terminal domain; [6.4.1.2] Acetyl-CoA carboxylase.; [GO:0008152] metabolic process; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE; [GO:0003824] catalytic activity; [K01961] acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]; [PF02786] Carbamoyl-phosphate synthase L chain, ATP binding domain 0.00 1.0000
1 Mapoly0086s0041 [GO:0050660] flavin adenine dinucleotide binding; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [1.8.1.4] Dihydrolipoyl dehydrogenase.; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [K00382] dihydrolipoamide dehydrogenase [EC:1.8.1.4]; [GO:0016491] oxidoreductase activity; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [KOG1335] Dihydrolipoamide dehydrogenase; [PF07992] Pyridine nucleotide-disulphide oxidoreductase1.000.8872
2 Mapoly0015s0079 [GO:0016020] membrane; [PTHR21257] STEROL REDUCTASE/LAMIN B RECEPTOR; [PTHR21257:SF22] SUBFAMILY NOT NAMED; [1.3.1.21] 7-dehydrocholesterol reductase.; [KOG1435] Sterol reductase/lamin B receptor; [K00213] 7-dehydrocholesterol reductase [EC:1.3.1.21]; [PF01222] Ergosterol biosynthesis ERG4/ERG24 family1.410.8676
3 Mapoly0190s0010 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [PTHR10801:SF0] 24-DEHYDROCHOLESTEROL REDUCTASE; [GO:0050660] flavin adenine dinucleotide binding; [KOG1262] FAD-binding protein DIMINUTO; [K09828] delta24-sterol reductase [EC:1.3.1.72]; [GO:0055114] oxidation-reduction process; [1.3.1.72] Delta(24)-sterol reductase.; [GO:0016491] oxidoreductase activity; [PTHR10801] 24-DEHYDROCHOLESTEROL REDUCTASE; [PF01565] FAD binding domain2.830.8092
4 Mapoly0009s0078 [K00645] [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]; [KOG2926] Malonyl-CoA:ACP transacylase; [2.3.1.39] [Acyl-carrier-protein] S-malonyltransferase.; [PTHR10982] MALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE; [PF00698] Acyl transferase domain3.460.8163
5 Mapoly0148s0041 [PTHR24312] FAMILY NOT NAMED; [KOG1200] Mitochondrial/plastidial beta-ketoacyl-ACP reductase; [GO:0016491] oxidoreductase activity; [PTHR24312:SF0] SUBFAMILY NOT NAMED; [GO:0008152] metabolic process; [1.1.1.100] 3-oxoacyl-[acyl-carrier-protein] reductase.; [K00059] 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]; [PF00106] short chain dehydrogenase3.460.8427
6 Mapoly0082s0078 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [K02160] acetyl-CoA carboxylase biotin carboxyl carrier protein; [PF00364] Biotin-requiring enzyme5.000.8190
7 Mapoly0041s0151 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [2.3.1.12] Dihydrolipoyllysine-residue acetyltransferase.; [PF00364] Biotin-requiring enzyme; [KOG0557] Dihydrolipoamide acetyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [K00627] pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [PF02817] e3 binding domain5.290.8160
8 Mapoly0184s0017 [PTHR19353:SF10] DELTA-5 FATTY ACID DESATURASE; [PTHR19353] FATTY ACID DESATURASE 2; [GO:0020037] heme binding; [PF00487] Fatty acid desaturase; [KOG4232] Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase; [PF00173] Cytochrome b5-like Heme/Steroid binding domain; [GO:0006629] lipid metabolic process6.160.7780
9 Mapoly0067s0081 [GO:0003723] RNA binding; [K13126] polyadenylate-binding protein; [PF00658] Poly-adenylate binding protein, unique domain; [KOG0123] Polyadenylate-binding protein (RRM superfamily); [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)6.710.8070
10 Mapoly0002s0035 -7.750.8290
11 Mapoly0083s0025 [K01962] acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]; [PTHR22855] ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED; [GO:0006633] fatty acid biosynthetic process; [GO:0003989] acetyl-CoA carboxylase activity; [6.4.1.2] Acetyl-CoA carboxylase.; [GO:0009317] acetyl-CoA carboxylase complex; [PF03255] Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit9.380.7748
12 Mapoly0126s0039 [PF11209] Protein of unknown function (DUF2993)9.490.7518
13 Mapoly0001s0065 [GO:0019867] outer membrane; [PF07244] Surface antigen variable number repeat; [PF01103] Surface antigen; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN10.580.7899
14 Mapoly0006s0267 -11.490.7337
15 Mapoly0052s0126 [K00162] pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]; [KOG0524] Pyruvate dehydrogenase E1, beta subunit; [1.2.4.1] Pyruvate dehydrogenase (acetyl-transferring).; [PTHR11624] DEHYDROGENASE RELATED; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [PF02780] Transketolase, C-terminal domain12.000.7398
16 Mapoly0037s0052 [1.3.1.9] Enoyl-[acyl-carrier-protein] reductase (NADH).; [PTHR24322] FAMILY NOT NAMED; [PF13561] Enoyl-(Acyl carrier protein) reductase; [KOG0725] Reductases with broad range of substrate specificities; [K00208] enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]12.250.7657
17 Mapoly0040s0081 [K00648] 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]; [PF08545] 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; [2.3.1.180] Beta-ketoacyl-[acyl-carrier-protein] synthase III.; [GO:0004315] 3-oxoacyl-[acyl-carrier-protein] synthase activity; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [GO:0006633] fatty acid biosynthetic process; [GO:0008610] lipid biosynthetic process; [PF08541] 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal12.250.7906
18 Mapoly0022s0038 [4.2.1.-] Hydro-lyases.; [K02372] 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; [PTHR30272] (3R)-HYDROXYMYRISTOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE; [PF07977] FabA-like domain14.140.7995
19 Mapoly0043s0090 [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)15.430.7898
20 Mapoly0011s0194 [PF02897] Prolyl oligopeptidase, N-terminal beta-propeller domain; [GO:0008236] serine-type peptidase activity; [PTHR11757:SF3] OLIGOPEPTIDASE B (LYSYL AND ARGININYL OLIGOPEPTIDASE); [3.4.21.83] Oligopeptidase B.; [GO:0070008] serine-type exopeptidase activity; [K01354] oligopeptidase B [EC:3.4.21.83]; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis; [PTHR11757] PROTEASE FAMILY S9A OLIGOPEPTIDASE; [PF00326] Prolyl oligopeptidase family; [KOG2237] Predicted serine protease16.160.7572
21 Mapoly0033s0134 [PTHR20836] DIHYDRODIPICOLINATE REDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0070402] NADPH binding; [PF01113] Dihydrodipicolinate reductase, N-terminus; [K00215] dihydrodipicolinate reductase [EC:1.3.1.26]; [PF05173] Dihydrodipicolinate reductase, C-terminus; [1.3.1.26] Transferred entry: 1.17.1.8.; [PTHR20836:SF0] SUBFAMILY NOT NAMED; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0008839] 4-hydroxy-tetrahydrodipicolinate reductase16.520.7944
22 Mapoly0005s0203 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF00313] 'Cold-shock' DNA-binding domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [PTHR11544] COLD SHOCK DOMAIN CONTAINING PROTEINS; [K09250] cellular nucleic acid-binding protein; [GO:0003676] nucleic acid binding; [KOG3070] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing18.470.7976
23 Mapoly0107s0027 [PTHR10648] SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT; [K03456] protein phosphatase 2 (formerly 2A), regulatory subunit A; [KOG0211] Protein phosphatase 2A regulatory subunit A and related proteins; [PF13646] HEAT repeats19.240.7062
24 Mapoly0041s0099 [PTHR22976] BIOTIN SYNTHASE; [K01012] biotin synthetase [EC:2.8.1.6]; [PF06968] Biotin and Thiamin Synthesis associated domain; [PF04055] Radical SAM superfamily; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [2.8.1.6] Biotin synthase.; [KOG2900] Biotin synthase20.830.7518
25 Mapoly0151s0030 [PF00557] Metallopeptidase family M24; [PTHR10804:SF11] PROLIFERATION-ASSOCIATED PROTEIN 2G4; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P); [KOG2776] Metallopeptidase22.140.7909
26 Mapoly0067s0015 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [PF09273] Rubisco LSMT substrate-binding22.580.7457
27 Mapoly0029s0091 [PF13855] Leucine rich repeat; [GO:0005515] protein binding; [PTHR23155] LEUCINE-RICH REPEAT-CONTAINING PROTEIN; [PF12799] Leucine Rich repeats (2 copies); [KOG0472] Leucine-rich repeat protein24.660.7041
28 Mapoly0154s0021 [GO:0003723] RNA binding; [PTHR23253] EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; [PF02854] MIF4G domain; [GO:0005515] protein binding; [KOG0401] Translation initiation factor 4F, ribosome/mRNA-bridging subunit (eIF-4G); [K03260] translation initiation factor eIF-4F; [PF02847] MA3 domain26.000.7216
29 Mapoly0083s0034 -26.830.7761
30 Mapoly0127s0007 -27.930.7029
31 Mapoly0153s0015 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 227.930.7381
32 Mapoly0024s0110 [GO:0008168] methyltransferase activity; [PTHR10108:SF163] PUTATIVE UNCHARACTERIZED PROTEIN; [PTHR10108] METHYLTRANSFERASE; [K05929] phosphoethanolamine N-methyltransferase [EC:2.1.1.103]; [PF08241] Methyltransferase domain; [2.1.1.103] Phosphoethanolamine N-methyltransferase.; [KOG1269] SAM-dependent methyltransferases; [GO:0008152] metabolic process; [PF13489] Methyltransferase domain30.590.7690
33 Mapoly0036s0103 [KOG2854] Possible pfkB family carbohydrate kinase; [GO:0006166] purine ribonucleoside salvage; [K00856] adenosine kinase [EC:2.7.1.20]; [PTHR10584:SF24] ADENOSINE KINASE; [PF00294] pfkB family carbohydrate kinase; [2.7.1.20] Adenosine kinase.; [GO:0004001] adenosine kinase activity; [PTHR10584] SUGAR KINASE30.590.7812
34 Mapoly0101s0065 [PF12330] Domain of unknown function (DUF3635); [PTHR24419] INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE; [KOG2464] Serine/threonine kinase (haspin family)31.750.7581
35 Mapoly0033s0031 [GO:0005524] ATP binding; [GO:0050515] 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; [PTHR20861] HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE; [PF00288] GHMP kinases N terminal domain; [PTHR20861:SF2] 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE; [2.7.1.148] 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase.; [GO:0016114] terpenoid biosynthetic process; [K00919] 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]34.580.7281
36 Mapoly0007s0096 [4.2.2.2] Pectate lyase.; [K01728] pectate lyase [EC:4.2.2.2]; [PF00544] Pectate lyase; [PTHR31683] FAMILY NOT NAMED36.030.7150
37 Mapoly0005s0054 [GO:0003913] DNA photolyase activity; [PTHR11455] CRYPTOCHROME; [PF00875] DNA photolyase; [PF03441] FAD binding domain of DNA photolyase; [GO:0006281] DNA repair36.170.7959
38 Mapoly0069s0006 [PF05221] S-adenosyl-L-homocysteine hydrolase; [3.3.1.1] Adenosylhomocysteinase.; [GO:0004013] adenosylhomocysteinase activity; [KOG1370] S-adenosylhomocysteine hydrolase; [PTHR23420] ADENOSYLHOMOCYSTEINASE; [GO:0006730] one-carbon metabolic process; [K01251] adenosylhomocysteinase [EC:3.3.1.1]; [PF00670] S-adenosyl-L-homocysteine hydrolase, NAD binding domain38.700.6871
39 Mapoly0024s0031 [PTHR11525:SF0] SUBFAMILY NOT NAMED; [PTHR11525] FARNESYL-PYROPHOSPHATE SYNTHETASE; [2.5.1.1] Dimethylallyltranstransferase.; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [KOG0711] Polyprenyl synthetase; [2.5.1.10] (2E,6E)-farnesyl diphosphate synthase.; [K00787] farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]39.870.6874
40 Mapoly0153s0017 [PTHR12860] SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN; [KOG2460] Signal recognition particle, subunit Srp68; [K03107] signal recognition particle subunit SRP6840.250.7147
41 Mapoly0126s0032 -40.310.7109
42 Mapoly0023s0178 [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0000166] nucleotide binding; [K01866] tyrosyl-tRNA synthetase [EC:6.1.1.1]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [6.1.1.1] Tyrosine--tRNA ligase.; [KOG2144] Tyrosyl-tRNA synthetase, cytoplasmic; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity42.950.7302
43 Mapoly0157s0018 [GO:0000287] magnesium ion binding; [GO:0005737] cytoplasm; [PTHR21403:SF1] ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE); [GO:0000105] histidine biosynthetic process; [K00765] ATP phosphoribosyltransferase [EC:2.4.2.17]; [PF01634] ATP phosphoribosyltransferase; [PF08029] HisG, C-terminal domain; [GO:0003879] ATP phosphoribosyltransferase activity; [2.4.2.17] ATP phosphoribosyltransferase.; [KOG2831] ATP phosphoribosyltransferase; [PTHR21403] ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE)43.010.7389
44 Mapoly0063s0091 [PF13839] GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p; [PTHR32285] FAMILY NOT NAMED; [PF14416] PMR5 N terminal Domain45.280.7260
45 Mapoly0005s0074 [GO:0000287] magnesium ion binding; [PTHR11902] ENOLASE; [PF03952] Enolase, N-terminal domain; [GO:0004634] phosphopyruvate hydratase activity; [GO:0006096] glycolysis; [PF00113] Enolase, C-terminal TIM barrel domain; [4.2.1.11] Phosphopyruvate hydratase.; [GO:0000015] phosphopyruvate hydratase complex; [K01689] enolase [EC:4.2.1.11]; [KOG2670] Enolase46.640.7044
46 Mapoly0014s0048 [1.11.1.15] Peroxiredoxin.; [GO:0055114] oxidation-reduction process; [GO:0016209] antioxidant activity; [KOG0852] Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes; [PTHR10681] THIOREDOXIN PEROXIDASE; [PF00578] AhpC/TSA family; [GO:0016491] oxidoreductase activity; [K03386] peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]; [GO:0051920] peroxiredoxin activity; [PF10417] C-terminal domain of 1-Cys peroxiredoxin48.280.7750
47 Mapoly0007s0188 [PTHR10317] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E; [KOG2758] Translation initiation factor 3, subunit e (eIF-3e); [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [GO:0005515] protein binding; [K03250] translation initiation factor eIF-3 subunit 6; [PF09440] eIF3 subunit 6 N terminal domain; [PF01399] PCI domain; [GO:0005852] eukaryotic translation initiation factor 3 complex50.650.7192
48 Mapoly0112s0033 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PTHR13140] MYOSIN54.550.6779
49 Mapoly0045s0080 [GO:0004659] prenyltransferase activity; [GO:0016021] integral to membrane; [2.5.1.62] Chlorophyll synthase.; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family; [K04040] chlorophyll synthase [EC:2.5.1.62]; [KOG1381] Para-hydroxybenzoate-polyprenyl transferase57.010.7654
50 Mapoly0013s0072 [PTHR16092] SEC3/SYNTAXIN-RELATED; [PF09763] Exocyst complex component Sec3; [KOG2148] Exocyst protein Sec3; [PF15277] Exocyst complex component SEC3 N-terminal PIP2 binding PH57.970.6844
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