Guide Gene
- Gene ID
- Mapoly0033s0134
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR20836] DIHYDRODIPICOLINATE REDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0070402] NADPH binding; [PF01113] Dihydrodipicolinate reductase, N-terminus; [K00215] dihydrodipicolinate reductase [EC:1.3.1.26]; [PF05173] Dihydrodipicolinate reductase, C-terminus; [1.3.1.26] Transferred entry: 1.17.1.8.; [PTHR20836:SF0] SUBFAMILY NOT NAMED; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0008839] 4-hydroxy-tetrahydrodipicolinate reductase
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0033s0134 [PTHR20836] DIHYDRODIPICOLINATE REDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0070402] NADPH binding; [PF01113] Dihydrodipicolinate reductase, N-terminus; [K00215] dihydrodipicolinate reductase [EC:1.3.1.26]; [PF05173] Dihydrodipicolinate reductase, C-terminus; [1.3.1.26] Transferred entry: 1.17.1.8.; [PTHR20836:SF0] SUBFAMILY NOT NAMED; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0008839] 4-hydroxy-tetrahydrodipicolinate reductase 0.00 1.0000 1 Mapoly0012s0037 [PTHR11751:SF22] AMINOTRANSFERASE RELATED; [GO:0009058] biosynthetic process; [K10206] LL-diaminopimelate aminotransferase [EC:2.6.1.83]; [GO:0030170] pyridoxal phosphate binding; [2.6.1.83] LL-diaminopimelate aminotransferase.; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0010285] L,L-diaminopimelate aminotransferase activity; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED 1.73 0.8832 2 Mapoly0022s0038 [4.2.1.-] Hydro-lyases.; [K02372] 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; [PTHR30272] (3R)-HYDROXYMYRISTOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE; [PF07977] FabA-like domain 3.16 0.8567 3 Mapoly0036s0111 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity; [KOG2506] SpoU rRNA Methylase family protein 4.69 0.7935 4 Mapoly0001s0386 [GO:0000287] magnesium ion binding; [KOG0786] 3-isopropylmalate dehydrogenase; [1.1.1.85] 3-isopropylmalate dehydrogenase.; [GO:0055114] oxidation-reduction process; [PF00180] Isocitrate/isopropylmalate dehydrogenase; [K00052] 3-isopropylmalate dehydrogenase [EC:1.1.1.85]; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR11835] DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE; [GO:0051287] NAD binding 5.66 0.8487 5 Mapoly0111s0026 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [K03768] peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]; [5.2.1.8] Peptidylprolyl isomerase.; [KOG0880] Peptidyl-prolyl cis-trans isomerase 5.74 0.8520 6 Mapoly0148s0041 [PTHR24312] FAMILY NOT NAMED; [KOG1200] Mitochondrial/plastidial beta-ketoacyl-ACP reductase; [GO:0016491] oxidoreductase activity; [PTHR24312:SF0] SUBFAMILY NOT NAMED; [GO:0008152] metabolic process; [1.1.1.100] 3-oxoacyl-[acyl-carrier-protein] reductase.; [K00059] 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]; [PF00106] short chain dehydrogenase 6.00 0.8344 7 Mapoly0029s0077 [KOG1211] Amidases; [PTHR11895] AMIDASE; [GO:0016884] carbon-nitrogen ligase activity, with glutamine as amido-N-donor; [PTHR11895:SF7] GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A; [PF01425] Amidase 6.32 0.8255 8 Mapoly0007s0122 [2.6.1.9] Histidinol-phosphate transaminase.; [GO:0009058] biosynthetic process; [KOG0633] Histidinol phosphate aminotransferase; [GO:0030170] pyridoxal phosphate binding; [K00817] histidinol-phosphate aminotransferase [EC:2.6.1.9]; [PF00155] Aminotransferase class I and II; [PTHR11751:SF3] HISTIDINOL-PHOSPHATE AMINOTRANSFERASE; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED 6.63 0.8130 9 Mapoly0012s0199 [PF12049] Protein of unknown function (DUF3531) 10.00 0.7861 10 Mapoly0038s0028 [6.3.4.5] Argininosuccinate synthase.; [GO:0005524] ATP binding; [PF00764] Arginosuccinate synthase; [GO:0004055] argininosuccinate synthase activity; [GO:0006526] arginine biosynthetic process; [PTHR11587] ARGININOSUCCINATE SYNTHASE; [KOG1706] Argininosuccinate synthase; [K01940] argininosuccinate synthase [EC:6.3.4.5] 10.49 0.8201 11 Mapoly0153s0015 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2 11.75 0.7924 12 Mapoly0157s0018 [GO:0000287] magnesium ion binding; [GO:0005737] cytoplasm; [PTHR21403:SF1] ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE); [GO:0000105] histidine biosynthetic process; [K00765] ATP phosphoribosyltransferase [EC:2.4.2.17]; [PF01634] ATP phosphoribosyltransferase; [PF08029] HisG, C-terminal domain; [GO:0003879] ATP phosphoribosyltransferase activity; [2.4.2.17] ATP phosphoribosyltransferase.; [KOG2831] ATP phosphoribosyltransferase; [PTHR21403] ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE) 11.96 0.8066 13 Mapoly0066s0055 [PF04278] Tic22-like family 12.12 0.8268 14 Mapoly0005s0181 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [6.1.1.17] Glutamate--tRNA ligase.; [KOG1149] Glutamyl-tRNA synthetase (mitochondrial); [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17] 12.25 0.8352 15 Mapoly0056s0020 [PF04548] AIG1 family; [PTHR10903] GTPASE, IMAP FAMILY MEMBER-RELATED; [GO:0005525] GTP binding 14.07 0.7977 16 Mapoly0086s0041 [GO:0050660] flavin adenine dinucleotide binding; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [1.8.1.4] Dihydrolipoyl dehydrogenase.; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [K00382] dihydrolipoamide dehydrogenase [EC:1.8.1.4]; [GO:0016491] oxidoreductase activity; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [KOG1335] Dihydrolipoamide dehydrogenase; [PF07992] Pyridine nucleotide-disulphide oxidoreductase 16.43 0.8047 17 Mapoly0120s0006 [GO:0009231] riboflavin biosynthetic process; [PTHR21058] 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE (DMRL SYNTHASE) (LUMAZINE SYNTHASE); [PF00885] 6,7-dimethyl-8-ribityllumazine synthase; [GO:0009349] riboflavin synthase complex; [KOG3243] 6,7-dimethyl-8-ribityllumazine synthase; [K00794] 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]; [2.5.1.78] 6,7-dimethyl-8-ribityllumazine synthase.; [PTHR21058:SF0] SUBFAMILY NOT NAMED 16.49 0.8039 18 Mapoly0060s0013 [6.3.4.14] Biotin carboxylase.; [GO:0005524] ATP binding; [GO:0016874] ligase activity; [PF02785] Biotin carboxylase C-terminal domain; [PF00289] Carbamoyl-phosphate synthase L chain, N-terminal domain; [6.4.1.2] Acetyl-CoA carboxylase.; [GO:0008152] metabolic process; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE; [GO:0003824] catalytic activity; [K01961] acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]; [PF02786] Carbamoyl-phosphate synthase L chain, ATP binding domain 16.52 0.7944 19 Mapoly0041s0099 [PTHR22976] BIOTIN SYNTHASE; [K01012] biotin synthetase [EC:2.8.1.6]; [PF06968] Biotin and Thiamin Synthesis associated domain; [PF04055] Radical SAM superfamily; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [2.8.1.6] Biotin synthase.; [KOG2900] Biotin synthase 20.17 0.7661 20 Mapoly0023s0178 [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0000166] nucleotide binding; [K01866] tyrosyl-tRNA synthetase [EC:6.1.1.1]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [6.1.1.1] Tyrosine--tRNA ligase.; [KOG2144] Tyrosyl-tRNA synthetase, cytoplasmic; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity 20.78 0.7892 21 Mapoly0001s0201 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [K02943] large subunit ribosomal protein LP2; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein 22.23 0.7957 22 Mapoly0174s0005 [3.4.11.1] Leucyl aminopeptidase.; [GO:0004177] aminopeptidase activity; [KOG2597] Predicted aminopeptidase of the M17 family; [PTHR11963:SF11] CYTOSOL AMINOPEPTIDASE; [GO:0005622] intracellular; [PTHR11963] LEUCINE AMINOPEPTIDASE-RELATED; [GO:0006508] proteolysis; [PF00883] Cytosol aminopeptidase family, catalytic domain; [PF02789] Cytosol aminopeptidase family, N-terminal domain; [K01255] leucyl aminopeptidase [EC:3.4.11.1] 22.36 0.7949 23 Mapoly0011s0194 [PF02897] Prolyl oligopeptidase, N-terminal beta-propeller domain; [GO:0008236] serine-type peptidase activity; [PTHR11757:SF3] OLIGOPEPTIDASE B (LYSYL AND ARGININYL OLIGOPEPTIDASE); [3.4.21.83] Oligopeptidase B.; [GO:0070008] serine-type exopeptidase activity; [K01354] oligopeptidase B [EC:3.4.21.83]; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis; [PTHR11757] PROTEASE FAMILY S9A OLIGOPEPTIDASE; [PF00326] Prolyl oligopeptidase family; [KOG2237] Predicted serine protease 22.74 0.7548 24 Mapoly0122s0019 [GO:0003723] RNA binding; [PTHR10631] N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE; [K00555] tRNA (guanine-N2-)-methyltransferase [EC:2.1.1.32]; [2.1.1.32] Transferred entry: 2.1.1.213, 2.1.1.214, 2.1.1.215 and 2.1.1.216.; [GO:0008033] tRNA processing; [PF02005] N2,N2-dimethylguanosine tRNA methyltransferase; [GO:0004809] tRNA (guanine-N2-)-methyltransferase activity 23.83 0.7304 25 Mapoly0084s0078 [PF01926] 50S ribosome-binding GTPase; [KOG1491] Predicted GTP-binding protein (ODN superfamily); [PF06071] Protein of unknown function (DUF933); [K06942] ribosomal RNA large subunit methyltransferase N [EC:2.1.1.-]; [PTHR23305] GTP-BINDING PROTEIN-RELATED; [GO:0005525] GTP binding 26.66 0.8202 26 Mapoly0029s0085 [PF00091] Tubulin/FtsZ family, GTPase domain; [PTHR30314] CELL DIVISION PROTEIN FTSZ-RELATED; [K03531] cell division protein FtsZ; [PF12327] FtsZ family, C-terminal domain 27.35 0.7774 27 Mapoly0045s0080 [GO:0004659] prenyltransferase activity; [GO:0016021] integral to membrane; [2.5.1.62] Chlorophyll synthase.; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family; [K04040] chlorophyll synthase [EC:2.5.1.62]; [KOG1381] Para-hydroxybenzoate-polyprenyl transferase 28.35 0.8074 28 Mapoly0001s0065 [GO:0019867] outer membrane; [PF07244] Surface antigen variable number repeat; [PF01103] Surface antigen; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN 29.70 0.7539 29 Mapoly0037s0052 [1.3.1.9] Enoyl-[acyl-carrier-protein] reductase (NADH).; [PTHR24322] FAMILY NOT NAMED; [PF13561] Enoyl-(Acyl carrier protein) reductase; [KOG0725] Reductases with broad range of substrate specificities; [K00208] enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] 31.02 0.7293 30 Mapoly0139s0003 [PF11523] Protein of unknown function (DUF3223) 31.98 0.7784 31 Mapoly0036s0041 [PF11833] Protein of unknown function (DUF3353) 32.62 0.8057 32 Mapoly0151s0030 [PF00557] Metallopeptidase family M24; [PTHR10804:SF11] PROLIFERATION-ASSOCIATED PROTEIN 2G4; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P); [KOG2776] Metallopeptidase 33.20 0.7829 33 Mapoly0002s0035 - 34.07 0.7852 34 Mapoly0015s0041 [PTHR26312] FAMILY NOT NAMED; [PF13414] TPR repeat 34.87 0.7799 35 Mapoly0066s0105 [3.1.3.11] Fructose-bisphosphatase.; [GO:0005975] carbohydrate metabolic process; [GO:0042132] fructose 1,6-bisphosphate 1-phosphatase activity; [PTHR11556] FRUCTOSE-1,6-BISPHOSPHATASE-RELATED; [GO:0042578] phosphoric ester hydrolase activity; [K03841] fructose-1,6-bisphosphatase I [EC:3.1.3.11]; [PF00316] Fructose-1-6-bisphosphatase; [KOG1458] Fructose-1,6-bisphosphatase 35.33 0.7250 36 Mapoly0132s0028 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [KOG1653] Single-stranded DNA-binding protein; [PF00436] Single-strand binding protein family; [K03111] single-strand DNA-binding protein 35.94 0.7654 37 Mapoly0001s0476 [K01714] dihydrodipicolinate synthase [EC:4.2.1.52]; [GO:0016829] lyase activity; [4.2.1.52] Transferred entry: 4.3.3.7.; [PTHR12128:SF15] DIHYDRODIPICOLINATE SYNTHASE; [GO:0008152] metabolic process; [PTHR12128] DIHYDRODIPICOLINATE SYNTHASE; [PF00701] Dihydrodipicolinate synthetase family 37.83 0.7483 38 Mapoly0040s0081 [K00648] 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]; [PF08545] 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; [2.3.1.180] Beta-ketoacyl-[acyl-carrier-protein] synthase III.; [GO:0004315] 3-oxoacyl-[acyl-carrier-protein] synthase activity; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [GO:0006633] fatty acid biosynthetic process; [GO:0008610] lipid biosynthetic process; [PF08541] 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 38.99 0.7638 39 Mapoly0003s0273 [PF02769] AIR synthase related protein, C-terminal domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [6.3.3.1] Phosphoribosylformylglycinamidine cyclo-ligase.; [K01933] phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]; [PF00586] AIR synthase related protein, N-terminal domain; [GO:0003824] catalytic activity; [PTHR10520:SF22] PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 40.25 0.7687 40 Mapoly0014s0153 [PTHR23091:SF4] N-TERMINAL ACETYLTRANSFERASE COMPLEX ARD1 SUBUNIT; [GO:0008080] N-acetyltransferase activity; [KOG3235] Subunit of the major N alpha-acetyltransferase; [K00670] peptide alpha-N-acetyltransferase [EC:2.3.1.88]; [PF00583] Acetyltransferase (GNAT) family; [2.3.1.88] Peptide alpha-N-acetyltransferase.; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE 41.57 0.7374 41 Mapoly0090s0010 [K04567] lysyl-tRNA synthetase, class II [EC:6.1.1.6]; [GO:0005524] ATP binding; [PTHR22594:SF4] LYSYL-TRNA SYNTHETASE; [6.1.1.6] Lysine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [KOG1885] Lysyl-tRNA synthetase (class II); [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N) 42.66 0.7740 42 Mapoly0031s0030 [PF02575] YbaB/EbfC DNA-binding family 43.05 0.7988 43 Mapoly0162s0018 [GO:0005840] ribosome; [PF00297] Ribosomal protein L3; [GO:0003735] structural constituent of ribosome; [PTHR11229] 50S RIBOSOMAL PROTEIN L3; [GO:0005622] intracellular; [KOG3141] Mitochondrial/chloroplast ribosomal protein L3; [GO:0006412] translation; [PTHR11229:SF0] SUBFAMILY NOT NAMED 43.69 0.7233 44 Mapoly0099s0038 [PF00564] PB1 domain; [GO:0005515] protein binding; [PTHR22904:SF22] GB DEF: HYPOTHETICAL PROTEIN; [PF13414] TPR repeat; [KOG4151] Myosin assembly protein/sexual cycle protein and related proteins; [PTHR22904] TPR REPEAT CONTAINING PROTEIN 43.82 0.7542 45 Mapoly0065s0065 [GO:0005840] ribosome; [PTHR11809] RIBOSOMAL PROTEIN L7/L12; [GO:0003735] structural constituent of ribosome; [KOG1715] Mitochondrial/chloroplast ribosomal protein L12; [GO:0005622] intracellular; [PF00542] Ribosomal protein L7/L12 C-terminal domain; [GO:0006412] translation 46.96 0.7397 46 Mapoly0009s0078 [K00645] [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]; [KOG2926] Malonyl-CoA:ACP transacylase; [2.3.1.39] [Acyl-carrier-protein] S-malonyltransferase.; [PTHR10982] MALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE; [PF00698] Acyl transferase domain 48.50 0.7590 47 Mapoly0043s0090 [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N) 49.51 0.7436 48 Mapoly0010s0075 - 50.73 0.6451 49 Mapoly0119s0032 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process 52.23 0.6424 50 Mapoly0010s0169 [PTHR31184] FAMILY NOT NAMED; [KOG3450] Huntingtin interacting protein HYPK 53.36 0.7302