Guide Gene

Gene ID
Mapoly0153s0030
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0016651] oxidoreductase activity, acting on NAD(P)H; [GO:0055114] oxidation-reduction process; [PF00384] Molybdopterin oxidoreductase; [1.6.99.3] NADH dehydrogenase.; [PF13510] 2Fe-2S iron-sulfur cluster binding domain; [KOG2282] NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit; [GO:0016491] oxidoreductase activity; [PTHR11615] NITRATE, FROMATE, IRON DEHYDROGENASE; [GO:0051536] iron-sulfur cluster binding; [PF09326] Domain of unknown function (DUF1982); [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [K03934] NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:1.6.5.3 1.6.99.3]; [PF10588] NADH-ubiquinone oxidoreductase-G iron-sulfur binding region

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0153s0030 [GO:0016651] oxidoreductase activity, acting on NAD(P)H; [GO:0055114] oxidation-reduction process; [PF00384] Molybdopterin oxidoreductase; [1.6.99.3] NADH dehydrogenase.; [PF13510] 2Fe-2S iron-sulfur cluster binding domain; [KOG2282] NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit; [GO:0016491] oxidoreductase activity; [PTHR11615] NITRATE, FROMATE, IRON DEHYDROGENASE; [GO:0051536] iron-sulfur cluster binding; [PF09326] Domain of unknown function (DUF1982); [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [K03934] NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:1.6.5.3 1.6.99.3]; [PF10588] NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 0.00 1.0000
1 Mapoly0052s0094 [PF01512] Respiratory-chain NADH dehydrogenase 51 Kd subunit; [GO:0016651] oxidoreductase activity, acting on NAD(P)H; [PF10589] NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; [GO:0055114] oxidation-reduction process; [PF10531] SLBB domain; [1.6.99.3] NADH dehydrogenase.; [GO:0051539] 4 iron, 4 sulfur cluster binding; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [KOG2658] NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit; [PTHR11780] NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 (NDUFV1); [K03942] NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:1.6.5.3 1.6.99.3]3.160.7441
2 Mapoly0006s0183 [PF03465] eRF1 domain 3; [KOG0688] Peptide chain release factor 1 (eRF1); [K03265] peptide chain release factor eRF subunit 1; [GO:0005737] cytoplasm; [PF03463] eRF1 domain 1; [PTHR10113] PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1; [PF03464] eRF1 domain 2; [GO:0006415] translational termination; [GO:0016149] translation release factor activity, codon specific3.870.7470
3 Mapoly0014s0127 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [2.3.1.61] Dihydrolipoyllysine-residue succinyltransferase.; [KOG0559] Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit); [PF00364] Biotin-requiring enzyme; [GO:0008152] metabolic process; [GO:0016746] transferase activity, transferring acyl groups; [PTHR23151:SF8] DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [K00658] 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]4.900.6960
4 Mapoly0009s0206 [3.4.24.64] Mitochondrial processing peptidase.; [KOG0960] Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily); [PTHR11851] METALLOPROTEASE; [K01412] mitochondrial processing peptidase [EC:3.4.24.64]; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16)5.480.7170
5 Mapoly0022s0120 [PTHR23323] VACUOLAR MEMBRANE PROTEIN RELATED; [PF00637] Region in Clathrin and VPS; [PF12451] Vacuolar protein sorting protein 11 C terminal; [GO:0016192] vesicle-mediated transport; [GO:0006886] intracellular protein transport; [PTHR23323:SF24] VACUOLAR MEMBRANE PROTEIN PEP5, 11; [KOG2114] Vacuolar assembly/sorting protein PEP5/VPS117.480.7013
6 Mapoly0045s0101 [KOG1396] Uncharacterized conserved protein; [PTHR12953] MEMBRANE PROTEIN CH1 RELATED; [PF07738] Sad1 / UNC-like C-terminal; [PTHR12953:SF1] MEMBRANE PROTEIN CH1 RELATED10.250.6539
7 Mapoly0029s0021 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE10.580.6881
8 Mapoly0088s0018 [GO:0008060] ARF GTPase activator activity; [PTHR23180:SF35] PREDICTED: SIMILAR TO G PROTEIN-COUPLED RECEPTOR KINASE INTERACTOR 1, PARTIAL; [KOG0704] ADP-ribosylation factor GTPase activator; [PTHR23180] CENTAURIN/ARF; [GO:0008270] zinc ion binding; [GO:0032312] regulation of ARF GTPase activity; [PF01412] Putative GTPase activating protein for Arf; [K12492] ADP-ribosylation factor GTPase-activating protein 113.420.6573
9 Mapoly0114s0007 [KOG0724] Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09522] DnaJ homolog subfamily C member 215.970.6977
10 Mapoly0003s0069 [PTHR32219] FAMILY NOT NAMED18.440.6496
11 Mapoly0052s0085 [K00036] glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]; [GO:0055114] oxidation-reduction process; [PF02781] Glucose-6-phosphate dehydrogenase, C-terminal domain; [PF00479] Glucose-6-phosphate dehydrogenase, NAD binding domain; [GO:0006006] glucose metabolic process; [1.1.1.49] Glucose-6-phosphate dehydrogenase.; [GO:0004345] glucose-6-phosphate dehydrogenase activity; [GO:0050661] NADP binding; [KOG0563] Glucose-6-phosphate 1-dehydrogenase; [PTHR23429] GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE (G6PD)19.050.6172
12 Mapoly0186s0018 [GO:0005506] iron ion binding; [KOG3052] Cytochrome c1; [PF02167] Cytochrome C1 family; [GO:0009055] electron carrier activity; [GO:0020037] heme binding; [PTHR10266] CYTOCHROME C1; [K00413] ubiquinol-cytochrome c reductase cytochrome c1 subunit [EC:1.10.2.2]; [1.10.2.2] Ubiquinol--cytochrome-c reductase.19.800.6544
13 Mapoly0146s0035 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF03141] Putative S-adenosyl-L-methionine-dependent methyltransferase21.170.6761
14 Mapoly0082s0043 [GO:0046034] ATP metabolic process; [GO:0005524] ATP binding; [3.6.3.14] H(+)-transporting two-sector ATPase.; [PF00006] ATP synthase alpha/beta family, nucleotide-binding domain; [GO:0015992] proton transport; [K02133] F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]; [KOG1350] F0F1-type ATP synthase, beta subunit; [GO:0033178] proton-transporting two-sector ATPase complex, catalytic domain; [GO:0015991] ATP hydrolysis coupled proton transport; [GO:0016820] hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; [PF02874] ATP synthase alpha/beta family, beta-barrel domain; [PTHR15184] ATP SYNTHASE; [PF00306] ATP synthase alpha/beta chain, C terminal domain24.040.6166
15 Mapoly0014s0063 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [2.3.1.12] Dihydrolipoyllysine-residue acetyltransferase.; [PF00364] Biotin-requiring enzyme; [KOG0557] Dihydrolipoamide acetyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [K00627] pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [PF02817] e3 binding domain; [PTHR23151:SF9] DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX24.080.6475
16 Mapoly0028s0022 [3.4.24.64] Mitochondrial processing peptidase.; [PTHR11851] METALLOPROTEASE; [K01412] mitochondrial processing peptidase [EC:3.4.24.64]; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [KOG2067] Mitochondrial processing peptidase, alpha subunit; [PTHR11851:SF49] MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT25.920.6327
17 Mapoly0004s0158 [GO:0033179] proton-transporting V-type ATPase, V0 domain; [3.6.3.14] H(+)-transporting two-sector ATPase.; [K02154] V-type H+-transporting ATPase subunit I [EC:3.6.3.14]; [PTHR11629] VACUOLAR PROTON ATPASES; [GO:0015078] hydrogen ion transmembrane transporter activity; [GO:0015991] ATP hydrolysis coupled proton transport; [PF01496] V-type ATPase 116kDa subunit family; [KOG2189] Vacuolar H+-ATPase V0 sector, subunit a28.160.6571
18 Mapoly0107s0040 [PF02219] Methylenetetrahydrofolate reductase; [K00297] methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]; [1.5.1.20] Methylenetetrahydrofolate reductase (NAD(P)H).; [KOG0564] 5,10-methylenetetrahydrofolate reductase; [GO:0055114] oxidation-reduction process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [PTHR21091:SF31] PREDICTED PROTEIN; [GO:0004489] methylenetetrahydrofolate reductase (NADPH) activity; [GO:0006555] methionine metabolic process28.720.6596
19 Mapoly0016s0186 [PF00676] Dehydrogenase E1 component; [GO:0055114] oxidation-reduction process; [GO:0006099] tricarboxylic acid cycle; [1.2.4.2] Oxoglutarate dehydrogenase (succinyl-transferring).; [GO:0030976] thiamine pyrophosphate binding; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [K00164] 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]; [GO:0004591] oxoglutarate dehydrogenase (succinyl-transferring) activity; [PTHR23152] 2-OXOGLUTARATE DEHYDROGENASE; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor; [KOG0450] 2-oxoglutarate dehydrogenase, E1 subunit31.750.6495
20 Mapoly0002s0320 [PF13620] Carboxypeptidase regulatory-like domain; [PTHR23303] CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING; [KOG1948] Metalloproteinase-related collagenase pM533.470.6604
21 Mapoly0026s0118 [GO:0016020] membrane; [PF00344] SecY translocase; [GO:0015031] protein transport; [KOG1373] Transport protein Sec61, alpha subunit; [K10956] protein transport protein SEC61 subunit alpha; [PF10559] Plug domain of Sec61p; [PTHR10906] SECY/SEC61-ALPHA FAMILY MEMBER34.470.5941
22 Mapoly0198s0012 [PTHR14009:SF1] LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN; [PTHR14009] LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN; [KOG1043] Ca2+-binding transmembrane protein LETM1/MRS7; [PF07766] LETM1-like protein37.470.6038
23 Mapoly0008s0155 [6.3.5.5] Carbamoyl-phosphate synthase (glutamine-hydrolyzing).; [PF00988] Carbamoyl-phosphate synthase small chain, CPSase domain; [PTHR11405] CARBAMOYLTRANSFERASE RELATED; [KOG0026] Anthranilate synthase, beta chain; [PF00117] Glutamine amidotransferase class-I; [K01956] carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]37.500.6494
24 Mapoly0029s0002 [GO:0005524] ATP binding; [PF02359] Cell division protein 48 (CDC48), N-terminal domain; [PF02933] Cell division protein 48 (CDC48), domain 2; [PF00004] ATPase family associated with various cellular activities (AAA); [K13525] transitional endoplasmic reticulum ATPase; [PTHR23077] AAA-FAMILY ATPASE; [KOG0730] AAA+-type ATPase37.510.6466
25 Mapoly0103s0007 [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [GO:0003924] GTPase activity; [K03267] G1 to S phase transition protein; [PTHR23115] TRANSLATION FACTOR; [PTHR23115:SF36] EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-BINDING SUBUNIT (ERF2) (TRANSLATION RELEASE FACTOR 3) (ERF3) (ERF-3); [KOG0459] Polypeptide release factor 3; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 237.710.6664
26 Mapoly0055s0072 [PTHR16254] POTASSIUM/PROTON ANTIPORTER-RELATED; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [KOG1650] Predicted K+/H+-antiporter; [GO:0055085] transmembrane transport; [GO:0006813] potassium ion transport; [PF02254] TrkA-N domain; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family37.830.6236
27 Mapoly0022s0125 [PTHR19876:SF2] COATOMER BETA SUBUNIT; [GO:0016192] vesicle-mediated transport; [KOG0276] Vesicle coat complex COPI, beta' subunit; [GO:0005515] protein binding; [PTHR19876] COATOMER; [PF04053] Coatomer WD associated region; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [GO:0005198] structural molecule activity; [PF00400] WD domain, G-beta repeat38.780.6522
28 Mapoly0042s0013 -41.570.6094
29 Mapoly1717s0001 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF01453] D-mannose binding lectin; [PF00332] Glycosyl hydrolases family 1741.990.6115
30 Mapoly0121s0043 [PF11145] Protein of unknown function (DUF2921)42.500.6116
31 Mapoly0246s0004 [GO:0055114] oxidation-reduction process; [PTHR31155] ACYL-(ACYL-CARRIER-PROTEIN) DESATURASE-RELATED; [GO:0006631] fatty acid metabolic process; [1.14.19.2] Acyl-[acyl-carrier-protein] desaturase.; [PF03405] Fatty acid desaturase; [K03921] acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2]; [GO:0045300] acyl-[acyl-carrier-protein] desaturase activity46.210.5975
32 Mapoly0014s0213 [KOG1991] Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily); [PF08506] Cse1; [PF03810] Importin-beta N-terminal domain; [GO:0005515] protein binding; [PF03378] CAS/CSE protein, C-terminus; [PTHR10997:SF18] IMPORTIN 7, 8 (IMP7, 8) (RAN-BINDING PROTEIN 7, 8); [GO:0006886] intracellular protein transport; [PTHR10997] IMPORTIN-7, 8, 11; [GO:0008536] Ran GTPase binding49.610.6367
33 Mapoly0002s0131 [PTHR19961] FIMBRIN/PLASTIN; [GO:0005515] protein binding; [PF00307] Calponin homology (CH) domain; [KOG0046] Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily51.500.6271
34 Mapoly0063s0029 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF05231] MASE1; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity51.720.5626
35 Mapoly0087s0079 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger)51.720.6297
36 Mapoly0089s0032 [PF04765] Protein of unknown function (DUF616); [PTHR12956] ALKALINE CERAMIDASE-RELATED52.230.6408
37 Mapoly0016s0067 [GO:0005524] ATP binding; [PTHR31187:SF0] SUBFAMILY NOT NAMED; [GO:0005471] ATP:ADP antiporter activity; [K03301] ATP:ADP antiporter, AAA family; [GO:0016021] integral to membrane; [PTHR31187] FAMILY NOT NAMED; [GO:0006810] transport; [PF03219] TLC ATP/ADP transporter55.440.6037
38 Mapoly0005s0083 [PF01602] Adaptin N terminal region; [GO:0016192] vesicle-mediated transport; [GO:0030126] COPI vesicle coat; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [KOG1078] Vesicle coat complex COPI, gamma subunit; [PF08752] Coatomer gamma subunit appendage platform subdomain; [GO:0005198] structural molecule activity; [PTHR10261] COATOMER SUBUNIT GAMMA58.150.6142
39 Mapoly0004s0190 [GO:0019867] outer membrane; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN; [PF07244] Surface antigen variable number repeat; [KOG2602] Predicted cell surface protein homologous to bacterial outer membrane proteins; [PF01103] Surface antigen58.170.6158
40 Mapoly0028s0042 [GO:0005515] protein binding; [PF13414] TPR repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PTHR22904:SF145] PROTEIN DIA2; [PF00515] Tetratricopeptide repeat; [PF12796] Ankyrin repeats (3 copies); [PTHR22904] TPR REPEAT CONTAINING PROTEIN60.000.6073
41 Mapoly0023s0054 -62.450.5978
42 Mapoly0185s0020 [PF05450] Nicastrin; [PTHR31826] FAMILY NOT NAMED; [GO:0016485] protein processing; [GO:0016021] integral to membrane; [KOG2526] Predicted aminopeptidases - M20/M25/M40 family62.930.5893
43 Mapoly0005s0185 [PTHR10811] FRINGE-RELATED; [KOG2246] Galactosyltransferases; [PF04646] Protein of unknown function, DUF60465.400.5749
44 Mapoly0007s0067 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [K07874] Ras-related protein Rab-1A; [PTHR24073] FAMILY NOT NAMED; [PF00071] Ras family; [KOG0084] GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins; [GO:0005525] GTP binding65.450.5058
45 Mapoly0078s0049 -67.530.5733
46 Mapoly0181s0003 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE67.530.6012
47 Mapoly0014s0172 -67.650.6195
48 Mapoly0011s0112 [GO:0046034] ATP metabolic process; [GO:0005524] ATP binding; [3.6.3.14] H(+)-transporting two-sector ATPase.; [K02145] V-type H+-transporting ATPase subunit A [EC:3.6.3.14]; [PF00006] ATP synthase alpha/beta family, nucleotide-binding domain; [GO:0015992] proton transport; [PTHR15184:SF7] V-TYPE ATP SYNTHASE ALPHA CHAIN; [KOG1352] Vacuolar H+-ATPase V1 sector, subunit A; [GO:0015991] ATP hydrolysis coupled proton transport; [GO:0033178] proton-transporting two-sector ATPase complex, catalytic domain; [GO:0016820] hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; [PF02874] ATP synthase alpha/beta family, beta-barrel domain; [PTHR15184] ATP SYNTHASE; [PF00306] ATP synthase alpha/beta chain, C terminal domain70.420.6222
49 Mapoly0059s0098 -74.400.6109
50 Mapoly0074s0004 [PTHR10652] ADENYLYL CYCLASE-ASSOCIATED PROTEIN; [PF01213] Adenylate cyclase associated (CAP) N terminal; [KOG2675] Adenylate cyclase-associated protein (CAP/Srv2p); [PF08603] Adenylate cyclase associated (CAP) C terminal; [GO:0003779] actin binding; [GO:0007010] cytoskeleton organization74.460.6111
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