Guide Gene

Gene ID
Mapoly0122s0031
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG2691] RNA polymerase II subunit 9; [PTHR11239] DNA-DIRECTED RNA POLYMERASE

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0122s0031 [KOG2691] RNA polymerase II subunit 9; [PTHR11239] DNA-DIRECTED RNA POLYMERASE 0.00 1.0000
1 Mapoly0128s0021 [PTHR10457] MEVALONATE KINASE/GALACTOKINASE; [GO:0005524] ATP binding; [KOG0631] Galactokinase; [PF10509] Galactokinase galactose-binding signature; [PF08544] GHMP kinases C terminal; [PF00288] GHMP kinases N terminal domain; [2.7.1.6] Galactokinase.; [K00849] galactokinase [EC:2.7.1.6]2.000.6388
2 Mapoly0002s0030 -3.000.6207
3 Mapoly0046s0004 [KOG2361] Predicted methyltransferase; [PF08242] Methyltransferase domain; [PF10294] Putative methyltransferase; [PTHR22809] METHYLTRANSFERASE-RELATED3.460.6097
4 Mapoly0002s0121 [PTHR15681:SF1] SUBFAMILY NOT NAMED; [PTHR15681] FAMILY NOT NAMED8.000.5916
5 Mapoly0001s0155 [GO:0003677] DNA binding; [PTHR10133] DNA POLYMERASE I; [PF01367] 5'-3' exonuclease, C-terminal SAM fold; [PTHR10133:SF22] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [PF02739] 5'-3' exonuclease, N-terminal resolvase-like domain9.000.6548
6 Mapoly0012s0044 [PF13371] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [KOG0548] Molecular co-chaperone STI1; [PF13181] Tetratricopeptide repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR26.610.5590
7 Mapoly0036s0015 [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [PF00646] F-box domain38.080.4290
8 Mapoly0005s0290 [GO:0008168] methyltransferase activity; [PF05063] MT-A70; [PTHR14475] DROSOPHILA MELANOGASTER BITHORAX COMPLEX (BX-C)-RELATED; [GO:0006139] nucleobase-containing compound metabolic process; [PTHR14475:SF2] SUBFAMILY NOT NAMED39.570.5716
9 Mapoly0060s0114 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE42.100.6174
10 Mapoly0028s0050 [PTHR13421] FAMILY NOT NAMED; [PF12251] snRNA-activating protein of 50kDa MW C terminal; [KOG2664] Small nuclear RNA activating protein complex - 50kD subunit (SNAP50)43.930.6123
11 Mapoly0095s0027 [GO:0003913] DNA photolyase activity; [KOG0133] Deoxyribodipyrimidine photolyase/cryptochrome; [PTHR11455] CRYPTOCHROME; [PF00875] DNA photolyase; [PF03441] FAD binding domain of DNA photolyase; [GO:0006281] DNA repair; [K02295] cryptochrome43.950.5412
12 Mapoly0033s0012 [GO:0005524] ATP binding; [2.5.1.75] tRNA dimethylallyltransferase.; [PTHR11088] TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED; [K00791] tRNA dimethylallyltransferase [EC:2.5.1.75]; [GO:0008033] tRNA processing; [PF01715] IPP transferase45.480.5632
13 Mapoly0147s0011 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family46.990.4524
14 Mapoly0044s0080 [KOG2855] Ribokinase; [PF00294] pfkB family carbohydrate kinase; [PTHR10584] SUGAR KINASE47.480.6071
15 Mapoly0001s0380 [K06962] ribosomal RNA assembly protein; [PF05991] YacP-like NYN domain48.730.5278
16 Mapoly0060s0072 [PTHR12553] RIBONUCLEASE Z; [PF12706] Beta-lactamase superfamily domain54.990.5086
17 Mapoly0090s0002 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR31241] FAMILY NOT NAMED56.190.4655
18 Mapoly0048s0109 [KOG3662] Cell division control protein/predicted DNA repair exonuclease; [PTHR13315] METALLO PHOSPHOESTERASE RELATED; [PTHR13315:SF0] SUBFAMILY NOT NAMED62.550.5189
19 Mapoly0042s0025 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR22835] ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process63.500.4569
20 Mapoly0009s0102 [PTHR11567] ACID PHOSPHATASE-RELATED; [K13121] protein FRA10AC1; [PTHR11567:SF25] FRA10AC1 PROTEIN; [KOG1297] Uncharacterized conserved protein; [PF09725] Folate-sensitive fragile site protein Fra10Ac167.190.5354
21 Mapoly0013s0135 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [PF13837] Myb/SANT-like DNA-binding domain72.020.5422
22 Mapoly0003s0149 -79.650.4776
23 Mapoly0164s0016 [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold83.070.5157
24 Mapoly0175s0022 [KOG1361] Predicted hydrolase involved in interstrand cross-link repair; [PTHR23240] DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED; [PF12706] Beta-lactamase superfamily domain; [PF07522] DNA repair metallo-beta-lactamase83.580.4857
25 Mapoly0090s0008 [GO:0003677] DNA binding; [PTHR12780:SF0] SUBFAMILY NOT NAMED; [K03025] DNA-directed RNA polymerase III subunit RPC6; [PF05158] RNA polymerase Rpc34 subunit; [GO:0006351] transcription, DNA-dependent; [PTHR12780] RNA POLYMERASE III (DNA DIRECTED), 39KD SUBUNIT-RELATED; [KOG3233] RNA polymerase III, subunit C34; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase.87.690.5638
26 Mapoly0072s0043 -89.700.5289
27 Mapoly0015s0100 [K09537] DnaJ homolog subfamily C member 17; [KOG0691] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [GO:0003676] nucleic acid binding; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)94.020.5346
28 Mapoly0057s0028 [K09659] dolichyl-phosphate mannosyltransferase polypeptide 3; [PF08285] Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); [PTHR16433] FAMILY NOT NAMED; [PTHR16433:SF0] SUBFAMILY NOT NAMED; [KOG4841] Dolichol-phosphate mannosyltransferase, subunit 394.660.4722
29 Mapoly0009s0186 [KOG1315] Predicted DHHC-type Zn-finger protein; [GO:0008270] zinc ion binding; [PF01529] DHHC palmitoyltransferase; [PTHR22883] ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN95.580.4753
30 Mapoly0046s0035 -104.670.5210
31 Mapoly0024s0098 [PF00472] RF-1 domain; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [GO:0006415] translational termination; [KOG3429] Predicted peptidyl-tRNA hydrolase; [GO:0003747] translation release factor activity113.180.5087
32 Mapoly0028s0040 [PF01702] Queuine tRNA-ribosyltransferase; [2.4.2.29] tRNA-guanine(34) transglycosylase.; [GO:0008479] queuine tRNA-ribosyltransferase activity; [PTHR11962] QUEUINE TRNA-RIBOSYLTRANSFERASE; [GO:0008616] queuosine biosynthetic process; [K00773] queuine tRNA-ribosyltransferase [EC:2.4.2.29]; [KOG3908] Queuine-tRNA ribosyltransferase; [GO:0006400] tRNA modification113.220.5087
33 Mapoly0040s0072 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain115.760.5278
34 Mapoly0143s0035 [PF03372] Endonuclease/Exonuclease/phosphatase family; [KOG2338] Transcriptional effector CCR4-related protein; [PTHR12121] CARBON CATABOLITE REPRESSOR PROTEIN 4121.920.5350
35 Mapoly0009s0242 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR22835] ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process122.650.4329
36 Mapoly0042s0040 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED122.770.4906
37 Mapoly0011s0155 -124.270.5183
38 Mapoly0085s0033 [GO:0008168] methyltransferase activity; [K06970] ribosomal RNA large subunit methyltransferase F [EC:2.1.1.181]; [2.1.1.181] 23S rRNA (adenine(1618)-N(6))-methyltransferase.; [PF05971] Protein of unknown function (DUF890); [PTHR13393:SF0] SUBFAMILY NOT NAMED; [PTHR13393] SAM-DEPENDENT METHYLTRANSFERASE128.780.5150
39 Mapoly0012s0182 -133.080.4940
40 Mapoly0124s0018 [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity136.800.4494
41 Mapoly0034s0013 [PF12631] Catalytic cysteine-containing C-terminus of GTPase, MnmE; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA)136.940.5118
42 Mapoly0003s0211 [GO:0008168] methyltransferase activity; [PF03492] SAM dependent carboxyl methyltransferase; [PTHR31009] S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN137.400.4006
43 Mapoly0072s0108 [PTHR21227] TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2; [K01170] tRNA-intron endonuclease [EC:3.1.27.9]; [3.1.27.9] tRNA-intron endonuclease.; [KOG4685] tRNA splicing endonuclease SEN2; [PF01974] tRNA intron endonuclease, catalytic C-terminal domain; [GO:0006388] tRNA splicing, via endonucleolytic cleavage and ligation; [GO:0000213] tRNA-intron endonuclease activity; [PF02778] tRNA intron endonuclease, N-terminal domain; [PTHR21227:SF0] SUBFAMILY NOT NAMED142.130.4689
44 Mapoly0009s0140 [K13950] para-aminobenzoate synthetase [EC:2.6.1.85]; [2.6.1.85] Aminodeoxychorismate synthase.; [PF04715] Anthranilate synthase component I, N terminal region; [GO:0009058] biosynthetic process; [PF00425] chorismate binding enzyme; [KOG1224] Para-aminobenzoate (PABA) synthase ABZ1; [GO:0016833] oxo-acid-lyase activity; [PTHR11236] AMINOBENZOATE/ANTHRANILATE SYNTHASE; [PF00117] Glutamine amidotransferase class-I143.310.4241
45 Mapoly0049s0078 [KOG4317] Predicted Zn-finger protein; [PTHR15555] ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 (PROTEIN FON)-RELATED; [PTHR15555:SF0] SUBFAMILY NOT NAMED; [PF04438] HIT zinc finger144.190.4029
46 Mapoly0124s0016 [GO:0006869] lipid transport; [GO:0005319] lipid transporter activity; [PTHR13117] ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED; [GO:0016021] integral to membrane; [K06316] oligosaccharidyl-lipid flippase family; [PF04506] Rft protein; [KOG2864] Nuclear division RFT1 protein144.260.4964
47 Mapoly0197s0015 -146.410.4490
48 Mapoly0076s0049 [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3048] Molecular chaperone Prefoldin, subunit 5; [GO:0006457] protein folding; [PTHR15111] RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN (NNX3); [PTHR15111:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding152.030.5161
49 Mapoly0047s0093 [PTHR11079] CYTOSINE DEAMINASE; [GO:0016787] hydrolase activity; [PF00383] Cytidine and deoxycytidylate deaminase zinc-binding region; [GO:0008270] zinc ion binding; [KOG1018] Cytosine deaminase FCY1 and related enzymes157.780.5168
50 Mapoly0002s0321 [PF10250] GDP-fucose protein O-fucosyltransferase; [PTHR31933] FAMILY NOT NAMED159.090.4303
Showing 1 to 50 of 200 records
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