Guide Gene
- Gene ID
- Mapoly0001s0155
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0003677] DNA binding; [PTHR10133] DNA POLYMERASE I; [PF01367] 5'-3' exonuclease, C-terminal SAM fold; [PTHR10133:SF22] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [PF02739] 5'-3' exonuclease, N-terminal resolvase-like domain
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0001s0155 [GO:0003677] DNA binding; [PTHR10133] DNA POLYMERASE I; [PF01367] 5'-3' exonuclease, C-terminal SAM fold; [PTHR10133:SF22] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [PF02739] 5'-3' exonuclease, N-terminal resolvase-like domain 0.00 1.0000 1 Mapoly0009s0123 [KOG1803] DNA helicase; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [GO:0003676] nucleic acid binding; [PF13087] AAA domain; [PF01424] R3H domain 3.16 0.7464 2 Mapoly0156s0013 [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [KOG2067] Mitochondrial processing peptidase, alpha subunit 3.61 0.7275 3 Mapoly0044s0080 [KOG2855] Ribokinase; [PF00294] pfkB family carbohydrate kinase; [PTHR10584] SUGAR KINASE 4.69 0.7710 4 Mapoly0191s0005 [2.3.1.179] Beta-ketoacyl-[acyl-carrier-protein] synthase II.; [PTHR11712] POLYKETIDE SYNTHASE-RELATED; [PF00109] Beta-ketoacyl synthase, N-terminal domain; [K09458] 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]; [PF02801] Beta-ketoacyl synthase, C-terminal domain; [KOG1394] 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) 4.69 0.7863 5 Mapoly0051s0025 [PF00505] HMG (high mobility group) box 5.10 0.6974 6 Mapoly0112s0009 [PF13513] HEAT-like repeat; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING 6.48 0.7592 7 Mapoly0060s0072 [PTHR12553] RIBONUCLEASE Z; [PF12706] Beta-lactamase superfamily domain 8.89 0.6556 8 Mapoly0122s0031 [KOG2691] RNA polymerase II subunit 9; [PTHR11239] DNA-DIRECTED RNA POLYMERASE 9.00 0.6548 9 Mapoly0164s0016 [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold 9.17 0.6819 10 Mapoly0034s0013 [PF12631] Catalytic cysteine-containing C-terminus of GTPase, MnmE; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA) 10.68 0.7457 11 Mapoly0028s0040 [PF01702] Queuine tRNA-ribosyltransferase; [2.4.2.29] tRNA-guanine(34) transglycosylase.; [GO:0008479] queuine tRNA-ribosyltransferase activity; [PTHR11962] QUEUINE TRNA-RIBOSYLTRANSFERASE; [GO:0008616] queuosine biosynthetic process; [K00773] queuine tRNA-ribosyltransferase [EC:2.4.2.29]; [KOG3908] Queuine-tRNA ribosyltransferase; [GO:0006400] tRNA modification 13.86 0.7010 12 Mapoly0138s0045 [PF04751] Protein of unknown function (DUF615) 15.10 0.7542 13 Mapoly0056s0124 [GO:0008168] methyltransferase activity; [K00783] hypothetical protein; [GO:0005737] cytoplasm; [GO:0006364] rRNA processing; [PF02590] Predicted SPOUT methyltransferase 19.08 0.6492 14 Mapoly0072s0043 - 23.24 0.6872 15 Mapoly0024s0098 [PF00472] RF-1 domain; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [GO:0006415] translational termination; [KOG3429] Predicted peptidyl-tRNA hydrolase; [GO:0003747] translation release factor activity 25.92 0.6951 16 Mapoly0102s0034 [GO:0008168] methyltransferase activity; [PTHR14741] S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED; [2.1.1.-] Methyltransferases.; [GO:0009452] 7-methylguanosine RNA capping; [KOG2730] Methylase; [K14292] trimethylguanosine synthase [EC:2.1.1.-]; [PF09445] RNA cap guanine-N2 methyltransferase; [GO:0001510] RNA methylation 30.72 0.7418 17 Mapoly0014s0040 [PF03465] eRF1 domain 3; [KOG2869] Meiotic cell division protein Pelota/DOM34; [PF03463] eRF1 domain 1; [GO:0070481] nuclear-transcribed mRNA catabolic process, non-stop decay; [GO:0070966] nuclear-transcribed mRNA catabolic process, no-go decay; [PF03464] eRF1 domain 2; [GO:0071025] RNA surveillance; [PTHR10853] PELOTA; [K06965] protein pelota 34.64 0.6592 18 Mapoly0049s0044 [PTHR18838:SF16] UNCHARACTERIZED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase; [PTHR18838] RHODANESE-LIKE DOMAIN-CONTAINING 35.07 0.7328 19 Mapoly0001s0402 [PF09991] Predicted membrane protein (DUF2232) 36.95 0.7030 20 Mapoly0128s0021 [PTHR10457] MEVALONATE KINASE/GALACTOKINASE; [GO:0005524] ATP binding; [KOG0631] Galactokinase; [PF10509] Galactokinase galactose-binding signature; [PF08544] GHMP kinases C terminal; [PF00288] GHMP kinases N terminal domain; [2.7.1.6] Galactokinase.; [K00849] galactokinase [EC:2.7.1.6] 38.60 0.6227 21 Mapoly0001s0141 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED 39.65 0.7309 22 Mapoly0149s0015 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE; [KOG0730] AAA+-type ATPase 40.21 0.7439 23 Mapoly0161s0009 [GO:0003723] RNA binding; [PTHR13452] THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; [PF02926] THUMP domain 41.57 0.7385 24 Mapoly0008s0154 [KOG0379] Kelch repeat-containing proteins; [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN 42.05 0.6890 25 Mapoly0015s0032 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN 43.15 0.6866 26 Mapoly0118s0043 - 45.78 0.7183 27 Mapoly0006s0185 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED 47.02 0.7316 28 Mapoly0092s0023 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PF01479] S4 domain 49.90 0.6140 29 Mapoly0012s0182 - 50.00 0.6325 30 Mapoly0090s0008 [GO:0003677] DNA binding; [PTHR12780:SF0] SUBFAMILY NOT NAMED; [K03025] DNA-directed RNA polymerase III subunit RPC6; [PF05158] RNA polymerase Rpc34 subunit; [GO:0006351] transcription, DNA-dependent; [PTHR12780] RNA POLYMERASE III (DNA DIRECTED), 39KD SUBUNIT-RELATED; [KOG3233] RNA polymerase III, subunit C34; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase. 53.03 0.7165 31 Mapoly0143s0035 [PF03372] Endonuclease/Exonuclease/phosphatase family; [KOG2338] Transcriptional effector CCR4-related protein; [PTHR12121] CARBON CATABOLITE REPRESSOR PROTEIN 4 53.40 0.7018 32 Mapoly0060s0002 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin 53.44 0.5874 33 Mapoly0047s0093 [PTHR11079] CYTOSINE DEAMINASE; [GO:0016787] hydrolase activity; [PF00383] Cytidine and deoxycytidylate deaminase zinc-binding region; [GO:0008270] zinc ion binding; [KOG1018] Cytosine deaminase FCY1 and related enzymes 56.75 0.7129 34 Mapoly0002s0246 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase 59.88 0.7018 35 Mapoly0016s0042 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG4393] Predicted pseudouridylate synthase; [PTHR11142:SF1] PSEUDOURIDYLATE SYNTHASE-RELATED; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase. 61.14 0.7239 36 Mapoly0034s0125 [PF08243] SPT2 chromatin protein; [PTHR22691] YEAST SPT2-RELATED 62.16 0.6792 37 Mapoly0102s0014 [KOG2857] Predicted MYND Zn-finger protein/hormone receptor interactor; [PTHR13241] THYROID RECEPTOR INTERACTING PROTEIN 3; [PF04438] HIT zinc finger 64.14 0.7182 38 Mapoly0072s0110 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [GO:0016491] oxidoreductase activity; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES 65.92 0.6426 39 Mapoly0011s0155 - 66.33 0.6696 40 Mapoly0031s0117 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 67.12 0.6526 41 Mapoly0002s0030 - 68.30 0.5672 42 Mapoly0179s0013 [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF00561] alpha/beta hydrolase fold 70.10 0.5182 43 Mapoly0099s0058 - 71.94 0.7193 44 Mapoly0002s0128 [GO:0016020] membrane; [PF00344] SecY translocase; [GO:0015031] protein transport; [PTHR10906] SECY/SEC61-ALPHA FAMILY MEMBER 73.97 0.7167 45 Mapoly0046s0081 [GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 74.68 0.6898 46 Mapoly0086s0027 [GO:0005524] ATP binding; [KOG0671] LAMMER dual specificity kinases; [2.7.12.1] Dual-specificity kinase.; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24058] DUAL SPECIFICITY PROTEIN KINASE; [GO:0006468] protein phosphorylation; [K08287] dual-specificity kinase [EC:2.7.12.1] 75.10 0.6785 47 Mapoly0046s0035 - 80.68 0.6429 48 Mapoly0076s0049 [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3048] Molecular chaperone Prefoldin, subunit 5; [GO:0006457] protein folding; [PTHR15111] RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN (NNX3); [PTHR15111:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding 88.86 0.6540 49 Mapoly0165s0023 [GO:0034227] tRNA thio-modification; [PF10288] Protein of unknown function (DUF2392); [GO:0002098] tRNA wobble uridine modification; [KOG2594] Uncharacterized conserved protein; [K14169] cytoplasmic tRNA 2-thiolation protein 2; [GO:0000049] tRNA binding; [PTHR20882] FAMILY NOT NAMED 90.35 0.6735 50 Mapoly0001s0165 - 91.04 0.6965