Guide Gene
- Gene ID
- Mapoly0024s0098
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF00472] RF-1 domain; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [GO:0006415] translational termination; [KOG3429] Predicted peptidyl-tRNA hydrolase; [GO:0003747] translation release factor activity
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0024s0098 [PF00472] RF-1 domain; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [GO:0006415] translational termination; [KOG3429] Predicted peptidyl-tRNA hydrolase; [GO:0003747] translation release factor activity 0.00 1.0000 1 Mapoly0317s0001 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain 3.16 0.7166 2 Mapoly0047s0017 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0766] Predicted mitochondrial carrier protein; [PTHR24089:SF107] PUTATIVE MITOCHONDRIAL CARRIER PROTEIN LOC494141 4.36 0.8069 3 Mapoly0034s0013 [PF12631] Catalytic cysteine-containing C-terminus of GTPase, MnmE; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA) 5.10 0.7556 4 Mapoly0001s0402 [PF09991] Predicted membrane protein (DUF2232) 10.00 0.7425 5 Mapoly0114s0040 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 10.10 0.7408 6 Mapoly0072s0110 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [GO:0016491] oxidoreductase activity; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES 11.49 0.6963 7 Mapoly0070s0076 [PF11805] Protein of unknown function (DUF3326) 11.66 0.7461 8 Mapoly0092s0023 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PF01479] S4 domain 12.65 0.6658 9 Mapoly0034s0014 [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA); [K03650] tRNA modification GTPase; [PF10396] GTP-binding protein TrmE N-terminus; [GO:0005525] GTP binding 12.96 0.7377 10 Mapoly0152s0023 - 13.75 0.7462 11 Mapoly0124s0018 [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity 18.97 0.6292 12 Mapoly0101s0005 [K01883] cysteinyl-tRNA synthetase [EC:6.1.1.16]; [PTHR10890] CYSTEINYL-TRNA SYNTHETASE; [PF01406] tRNA synthetases class I (C) catalytic domain; [6.1.1.16] Cysteine--tRNA ligase.; [KOG2007] Cysteinyl-tRNA synthetase 21.35 0.7188 13 Mapoly0015s0007 - 21.63 0.7175 14 Mapoly0045s0147 [PF03151] Triose-phosphate Transporter family; [PTHR11132] SOLUTE CARRIER FAMILY 35; [KOG1444] Nucleotide-sugar transporter VRG4/SQV-7; [PTHR11132:SF23] SOLUTE CARRIER FAMILY 35 MEMBER C2 22.58 0.6689 15 Mapoly0128s0021 [PTHR10457] MEVALONATE KINASE/GALACTOKINASE; [GO:0005524] ATP binding; [KOG0631] Galactokinase; [PF10509] Galactokinase galactose-binding signature; [PF08544] GHMP kinases C terminal; [PF00288] GHMP kinases N terminal domain; [2.7.1.6] Galactokinase.; [K00849] galactokinase [EC:2.7.1.6] 22.58 0.6306 16 Mapoly0043s0066 [PF01963] TraB family; [PTHR21530:SF1] gb def: Hypothetical protein At2g32340; [KOG2860] Uncharacterized conserved protein, contains TraB domain; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN 23.24 0.6964 17 Mapoly0029s0043 - 23.69 0.7153 18 Mapoly0001s0155 [GO:0003677] DNA binding; [PTHR10133] DNA POLYMERASE I; [PF01367] 5'-3' exonuclease, C-terminal SAM fold; [PTHR10133:SF22] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [PF02739] 5'-3' exonuclease, N-terminal resolvase-like domain 25.92 0.6951 19 Mapoly0051s0108 [PF11152] Protein of unknown function (DUF2930) 26.40 0.7031 20 Mapoly0059s0019 - 29.39 0.7118 21 Mapoly0075s0082 - 32.31 0.6298 22 Mapoly0156s0013 [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [KOG2067] Mitochondrial processing peptidase, alpha subunit 34.42 0.6326 23 Mapoly0202s0015 - 35.10 0.6340 24 Mapoly0102s0005 [PF06962] Putative rRNA methylase 36.06 0.6940 25 Mapoly0075s0055 - 36.52 0.6844 26 Mapoly0003s0145 [PF02527] rRNA small subunit methyltransferase G; [2.1.-.-] Transferring one-carbon groups.; [GO:0005737] cytoplasm; [K03501] ribosomal RNA small subunit methyltransferase G [EC:2.1.1.170]; [PTHR31760] FAMILY NOT NAMED; [GO:0006364] rRNA processing; [GO:0008649] rRNA methyltransferase activity 36.66 0.6709 27 Mapoly0007s0246 [PTHR14911] FAMILY NOT NAMED; [PF01170] Putative RNA methylase family UPF0020 39.57 0.7020 28 Mapoly0123s0028 [PTHR23327:SF3] gb def: SPBC14F5.10c protein; [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis 43.57 0.7108 29 Mapoly0033s0149 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED 43.71 0.6674 30 Mapoly0023s0120 [PF07884] Vitamin K epoxide reductase family 44.27 0.7100 31 Mapoly0006s0263 [PF04969] CS domain; [PF01202] Shikimate kinase; [PTHR21087] SHIKIMATE KINASE; [PTHR21087:SF3] gb def: Shikimate kinase 44.50 0.7093 32 Mapoly0159s0002 - 45.08 0.7048 33 Mapoly0006s0155 [GO:0003723] RNA binding; [PTHR11078] N UTILIZATION SUBSTANCE PROTEIN B-RELATED; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [GO:0006353] DNA-dependent transcription, termination 45.52 0.6914 34 Mapoly0007s0151 [PF05768] Glutaredoxin-like domain (DUF836) 47.18 0.6522 35 Mapoly0065s0016 [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 48.10 0.6293 36 Mapoly0061s0014 [GO:0006807] nitrogen compound metabolic process; [KOG0807] Carbon-nitrogen hydrolase; [PF00795] Carbon-nitrogen hydrolase; [PTHR23088] NITRILASE-RELATED; [GO:0016810] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 50.75 0.6132 37 Mapoly0042s0040 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED 51.85 0.6252 38 Mapoly0097s0055 [PF00448] SRP54-type protein, GTPase domain; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03110] fused signal recognition particle receptor; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS 52.45 0.6964 39 Mapoly0094s0013 - 53.39 0.6941 40 Mapoly0023s0121 [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding 54.44 0.6675 41 Mapoly0108s0061 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [PTHR24282] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P450 56.12 0.6387 42 Mapoly0007s0120 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family 56.28 0.5938 43 Mapoly0007s0139 [PF13369] Transglutaminase-like superfamily 57.05 0.5902 44 Mapoly0002s0246 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase 57.33 0.7000 45 Mapoly0009s0023 [PF04483] Protein of unknown function (DUF565) 57.60 0.6636 46 Mapoly0056s0004 - 57.97 0.6757 47 Mapoly0001s0380 [K06962] ribosomal RNA assembly protein; [PF05991] YacP-like NYN domain 59.03 0.6006 48 Mapoly0070s0021 [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 60.47 0.6956 49 Mapoly0081s0053 [PF04452] RNA methyltransferase; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR30027] RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E; [K09761] ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-]; [GO:0006364] rRNA processing 60.99 0.6715 50 Mapoly0052s0014 - 64.25 0.6601