Guide Gene

Gene ID
Mapoly0024s0098
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF00472] RF-1 domain; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [GO:0006415] translational termination; [KOG3429] Predicted peptidyl-tRNA hydrolase; [GO:0003747] translation release factor activity

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0024s0098 [PF00472] RF-1 domain; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [GO:0006415] translational termination; [KOG3429] Predicted peptidyl-tRNA hydrolase; [GO:0003747] translation release factor activity 0.00 1.0000
1 Mapoly0317s0001 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain3.160.7166
2 Mapoly0047s0017 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0766] Predicted mitochondrial carrier protein; [PTHR24089:SF107] PUTATIVE MITOCHONDRIAL CARRIER PROTEIN LOC4941414.360.8069
3 Mapoly0034s0013 [PF12631] Catalytic cysteine-containing C-terminus of GTPase, MnmE; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA)5.100.7556
4 Mapoly0001s0402 [PF09991] Predicted membrane protein (DUF2232)10.000.7425
5 Mapoly0114s0040 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family10.100.7408
6 Mapoly0072s0110 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [GO:0016491] oxidoreductase activity; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES11.490.6963
7 Mapoly0070s0076 [PF11805] Protein of unknown function (DUF3326)11.660.7461
8 Mapoly0092s0023 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PF01479] S4 domain12.650.6658
9 Mapoly0034s0014 [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA); [K03650] tRNA modification GTPase; [PF10396] GTP-binding protein TrmE N-terminus; [GO:0005525] GTP binding12.960.7377
10 Mapoly0152s0023 -13.750.7462
11 Mapoly0124s0018 [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity18.970.6292
12 Mapoly0101s0005 [K01883] cysteinyl-tRNA synthetase [EC:6.1.1.16]; [PTHR10890] CYSTEINYL-TRNA SYNTHETASE; [PF01406] tRNA synthetases class I (C) catalytic domain; [6.1.1.16] Cysteine--tRNA ligase.; [KOG2007] Cysteinyl-tRNA synthetase21.350.7188
13 Mapoly0015s0007 -21.630.7175
14 Mapoly0045s0147 [PF03151] Triose-phosphate Transporter family; [PTHR11132] SOLUTE CARRIER FAMILY 35; [KOG1444] Nucleotide-sugar transporter VRG4/SQV-7; [PTHR11132:SF23] SOLUTE CARRIER FAMILY 35 MEMBER C222.580.6689
15 Mapoly0128s0021 [PTHR10457] MEVALONATE KINASE/GALACTOKINASE; [GO:0005524] ATP binding; [KOG0631] Galactokinase; [PF10509] Galactokinase galactose-binding signature; [PF08544] GHMP kinases C terminal; [PF00288] GHMP kinases N terminal domain; [2.7.1.6] Galactokinase.; [K00849] galactokinase [EC:2.7.1.6]22.580.6306
16 Mapoly0043s0066 [PF01963] TraB family; [PTHR21530:SF1] gb def: Hypothetical protein At2g32340; [KOG2860] Uncharacterized conserved protein, contains TraB domain; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN23.240.6964
17 Mapoly0029s0043 -23.690.7153
18 Mapoly0001s0155 [GO:0003677] DNA binding; [PTHR10133] DNA POLYMERASE I; [PF01367] 5'-3' exonuclease, C-terminal SAM fold; [PTHR10133:SF22] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [PF02739] 5'-3' exonuclease, N-terminal resolvase-like domain25.920.6951
19 Mapoly0051s0108 [PF11152] Protein of unknown function (DUF2930)26.400.7031
20 Mapoly0059s0019 -29.390.7118
21 Mapoly0075s0082 -32.310.6298
22 Mapoly0156s0013 [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [KOG2067] Mitochondrial processing peptidase, alpha subunit34.420.6326
23 Mapoly0202s0015 -35.100.6340
24 Mapoly0102s0005 [PF06962] Putative rRNA methylase36.060.6940
25 Mapoly0075s0055 -36.520.6844
26 Mapoly0003s0145 [PF02527] rRNA small subunit methyltransferase G; [2.1.-.-] Transferring one-carbon groups.; [GO:0005737] cytoplasm; [K03501] ribosomal RNA small subunit methyltransferase G [EC:2.1.1.170]; [PTHR31760] FAMILY NOT NAMED; [GO:0006364] rRNA processing; [GO:0008649] rRNA methyltransferase activity36.660.6709
27 Mapoly0007s0246 [PTHR14911] FAMILY NOT NAMED; [PF01170] Putative RNA methylase family UPF002039.570.7020
28 Mapoly0123s0028 [PTHR23327:SF3] gb def: SPBC14F5.10c protein; [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis43.570.7108
29 Mapoly0033s0149 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED43.710.6674
30 Mapoly0023s0120 [PF07884] Vitamin K epoxide reductase family44.270.7100
31 Mapoly0006s0263 [PF04969] CS domain; [PF01202] Shikimate kinase; [PTHR21087] SHIKIMATE KINASE; [PTHR21087:SF3] gb def: Shikimate kinase44.500.7093
32 Mapoly0159s0002 -45.080.7048
33 Mapoly0006s0155 [GO:0003723] RNA binding; [PTHR11078] N UTILIZATION SUBSTANCE PROTEIN B-RELATED; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [GO:0006353] DNA-dependent transcription, termination45.520.6914
34 Mapoly0007s0151 [PF05768] Glutaredoxin-like domain (DUF836)47.180.6522
35 Mapoly0065s0016 [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN48.100.6293
36 Mapoly0061s0014 [GO:0006807] nitrogen compound metabolic process; [KOG0807] Carbon-nitrogen hydrolase; [PF00795] Carbon-nitrogen hydrolase; [PTHR23088] NITRILASE-RELATED; [GO:0016810] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds50.750.6132
37 Mapoly0042s0040 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED51.850.6252
38 Mapoly0097s0055 [PF00448] SRP54-type protein, GTPase domain; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03110] fused signal recognition particle receptor; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS52.450.6964
39 Mapoly0094s0013 -53.390.6941
40 Mapoly0023s0121 [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding54.440.6675
41 Mapoly0108s0061 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [PTHR24282] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P45056.120.6387
42 Mapoly0007s0120 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family56.280.5938
43 Mapoly0007s0139 [PF13369] Transglutaminase-like superfamily57.050.5902
44 Mapoly0002s0246 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase57.330.7000
45 Mapoly0009s0023 [PF04483] Protein of unknown function (DUF565)57.600.6636
46 Mapoly0056s0004 -57.970.6757
47 Mapoly0001s0380 [K06962] ribosomal RNA assembly protein; [PF05991] YacP-like NYN domain59.030.6006
48 Mapoly0070s0021 [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN60.470.6956
49 Mapoly0081s0053 [PF04452] RNA methyltransferase; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR30027] RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E; [K09761] ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-]; [GO:0006364] rRNA processing60.990.6715
50 Mapoly0052s0014 -64.250.6601
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