Guide Gene
- Gene ID
- Mapoly0003s0145
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF02527] rRNA small subunit methyltransferase G; [2.1.-.-] Transferring one-carbon groups.; [GO:0005737] cytoplasm; [K03501] ribosomal RNA small subunit methyltransferase G [EC:2.1.1.170]; [PTHR31760] FAMILY NOT NAMED; [GO:0006364] rRNA processing; [GO:0008649] rRNA methyltransferase activity
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0003s0145 [PF02527] rRNA small subunit methyltransferase G; [2.1.-.-] Transferring one-carbon groups.; [GO:0005737] cytoplasm; [K03501] ribosomal RNA small subunit methyltransferase G [EC:2.1.1.170]; [PTHR31760] FAMILY NOT NAMED; [GO:0006364] rRNA processing; [GO:0008649] rRNA methyltransferase activity 0.00 1.0000 1 Mapoly0002s0246 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase 5.29 0.7804 2 Mapoly0081s0053 [PF04452] RNA methyltransferase; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR30027] RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E; [K09761] ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-]; [GO:0006364] rRNA processing 7.55 0.7407 3 Mapoly0066s0058 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0330] ATP-dependent RNA helicase 9.49 0.7495 4 Mapoly0093s0042 [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [KOG2683] Sirtuin 4 and related class II sirtuins (SIR2 family) 11.49 0.7087 5 Mapoly0032s0012 [PTHR11808] TRANS-SULFURATION ENZYME FAMILY MEMBER; [GO:0030170] pyridoxal phosphate binding; [PF06838] Methionine gamma-lyase; [PTHR11808:SF41] CYSTATHIONINE GAMMA-LYASE-RELATED 13.42 0.7280 6 Mapoly0078s0004 [2.3.1.181] Lipoyl(octanoyl) transferase.; [PTHR10993] OCTANOYLTRANSFERASE; [K03801] lipoyl(octanoyl) transferase [EC:2.3.1.181]; [KOG0325] Lipoyltransferase; [GO:0006464] cellular protein modification process; [PF03099] Biotin/lipoate A/B protein ligase family 13.49 0.7079 7 Mapoly0059s0019 - 14.07 0.7372 8 Mapoly0055s0075 [PF01276] Orn/Lys/Arg decarboxylase, major domain; [PF03711] Orn/Lys/Arg decarboxylase, C-terminal domain; [GO:0003824] catalytic activity; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED 17.86 0.6849 9 Mapoly0111s0046 [PF00581] Rhodanese-like domain; [PTHR18838:SF17] UNCHARACTERIZED; [PTHR18838] RHODANESE-LIKE DOMAIN-CONTAINING 18.57 0.7393 10 Mapoly0044s0034 [PF01259] SAICAR synthetase; [KOG2835] Phosphoribosylamidoimidazole-succinocarboxamide synthase; [K01923] phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]; [6.3.2.6] Phosphoribosylaminoimidazolesuccinocarboxamide synthase.; [PTHR11609] PURINE BIOSYNTHESIS PROTEIN 6/7, PUR6/7; [PTHR11609:SF1] PURINE BIOSYNTHESIS PROTEIN 7, PUR7 19.29 0.7396 11 Mapoly0043s0066 [PF01963] TraB family; [PTHR21530:SF1] gb def: Hypothetical protein At2g32340; [KOG2860] Uncharacterized conserved protein, contains TraB domain; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN 19.77 0.7013 12 Mapoly0070s0021 [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 22.61 0.7344 13 Mapoly0028s0125 [PF07719] Tetratricopeptide repeat; [PTHR12197:SF13] SET AND MYND DOMAIN CONTAINING; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00856] SET domain; [PTHR12197] SET AND MYND DOMAIN CONTAINING 24.82 0.6439 14 Mapoly0034s0014 [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA); [K03650] tRNA modification GTPase; [PF10396] GTP-binding protein TrmE N-terminus; [GO:0005525] GTP binding 24.82 0.7075 15 Mapoly0006s0155 [GO:0003723] RNA binding; [PTHR11078] N UTILIZATION SUBSTANCE PROTEIN B-RELATED; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [GO:0006353] DNA-dependent transcription, termination 31.50 0.7033 16 Mapoly0034s0013 [PF12631] Catalytic cysteine-containing C-terminus of GTPase, MnmE; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA) 32.31 0.6996 17 Mapoly0066s0092 [K03127] transcription initiation factor TFIID subunit 13; [KOG3901] Transcription initiation factor IID subunit; [PF02269] Transcription initiation factor IID, 18kD subunit; [GO:0006366] transcription from RNA polymerase II promoter; [PTHR11380] TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED 32.50 0.6948 18 Mapoly0053s0018 - 34.35 0.6987 19 Mapoly0072s0110 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [GO:0016491] oxidoreductase activity; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES 34.90 0.6597 20 Mapoly0012s0025 [PF01453] D-mannose binding lectin 36.66 0.6966 21 Mapoly0024s0098 [PF00472] RF-1 domain; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [GO:0006415] translational termination; [KOG3429] Predicted peptidyl-tRNA hydrolase; [GO:0003747] translation release factor activity 36.66 0.6709 22 Mapoly0047s0093 [PTHR11079] CYTOSINE DEAMINASE; [GO:0016787] hydrolase activity; [PF00383] Cytidine and deoxycytidylate deaminase zinc-binding region; [GO:0008270] zinc ion binding; [KOG1018] Cytosine deaminase FCY1 and related enzymes 37.42 0.7212 23 Mapoly0023s0152 [PTHR21392:SF0] SUBFAMILY NOT NAMED; [PTHR21392] UNCHARACTERIZED; [KOG4382] Uncharacterized conserved protein, contains DTW domain; [PF03942] DTW domain 37.95 0.6847 24 Mapoly0106s0015 [PTHR12561] LIPOATE-PROTEIN LIGASE; [GO:0006464] cellular protein modification process; [PF03099] Biotin/lipoate A/B protein ligase family 38.17 0.6845 25 Mapoly0118s0031 [PTHR13068:SF8] gb def: riken cdna 2410017i18 [mus musculus]; [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED 42.28 0.7084 26 Mapoly0008s0196 [KOG2505] Ankyrin repeat protein; [GO:0005515] protein binding; [PTHR16036:SF2] SUBFAMILY NOT NAMED; [PF13606] Ankyrin repeat; [PTHR16036] FAMILY NOT NAMED 45.25 0.7308 27 Mapoly0088s0019 [PTHR21392:SF2] gb def: Hypothetical protein At2g41750 (At2g41750/T11A7.15); [PTHR21392] UNCHARACTERIZED; [PF03942] DTW domain 46.22 0.6928 28 Mapoly0029s0044 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED 47.50 0.6669 29 Mapoly0173s0025 [PF12452] Protein of unknown function (DUF3685) 49.36 0.6854 30 Mapoly0007s0165 - 50.16 0.6524 31 Mapoly0088s0068 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity; [KOG0838] RNA Methylase, SpoU family 50.79 0.6262 32 Mapoly0046s0081 [GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 52.31 0.6992 33 Mapoly0113s0007 [GO:0005524] ATP binding; [KOG2355] Predicted ABC-type transport, ATPase component/CCR4 associated factor; [PTHR24220] FAMILY NOT NAMED; [GO:0016887] ATPase activity; [PF00005] ABC transporter 54.11 0.6069 34 Mapoly0103s0024 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [PTHR14614:SF6] UNCHARACTERIZED 66.55 0.6706 35 Mapoly0102s0005 [PF06962] Putative rRNA methylase 68.83 0.6671 36 Mapoly0019s0020 [KOG3928] Mitochondrial ribosome small subunit component, mediator of apoptosis DAP3; [PTHR12810] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29; [PTHR12810:SF0] SUBFAMILY NOT NAMED; [PF10236] Mitochondrial ribosomal death-associated protein 3 69.00 0.6933 37 Mapoly0005s0190 [PF06969] HemN C-terminal domain; [PF04055] Radical SAM superfamily; [1.3.99.22] Coproporphyrinogen dehydrogenase.; [PTHR13932] COPROPORPHYRINIGEN III OXIDASE; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [K02495] oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] 71.00 0.6541 38 Mapoly0066s0060 [GO:0005515] protein binding; [GO:0005730] nucleolus; [KOG0310] Conserved WD40 repeat-containing protein; [PF09384] UTP15 C terminal; [GO:0006364] rRNA processing; [K14549] U3 small nucleolar RNA-associated protein 15; [PTHR19924] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat 71.41 0.7047 39 Mapoly0065s0016 [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 71.73 0.6183 40 Mapoly0094s0071 [GO:0016020] membrane; [KOG1563] Mitochondrial protein Surfeit 1/SURF1/SHY1, required for expression of cytochrome oxidase; [PTHR23427:SF2] SURFEIT LOCUS PROTEIN 1; [PTHR23427] SURFEIT LOCUS PROTEIN; [PF02104] SURF1 family 72.11 0.6919 41 Mapoly0158s0008 [PTHR24322] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR24322:SF57] SUBFAMILY NOT NAMED; [PF00106] short chain dehydrogenase; [KOG1611] Predicted short chain-type dehydrogenase 73.08 0.6083 42 Mapoly0014s0200 [GO:0003723] RNA binding; [GO:0003743] translation initiation factor activity; [PF01176] Translation initiation factor 1A / IF-1; [PTHR21641] TRANSLATION INITIATION FACTOR-RELATED; [GO:0006413] translational initiation; [KOG2925] Predicted translation initiation factor related to eIF-1A 75.13 0.6551 43 Mapoly0008s0047 [PF10604] Polyketide cyclase / dehydrase and lipid transport 75.26 0.5911 44 Mapoly0122s0043 [PF02810] SEC-C motif 82.05 0.6834 45 Mapoly0034s0065 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED 82.87 0.6392 46 Mapoly0084s0006 [PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [GO:0009396] folic acid-containing compound biosynthetic process; [PTHR11136] FOLYLPOLYGLUTAMATE SYNTHASE-RELATED; [GO:0009058] biosynthetic process; [6.3.2.17] Tetrahydrofolate synthase.; [KOG2525] Folylpolyglutamate synthase; [K01930] folylpolyglutamate synthase [EC:6.3.2.17]; [GO:0004326] tetrahydrofolylpolyglutamate synthase activity; [PTHR11136:SF0] SUBFAMILY NOT NAMED 84.30 0.5680 47 Mapoly0004s0255 [KOG4411] Phytoene/squalene synthetase; [PTHR21181] FAMILY NOT NAMED; [GO:0009058] biosynthetic process; [GO:0016740] transferase activity; [PF00494] Squalene/phytoene synthase 86.22 0.6577 48 Mapoly0020s0164 - 87.46 0.6166 49 Mapoly0116s0021 - 88.46 0.6443 50 Mapoly0071s0019 [PTHR12176] UNCHARACTERIZED; [PF13847] Methyltransferase domain; [KOG1271] Methyltransferases 89.58 0.6830