Guide Gene

Gene ID
Mapoly0009s0123
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG1803] DNA helicase; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [GO:0003676] nucleic acid binding; [PF13087] AAA domain; [PF01424] R3H domain

Coexpressed Gene List

Search : Show :

Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0009s0123 [KOG1803] DNA helicase; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [GO:0003676] nucleic acid binding; [PF13087] AAA domain; [PF01424] R3H domain 0.00 1.0000
1 Mapoly0001s0155 [GO:0003677] DNA binding; [PTHR10133] DNA POLYMERASE I; [PF01367] 5'-3' exonuclease, C-terminal SAM fold; [PTHR10133:SF22] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [PF02739] 5'-3' exonuclease, N-terminal resolvase-like domain3.160.7464
2 Mapoly0156s0013 [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [KOG2067] Mitochondrial processing peptidase, alpha subunit3.870.7123
3 Mapoly0112s0009 [PF13513] HEAT-like repeat; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING4.360.7501
4 Mapoly0001s0261 [PF02383] SacI homology domain; [PTHR11200] INOSITOL 5-PHOSPHATASE; [KOG1888] Putative phosphoinositide phosphatase; [GO:0042578] phosphoric ester hydrolase activity13.230.6669
5 Mapoly0054s0112 [PTHR13620] 3-5 EXONUCLEASE; [PF00035] Double-stranded RNA binding motif; [GO:0008408] 3'-5' exonuclease activity; [PTHR13620:SF2] gb def: cg6744 gene product [drosophila melanogaster]; [PF01612] 3'-5' exonuclease; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [KOG2207] Predicted 3'-5' exonuclease14.280.7286
6 Mapoly0015s0032 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN16.160.7034
7 Mapoly0058s0023 [PF04842] Plant protein of unknown function (DUF639); [PTHR31860] FAMILY NOT NAMED16.970.6926
8 Mapoly0191s0005 [2.3.1.179] Beta-ketoacyl-[acyl-carrier-protein] synthase II.; [PTHR11712] POLYKETIDE SYNTHASE-RELATED; [PF00109] Beta-ketoacyl synthase, N-terminal domain; [K09458] 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]; [PF02801] Beta-ketoacyl synthase, C-terminal domain; [KOG1394] 3-oxoacyl-(acyl-carrier-protein) synthase (I and II)24.980.7125
9 Mapoly0126s0029 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR11514] MYC26.830.5987
10 Mapoly0046s0099 [GO:0005524] ATP binding; [PF02889] Sec63 Brl domain; [PTHR11752] HELICASE SKI2W; [PTHR11752:SF8] ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3, HELC1; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0952] DNA/RNA helicase MER3/SLH1, DEAD-box superfamily; [GO:0003676] nucleic acid binding; [K01529] dynamin GTPase [EC:3.6.5.5]; [3.6.1.-] In phosphorous-containing anhydrides.30.510.7073
11 Mapoly0008s0154 [KOG0379] Kelch repeat-containing proteins; [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN31.750.6837
12 Mapoly0027s0145 [PF01902] ATP-binding region; [KOG2316] Predicted ATPase (PP-loop superfamily); [PTHR12196] DOMAIN OF UNKNOWN FUNCTION 71 (DUF71)-CONTAINING PROTEIN; [PF01042] Endoribonuclease L-PSP35.070.7087
13 Mapoly0007s0030 [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [PF02138] Beige/BEACH domain; [KOG0272] U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats); [PF14844] PH domain associated with Beige/BEACH; [PF00400] WD domain, G-beta repeat38.110.6489
14 Mapoly0102s0034 [GO:0008168] methyltransferase activity; [PTHR14741] S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED; [2.1.1.-] Methyltransferases.; [GO:0009452] 7-methylguanosine RNA capping; [KOG2730] Methylase; [K14292] trimethylguanosine synthase [EC:2.1.1.-]; [PF09445] RNA cap guanine-N2 methyltransferase; [GO:0001510] RNA methylation42.610.7054
15 Mapoly0141s0032 [GO:0003723] RNA binding; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED48.370.6880
16 Mapoly0128s0032 [3.5.1.98] Histone deacetylase.; [KOG1342] Histone deacetylase complex, catalytic component RPD3; [K06067] histone deacetylase 1/2 [EC:3.5.1.98]; [PF00850] Histone deacetylase domain; [PTHR10625] HISTONE DEACETYLASE50.000.6756
17 Mapoly0085s0081 [K12127] pseudo-response regulator 1; [PF00072] Response regulator receiver domain; [PF06203] CCT motif; [GO:0000160] phosphorelay signal transduction system; [GO:0005515] protein binding; [PTHR26402] RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM51.590.6731
18 Mapoly0049s0044 [PTHR18838:SF16] UNCHARACTERIZED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase; [PTHR18838] RHODANESE-LIKE DOMAIN-CONTAINING53.110.6926
19 Mapoly0148s0001 [PF03364] Polyketide cyclase / dehydrase and lipid transport53.920.6778
20 Mapoly0090s0080 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family61.070.7019
21 Mapoly0030s0035 [PTHR10919] FAMILY NOT NAMED; [PF01803] LIM-domain binding protein; [KOG4057] Uncharacterized conserved protein61.600.6900
22 Mapoly0025s0135 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PTHR10436:SF53] SUBFAMILY NOT NAMED65.330.6981
23 Mapoly0020s0127 [GO:0005515] protein binding; [PTHR14344] WD REPEAT PROTEIN; [KOG0974] WD-repeat protein WDR6, WD repeat superfamily; [PF00400] WD domain, G-beta repeat72.560.6619
24 Mapoly0044s0080 [KOG2855] Ribokinase; [PF00294] pfkB family carbohydrate kinase; [PTHR10584] SUGAR KINASE77.730.6530
25 Mapoly0100s0030 -77.790.6838
26 Mapoly0118s0043 -78.800.6726
27 Mapoly0006s0089 [PF04640] PLATZ transcription factor; [PTHR31065] FAMILY NOT NAMED81.100.6649
28 Mapoly0016s0098 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF00170] bZIP transcription factor81.780.6853
29 Mapoly0104s0040 -91.550.6582
30 Mapoly0102s0046 [PF01585] G-patch domain; [PTHR13948] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding93.980.6693
31 Mapoly0001s0385 [PTHR31636] FAMILY NOT NAMED; [PF03514] GRAS domain family99.920.6333
32 Mapoly0146s0009 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE100.220.6600
33 Mapoly0560s0001 [PF07714] Protein tyrosine kinase; [PF08263] Leucine rich repeat N-terminal domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE105.360.6562
34 Mapoly0022s0145 [PF09423] PhoD-like phosphatase107.500.5952
35 Mapoly0019s0078 [KOG2388] UDP-N-acetylglucosamine pyrophosphorylase; [PF05239] PRC-barrel domain; [GO:0070569] uridylyltransferase activity; [GO:0008152] metabolic process; [PF01782] RimM N-terminal domain; [PTHR11952:SF2] UDP-N-ACTEYLGLUCOSAMINE PYROPHOSPHORYLASE 1; [PF01704] UTP--glucose-1-phosphate uridylyltransferase; [GO:0006364] rRNA processing; [PTHR11952] UDP- GLUCOSE PYROPHOSPHORYLASE111.150.6619
36 Mapoly0087s0031 [GO:0016791] phosphatase activity; [PTHR10807] MYOTUBULARIN-RELATED; [GO:0016311] dephosphorylation; [KOG4471] Phosphatidylinositol 3-phosphate 3-phosphatase myotubularin MTM1; [PF06602] Myotubularin-like phosphatase domain111.250.5119
37 Mapoly0164s0016 [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold111.750.5746
38 Mapoly0031s0113 [PTHR20854] INOSITOL MONOPHOSPHATASE; [GO:0046854] phosphatidylinositol phosphorylation; [3.1.3.7] 3'(2'),5'-bisphosphate nucleotidase.; [KOG1528] Salt-sensitive 3'-phosphoadenosine-5'-phosphatase HAL2/SAL1; [PF00459] Inositol monophosphatase family; [K01082] 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]111.780.6573
39 Mapoly0015s0143 [PF12204] Domain of unknown function (DUF3598)112.740.6519
40 Mapoly0082s0059 -116.380.6734
41 Mapoly0060s0002 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin118.640.5430
42 Mapoly0083s0085 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain123.250.5856
43 Mapoly0072s0042 [PF12937] F-box-like; [GO:0005515] protein binding124.130.6267
44 Mapoly0034s0014 [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA); [K03650] tRNA modification GTPase; [PF10396] GTP-binding protein TrmE N-terminus; [GO:0005525] GTP binding124.520.6300
45 Mapoly0025s0052 [PTHR12984] SCY1-RELATED S/T PROTEIN KINASE-LIKE; [GO:0005524] ATP binding; [PTHR12984:SF3] SCY1(YEAST) PROTEIN KINASE-LIKE; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [KOG4693] Uncharacterized conserved protein, contains kelch repeat; [PF01344] Kelch motif; [GO:0006468] protein phosphorylation; [PF00646] F-box domain124.880.6619
46 Mapoly0092s0023 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PF01479] S4 domain126.180.5528
47 Mapoly0028s0040 [PF01702] Queuine tRNA-ribosyltransferase; [2.4.2.29] tRNA-guanine(34) transglycosylase.; [GO:0008479] queuine tRNA-ribosyltransferase activity; [PTHR11962] QUEUINE TRNA-RIBOSYLTRANSFERASE; [GO:0008616] queuosine biosynthetic process; [K00773] queuine tRNA-ribosyltransferase [EC:2.4.2.29]; [KOG3908] Queuine-tRNA ribosyltransferase; [GO:0006400] tRNA modification131.470.5867
48 Mapoly0105s0051 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR133.040.5866
49 Mapoly0064s0016 [GO:0003723] RNA binding; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED134.100.6599
50 Mapoly0001s0533 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED135.940.6608
Showing 1 to 50 of 200 records
S