Guide Gene

Gene ID
Mapoly0012s0044
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13371] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [KOG0548] Molecular co-chaperone STI1; [PF13181] Tetratricopeptide repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0012s0044 [PF13371] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [KOG0548] Molecular co-chaperone STI1; [PF13181] Tetratricopeptide repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 0.00 1.0000
1 Mapoly0147s0031 [PTHR11062] EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED; [KOG1021] Acetylglucosaminyltransferase EXT1/exostosin 1; [PF03016] Exostosin family1.410.6736
2 Mapoly0102s0031 -4.800.6056
3 Mapoly0065s0092 [PTHR24012] FAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)8.660.6283
4 Mapoly0008s0248 [KOG0265] U5 snRNP-specific protein-like factor and related proteins; [GO:0005515] protein binding; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat13.670.6303
5 Mapoly0040s0072 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain14.070.6646
6 Mapoly0060s0114 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE15.430.6758
7 Mapoly0051s0062 [PTHR31301] FAMILY NOT NAMED; [PF03195] Protein of unknown function DUF26017.750.5689
8 Mapoly0040s0027 -17.830.5357
9 Mapoly0005s0290 [GO:0008168] methyltransferase activity; [PF05063] MT-A70; [PTHR14475] DROSOPHILA MELANOGASTER BITHORAX COMPLEX (BX-C)-RELATED; [GO:0006139] nucleobase-containing compound metabolic process; [PTHR14475:SF2] SUBFAMILY NOT NAMED18.110.6396
10 Mapoly0122s0031 [KOG2691] RNA polymerase II subunit 9; [PTHR11239] DNA-DIRECTED RNA POLYMERASE26.610.5590
11 Mapoly0112s0009 [PF13513] HEAT-like repeat; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING31.620.6499
12 Mapoly0044s0080 [KOG2855] Ribokinase; [PF00294] pfkB family carbohydrate kinase; [PTHR10584] SUGAR KINASE33.230.6440
13 Mapoly0002s0121 [PTHR15681:SF1] SUBFAMILY NOT NAMED; [PTHR15681] FAMILY NOT NAMED36.330.5694
14 Mapoly0012s0182 -39.820.5991
15 Mapoly0023s0082 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family40.120.6371
16 Mapoly0102s0034 [GO:0008168] methyltransferase activity; [PTHR14741] S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED; [2.1.1.-] Methyltransferases.; [GO:0009452] 7-methylguanosine RNA capping; [KOG2730] Methylase; [K14292] trimethylguanosine synthase [EC:2.1.1.-]; [PF09445] RNA cap guanine-N2 methyltransferase; [GO:0001510] RNA methylation40.890.6536
17 Mapoly0033s0012 [GO:0005524] ATP binding; [2.5.1.75] tRNA dimethylallyltransferase.; [PTHR11088] TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED; [K00791] tRNA dimethylallyltransferase [EC:2.5.1.75]; [GO:0008033] tRNA processing; [PF01715] IPP transferase42.430.6034
18 Mapoly0076s0049 [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3048] Molecular chaperone Prefoldin, subunit 5; [GO:0006457] protein folding; [PTHR15111] RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN (NNX3); [PTHR15111:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding52.610.6276
19 Mapoly0025s0013 [GO:0010468] regulation of gene expression; [GO:0005777] peroxisome; [PTHR14379] LIMKAIN B (LKAP); [PF01936] NYN domain; [PF12872] OST-HTH/LOTUS domain52.980.6425
20 Mapoly0118s0042 [PTHR15454:SF7] SUBFAMILY NOT NAMED; [PTHR15454] NISCHARIN RELATED54.770.6023
21 Mapoly0165s0023 [GO:0034227] tRNA thio-modification; [PF10288] Protein of unknown function (DUF2392); [GO:0002098] tRNA wobble uridine modification; [KOG2594] Uncharacterized conserved protein; [K14169] cytoplasmic tRNA 2-thiolation protein 2; [GO:0000049] tRNA binding; [PTHR20882] FAMILY NOT NAMED59.300.6298
22 Mapoly0019s0002 [PTHR12176] UNCHARACTERIZED; [KOG2352] Predicted spermine/spermidine synthase60.990.5417
23 Mapoly0056s0124 [GO:0008168] methyltransferase activity; [K00783] hypothetical protein; [GO:0005737] cytoplasm; [GO:0006364] rRNA processing; [PF02590] Predicted SPOUT methyltransferase63.260.5530
24 Mapoly0105s0048 [PF03417] Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase66.720.6295
25 Mapoly0010s0074 -68.540.6143
26 Mapoly0046s0035 -68.990.5980
27 Mapoly0055s0041 -70.430.4964
28 Mapoly0005s0241 [PF05097] Protein of unknown function (DUF688)71.620.5028
29 Mapoly0031s0082 [PTHR12302] EBNA2 BINDING PROTEIN P100; [PF00565] Staphylococcal nuclease homologue; [KOG2039] Transcriptional coactivator p100; [PF00567] Tudor domain; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0003676] nucleic acid binding71.730.5363
30 Mapoly0076s0093 [PTHR15668] JM1 PROTEIN; [PF05667] Protein of unknown function (DUF812)73.610.6393
31 Mapoly0097s0060 [PTHR13890:SF2] MITOCHONDRIAL RNA SPLICING PROTEIN MRS2-RELATED; [KOG2662] Magnesium transporters: CorA family; [GO:0015095] magnesium ion transmembrane transporter activity; [GO:0015693] magnesium ion transport; [PTHR13890] RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL75.890.5978
32 Mapoly0087s0022 [PTHR32133] FAMILY NOT NAMED; [PF12937] F-box-like; [GO:0005515] protein binding76.160.5372
33 Mapoly0060s0072 [PTHR12553] RIBONUCLEASE Z; [PF12706] Beta-lactamase superfamily domain79.650.5304
34 Mapoly0068s0044 [GO:0016787] hydrolase activity; [KOG1592] Asparaginase; [PTHR10188:SF8] THREONINE ASPARTASE 1; [PTHR10188] L-ASPARAGINASE; [PF01112] Asparaginase81.120.6118
35 Mapoly0164s0016 [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold88.250.5551
36 Mapoly0058s0089 -90.390.5412
37 Mapoly0022s0148 [PTHR23245] UNCHARACTERIZED; [PTHR23245:SF25] METHIONINE 10+ HOMOLOG; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity; [KOG2078] tRNA modification enzyme; [K07055] TatD-related deoxyribonuclease95.990.5379
38 Mapoly0056s0054 [GO:0006506] GPI anchor biosynthetic process; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K03857] phosphatidylinositol glycan, class A [EC:2.4.1.198]; [PTHR12526] GLYCOSYLTRANSFERASE; [KOG1111] N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase; [2.4.1.198] Phosphatidylinositol N-acetylglucosaminyltransferase.; [PF08288] PIGA (GPI anchor biosynthesis)98.080.6296
39 Mapoly0207s0005 [KOG0987] DNA helicase PIF1/RRM3; [PF05970] PIF1-like helicase; [GO:0006281] DNA repair; [PTHR23274] DNA HELICASE-RELATED; [GO:0003678] DNA helicase activity; [GO:0000723] telomere maintenance98.260.5255
40 Mapoly0033s0026 [K11799] WD repeat-containing protein 21A; [GO:0005515] protein binding; [PTHR19845] KATANIN P80 SUBUNIT; [PF00400] WD domain, G-beta repeat105.920.6214
41 Mapoly0560s0001 [PF07714] Protein tyrosine kinase; [PF08263] Leucine rich repeat N-terminal domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE106.490.6099
42 Mapoly0003s0144 [GO:0006355] regulation of transcription, DNA-dependent; [PF02671] Paired amphipathic helix repeat; [PTHR12346] SIN3B-RELATED; [PF08295] Sin3 family co-repressor; [GO:0005634] nucleus108.790.6087
43 Mapoly0020s0122 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [PTHR13847:SF35] SARCOSINE DEHYDROGENASE, MITOCHONDRIAL PRECURSOR (SARDH)(EC 1.5.99.1)(BPR-2) SO; [GO:0016491] oxidoreductase activity; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG2665] Predicted FAD-dependent oxidoreductase109.220.5522
44 Mapoly0022s0105 [PF00867] XPG I-region; [PF00752] XPG N-terminal domain; [GO:0006281] DNA repair; [KOG2519] 5'-3' exonuclease; [GO:0004518] nuclease activity; [PTHR11081] XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY111.640.6124
45 Mapoly0027s0118 [KOG2273] Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins; [PTHR10555] SORTING NEXIN; [PF00787] PX domain; [PF09325] Vps5 C terminal like; [GO:0035091] phosphatidylinositol binding112.490.5316
46 Mapoly0169s0010 [GO:0016020] membrane; [GO:0030001] metal ion transport; [PTHR11040] ZINC/IRON TRANSPORTER; [PF02535] ZIP Zinc transporter; [KOG1558] Fe2+/Zn2+ regulated transporter; [GO:0046873] metal ion transmembrane transporter activity; [GO:0055085] transmembrane transport116.880.4281
47 Mapoly0004s0165 [3.6.3.6] Proton-exporting ATPase.; [K01535] H+-transporting ATPase [EC:3.6.3.6]; [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0205] Plasma membrane H+-transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase120.500.3760
48 Mapoly0036s0084 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG0387] Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); [PF00271] Helicase conserved C-terminal domain; [PTHR10799:SF49] DNA EXCISION REPAIR PROTEIN ERCC-6 (COCKAYNE SYNDROME PROTEIN CSB); [K10841] DNA excision repair protein ERCC-6120.520.5865
49 Mapoly0041s0121 [PTHR13989] REPLICATION PROTEIN A-RELATED; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain122.960.5752
50 Mapoly0113s0019 [KOG2354] RNA Polymerase C (III) 37 kDa subunit; [GO:0005634] nucleus; [PTHR12069] DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE (RNA POLYMERASE III SUBUNIT 5); [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04801] Sin-like protein conserved region123.840.5982
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